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Detail for ZS11_A09G62470.t1

Genome:
ZS11: ZS11_A09G62470.t1
ZS11_v0: BnaC08T0249400ZS
WE: WE_A09G60900.t1
WE_v0: BnaA08T0232100WE
Darmor: A09p59630.1_BnaDAR
BH: BnaA09T596700BH
Quinta: BnaA08T0246400QU
ZS2: BnaC05T154500ZS2
SW: BnaC05T163500SW
Express61: C05p015050.1_BnaEXP
Xiaoyun: BnaC05G0153200XY
P202: BnaA08G019010P202.5
BL: BnaA09T596700BH
TA: BnaC05T160200TA
Da-Ae: Not available
RB: BnaC05T165500RB
No2127: BnaA08T0222300NO
P130: BnaC05G015040P130.1
Length: 97
KOG ID: KOG1223
KOG E-value: 1.390000e-23
KOG Score: 94.4
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013715406.1
NR E-value: 3.000000e-18
NR Score: 96.3
NR Annotation: XP_013715406.1 isochorismate synthase 2, chloroplastic [Brassica napus]
SwissProt Protein: Q9M9V6|ICS2_ARATH
SwissProt E-value: 5.750000e-23
SwissProt Score: 94.7
SwissProt Annotation: Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS2 PE=2 SV=2
CDS Sequence (298 bp)
ATGTTTACTGGACCTGTGGGGCGTTTTGGTGGTGGAGGGAGTGAATTTTCTGTAGGCATAAGATATGCTT
TAGTCAAAAAGGGGTTTTGGAGCCTTGATATCTATTCAGGAAAAGGAATAGTTTCAGGAAGTGATTCAGC
CTCCGAGTGGAACGAGCTTGATCTTAAGACCTTGTCCTTAAGACATCAATGGCATTTCCATGTCTTTATG
CAATCTGAAAACATATTATTATGTGTTTCTCTGCAGTTCACTAAATCACTTGAACATGAGCTAGCTTTGC
AGCCGATCAACTAA
Upstream Sequence
ATGTTTACTGGACCTGTGGGGCGTTTTGGTGGTGGAGGGAGTGAATTTTCTGTAGGCