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Detail for ZS11_A09G60410.t1

Genome:
ZS11: ZS11_A09G60410.t1
ZS11_v0: BnaA09T0592700ZS
WE: WE_A09G58810.t1
WE_v0: BnaA09T0560000WE
Darmor: A09p57560.1_BnaDAR
BH: BnaA09T577100BH
Quinta: BnaA09T0568000QU
ZS2: BnaA09T498100ZS2
SW: BnaA09T556700SW
Express61: A09p045600.1_BnaEXP
Xiaoyun: BnaA09G0571900XY
P202: BnaA09G052030P202.1
BL: BnaA09T577100BH
TA: BnaA09T494700TA
Da-Ae: Not available
RB: BnaA09T530000RB
No2127: BnaC08T0397300NO
P130: BnaA09G052600P130.2
Length: 480
KOG ID: KOG1284
KOG E-value: Not available
KOG Score: 800.0
KOG Annotation: Coenzyme transport and metabolism
Biological Process: GO:0009231(riboflavin biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008686(3,4-dihydroxy-2-butanone-4-phosphate synthase activity)
KEGG Ortholog: K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
NR Protein: XP_013664138.1
NR E-value: 2.200000e-274
NR Score: 949.5
NR Annotation: XP_013664138.1 monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic [Brassica napus]
SwissProt Protein: Q6NLQ7|RIBA2_ARATH
SwissProt E-value: Not available
SwissProt Score: 847.0
SwissProt Annotation: Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA2 PE=1 SV=1
CDS Sequence (1463 bp)
ATGGCGTCCCTCAATCTTCGATGCGACTCAACGCATCTTCTTCCCTCGCGTCATGTTACGAGGACAAGAC
CGTTTAGGAAGACATGGATGTGTCCTAAGATCATACCAAGGAGATTAAACAATGTTAGAATGGGAGTGAT
GATGTCTGAGGAAGGAGATGTCTTCTCTTCCTCCTCCTCCAAGAGTAATAATGGATCAATGGGGATCGAG
TTGCAGCCGGATTTGGTTTCTTTCGGAACGTTAGCAGCAGAAATGATTCCCACGACAATGGTTTCGTCTG
AAGTTGAGGATGAAGAGTTTGATCTTGATCGTCCTACTGATGGATTTGCATCTATTCCGCAAGCTATTGA
GGATATTCGTCAGGGCAAGTTGGTGATTGTTGTGGATGATGAGGATAGAGAGAATGAAGGAGATTTGATA
ATGGCTGCATCGTTGGTGACACCTGAAGCTATGGCTTTTGTGGTGAAGCATGGGACTGGAATTGTGTGTG
TGAGTATGAAAGGTGAAGACTTGGAGAGGTTAGAGCTTCCTTTAATGGTGACGCGGAAGGAGAACGAGGA
GAAACTCCGCACGGCCTTCACGGTTTCTGTGGATGCTAAGAACGGAACATCGACAGGTGTCTCGGCTCGT
GACAGGGCACAGACGATATTAGCACTTGCATCAAAAGATTCAAAGCCTCAGGATTTCAACCGTCCTGGTC
ATATCTTTCCTTTGAGATACAGAGAAGGCGGTGTTCTTAAAAGAGCTGGGCACACAGAAGCCTCTGTTGA
TCTAACTGTGTTAGCTGGTTTGGAACCTGTTTCTGTTTTGTGTGAGATTGTAGATGACGATGGTTCCATG
GCTAGGTTACCAAGACTCCGCCAGTTTGCTCAAGAGAACAATTTGAAAATCATCTCAATCGCCGATCTAA
TCAGATACCGAAGGAAAAGAGAGAGACTGGTGGAGTTTACTGCGGTTGCGCCTATACCGACAATGTGGGG
ACCATTTAAAGCATACTGCTTCAAGTCATTGCTTGATGGAGTTGAGCACATTGCAATGGTCAAAGGAGAA
GTCGGAGATGGGAAGGATGTTCTGGTGAGAGTACACGCGGAATGTATCACAGATGATATATTCGGAAACG
GCTCTGGTGGGAAGCAATTAGCAATCGCTATGAGACAGATTGAAGAAACTGGGAGAGGTGTGTTTGTGTA
CTTACGTGGTCCTGAAGCTAAAGGCATTGACCTAACACACAAGCCTCGTACTTACGACAACACTTCAGAT
CAAACCGAGGGTGTTTCATTCCCCGTTGCTTCAAGAGAATACGGCATTGGAGCACAGATACTGAGGGATC
TTGGAGTTAGAACGATGAAGGTGATGACGAATAATCCAGCTCATTATGTTGGACTTAAAGGCTATGGTTT
ATCAATCACCGGTAAGGTTCCACTCATTAGTCCCAGCTCCTAA
Upstream Sequence
ATGGCGTCCCTCAATCTTCGATGCGACTCAACGCATCTTCTTCCCTCGCGTCATGTTACGAGGACAAGAC
CGTTTAGGAAGACATGGATGTGTCCTAAGATCATACCAAGGAGATTAAACAATGTTAGAATGGGAGTGAT
GATGTCTGAGGAAGGAGATGTCTTCTCTTCCTCCTCCTCCAAGAGTAATAATGGATCAATGGGGATCGAG
TTGCAGCCGGATTTGGTTTCTTTCGGAACGTTAGCAGCAGAAATGATTCCCACGACAATGGTTTCGTCTG
AAGTTGAGGATGAAGAGTTTGATCTTGATCGTCCTACTGATGGATTTGCATCTATTCCGCAAGCTATTGA
GGATATTCGTCAGGGCAAGTTGGTGATTGTTGTGGATGATGAGGATAGAGAGAATGAAGGAGATTTGATA
ATGGCTGCATCGTTGGTGACACCTGAAGCTATGGCTTTTGTGGTGAAGCATGGGACTGGAATTGTGTGTG
TGAGTATGAAAGGTGAAGACTTGGAGAGGTTAGAGCTTCCTTTAATGGTGACGCGGAAGGAGAACGAGGA
GAAACTCCGCACGGCCTTCACGGTTTCTGTGGATGCTAAGAACGGAACATCGACAGGTGTCTCGGCTCGT
GACAGGGCACAGACGATATTAGCACTTGCATCAAAAGATTCAAAGCCTCAGGATTTCAACCGTCCTGGTC
ATATCTTTCCTTTGAGATACAGAGAAGGCGGTGTTCTTAAAAGAGCTGGGCACACAGAAGCCTCTGTTGA
TCTAACTGTGTTAGCTGGTTTGGAACCTGTTTCTGTTTTGTGTGAGATTGTAGATGACGATGGTTCCATG
GCTAGGTTACCAAGACTCCGCCAGTTTGCTCAAGAGAACAATTTGAAAATCATCTCAATCGCCGATCTAA
TCAGATACCGAAGGAAAAGAGAGAGACTGGTGGAGTTTACTGCGGTTGCGCCTATACCGACAATGTGGGG
ACCATTTAAAGCATACTGCTTCAAGTCATTGCTTGATGGAGTTGAGCACATTGCAATGGTCAAAGGAGAA
GTCGGAGATGGGAAGGATGTTCTGGTGAGAGTACACGCGGAATGTATCACAGATGATATATTCGGAAACG
GCTCTGGTGGGAAGCAATTAGCAATCGCTATGAGACAGATTGAAGAAACTGGGAGAGGTGTGTTTGTGTA
CTTACGTGGTCCTGAAGCTAAAGGCATTGACCTAACACACAAGCCTCGTACTTACGACAACACTTCAGAT
CAAACCGAGGGTGTTTCATTCCCCGTTGCTTCAAGAGAATACGGCATTGGAGCACAGATACTGAGGGATC
TTGGAGTTAGAACGATGAAGGTGATGACGAATAATCCAGCTCATTATGTTGGACTTAAAGGCTATGGTTT
ATCAATCACCGGTAAGGTTCCACTCATTAGTCCCAGCTCCTAATTGTGTGACTCTATCAATCTCTGGTAA
CGTTGGTCTTCTACGAGTGACAAGTATGTTATGGTTTTGACGCCTAAACTATCATTAGAAAAAGAAAAAA
AAAAACTATCATTAGAAAAATGGTAATCTTTTTTTACGAATTTTACTTGAGTTCTTTGTTTTTGTATCGG
AAGTATCATG
Downstream Sequence
GGTAATCTCAGTTTGCGTGTGTCTCTCAATTTGAATTGATTGGTCGAGTCGCTATCTCTT
AGCTGTGTTCGCGTGCGTTTGTGCTATATAGTCGTTGCTTGCGTGTCTCAATTTGAATTT
GATAGTTTCGATAAGGTTTGGCTGTTTGATTGGTTGAATCGCGATAATTCGAATCGCTCT
GTGTGCGCGTTTGCGTTTCTGCAATTGAAACGCGATTTAAGTTTAAGGCCTTAACGAGCA
TGTGTTTTTTTTTCTTCAGTCATGTTACGAGGACAAGACCGTTTAGGAAGACATGGATGT
GTCCTAAGATCATACCAAGGAGATTAAACAATGTTAGAATGGGAGTGATGATGTCTGAGG
AAGGAGATGTCTTCTCTTCCTCCTCCTCCAAGAGTAATAATGGATCAATGGGGATCGAGT
TGCAGCCGGATTTGGTTTCTTTCGGAACGTTAGCAGCAGAAATGATTCCCACGACAATGG
TTTCGTCTGAAGTTGAGGATGAAGAGTTTGATCTTGATCGTCCTACTGATGGATTTGCAT
CTATTCCGCAAGCTATTGAGGATATTCGTCAGGGCAAGGTTTGTATTAGTAGCACAAGAG
TGTTAGAAGGAGAGGAGGATGTTTTAAGTGATTGTTTTGTGTTTTTTGTAGTTGGTGATT
GTTGTGGATGATGAGGATAGAGAGAATGAAGGAGATTTGATAATGGCTGCATCGTTGGTG
ACACCTGAAGCTATGGCTTTTGTGGTGAAGCATGGGACTGGAATTGTGTGTGTGAGTATG
AAAGGTGAAGACTTGGAGAGGTTAGAGCTTCCTTTAATGGTGACGCGGAAGGAGAACGAG
GAGAAACTCCGCACGGCCTTCACGGTTTCTGTGGTATGTACAAAACCTTTTGTTGTTTTT
GTTACGACTCTGTTAGTGTTCTGATGAAAAGAATGTTGTCAGGATGCTAAGAACGGAACA
TCGACAGGTGTCTCGGCTCGTGACAGGGCACAGACGATATTAGCACTTGCATCAAAAGAT
TCAAAGCCTCAGGATTTCAACCGTCCTGGTCATATCTTTCCTTTGAGATACAGAGAAGGC
GGTGTTCTTAAAAGAGCTGGGCACACAGAAGCCTCTGTTGATCTAACTGTGTTAGCTGGT
TTGGAACCTGTTTCTGTTTTGTGTGAGATTGTAGATGACGATGGTTCCATGGCTAGGTTA
CCAAGACTCCGCCAGTTTGCTCAAGAGAACAATTTGAAAATCATCTCAATCGCCGATCTA
ATCAGGTACAATACAAACACTTCAAGATCAGCTACTTACAACTCTTAGTTCTGAAGTTAC
TGATGTTCTTCCTCTTTGTTTGGTAGATACCGAAGGAAAAGAGAGAGACTGGTGGAGTTT
ACTGCGGTTGCGCCTATACCGACAATGTGGGGACCATTTAAAGCATACTGCTTCAAGTCA
TTGCTTGATGGAGTTGAGCACATTGCAATGGTCAAAGTAATAGAACCAAACCCTCATTTG
AAACTCATCTCTTTGTATCTTGTGCTAAACTTCGATAAGAATCACAGGGAGAAGTCGGAG
ATGGGAAGGATGTTCTGGTGAGAGTACACGCGGAATGTATCACAGATGATATATTCGGAA
ACGGCTCTGGTGGGAAGCAATTAGCAATCGCTATGAGACAGATTGAAGAAACTGGGAGAG
GTGTGTTTGTGTACTTACGTGGTCCTGAAGCTAAAGGCATTGACCTAACACACAAGCCTC
GTACTTACGACAACACTTCAGATCAAACCGAGGGTGTTTCATTCCCCGTTGCTTCAAGAG
AATACGGCATTGGAGCACAGGTAATAAACTAAACTCGAATCTTTTCACTGTTTTTATTTA
ATATCTGCAAAATTTTAAAATCGAAAATTGGATGATGCAGATACTGAGGGATCTTGGAGT
TAGAACGATGAAGGTGATGACGAATAATCCAGCTCATTATGTTGGACTTAAAGGCTATGG
TTTATCAATCACCGGTAAGG
Pro Sequence
MASLNLRCDSTHLLPSRHVTRTRPFRKTWMCPKIIPRRLNNVRMGVMMSE
EGDVFSSSSSKSNNGSMGIELQPDLVSFGTLAAEMIPTTMVSSEVEDEEF
DLDRPTDGFASIPQAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEA
MAFVVKHGTGIVCVSMKGEDLERLELPLMVTRKENEEKLRTAFTVSVDAK
NGTSTGVSARDRAQTILALASKDSKPQDFNRPGHIFPLRYREGGVLKRAG
HTEASVDLTVLAGLEPVSVLCEIVDDDGSMARLPRLRQFAQENNLKIISI
ADLIRYRRKRERLVEFTAVAPIPTMWGPFKAYCFKSLLDGVEHIAMVKGE
VGDGKDVLVRVHAECITDDIFGNGSGGKQLAIAMRQIEETGRGVFVYLRG
PEAKGIDLTHKPRTYDNTSDQTEGVSFPVASREYGIGAQILRDLGVRTMK
VMTNNPAHYVGLKGYGLSITGKVPLISPSS
mRNA Sequence
ATGGCGTCCCTCAATCTTCGATGCGACTCAACGCATCTTCTTCCCTCGCGTCATGTTACGAGGACAAGAC
CGTTTAGGAAGACATGGATGTGTCCTAAGATCATACCAAGGAGATTAAACAATGTTAGAATGGGAGTGAT
GATGTCTGAGGAAGGAGATGTCTTCTCTTCCTCCTCCTCCAAGAGTAATAATGGATCAATGGGGATCGAG
TTGCAGCCGGATTTGGTTTCTTTCGGAACGTTAGCAGCAGAAATGATTCCCACGACAATGGTTTCGTCTG
AAGTTGAGGATGAAGAGTTTGATCTTGATCGTCCTACTGATGGATTTGCATCTATTCCGCAAGCTATTGA
GGATATTCGTCAGGGCAAGTTGGTGATTGTTGTGGATGATGAGGATAGAGAGAATGAAGGAGATTTGATA
ATGGCTGCATCGTTGGTGACACCTGAAGCTATGGCTTTTGTGGTGAAGCATGGGACTGGAATTGTGTGTG
TGAGTATGAAAGGTGAAGACTTGGAGAGGTTAGAGCTTCCTTTAATGGTGACGCGGAAGGAGAACGAGGA
GAAACTCCGCACGGCCTTCACGGTTTCTGTGGATGCTAAGAACGGAACATCGACAGGTGTCTCGGCTCGT
GACAGGGCACAGACGATATTAGCACTTGCATCAAAAGATTCAAAGCCTCAGGATTTCAACCGTCCTGGTC
ATATCTTTCCTTTGAGATACAGAGAAGGCGGTGTTCTTAAAAGAGCTGGGCACACAGAAGCCTCTGTTGA
TCTAACTGTGTTAGCTGGTTTGGAACCTGTTTCTGTTTTGTGTGAGATTGTAGATGACGATGGTTCCATG
GCTAGGTTACCAAGACTCCGCCAGTTTGCTCAAGAGAACAATTTGAAAATCATCTCAATCGCCGATCTAA
TCAGATACCGAAGGAAAAGAGAGAGACTGGTGGAGTTTACTGCGGTTGCGCCTATACCGACAATGTGGGG
ACCATTTAAAGCATACTGCTTCAAGTCATTGCTTGATGGAGTTGAGCACATTGCAATGGTCAAAGGAGAA
GTCGGAGATGGGAAGGATGTTCTGGTGAGAGTACACGCGGAATGTATCACAGATGATATATTCGGAAACG
GCTCTGGTGGGAAGCAATTAGCAATCGCTATGAGACAGATTGAAGAAACTGGGAGAGGTGTGTTTGTGTA
CTTACGTGGTCCTGAAGCTAAAGGCATTGACCTAACACACAAGCCTCGTACTTACGACAACACTTCAGAT
CAAACCGAGGGTGTTTCATTCCCCGTTGCTTCAAGAGAATACGGCATTGGAGCACAGATACTGAGGGATC
TTGGAGTTAGAACGATGAAGGTGATGACGAATAATCCAGCTCATTATGTTGGACTTAAAGGCTATGGTTT
ATCAATCACCGGTAAGGTTCCACTCATTAGTCCCAGCTCCTAATTGTGTGACTCTATCAATCTCTGGTAA
CGTTGGTCTTCTACGAGTGACAAGTATGTTATGGTTTTGACGCCTAAACTATCATTAGAAAAAGAAAAAA
AAAAACTATCATTAGAAAAATGGTAATCTTTTTTTACGAATTTTACTTGAGTTCTTTGTTTTTGTATCGG
AAGTATCATG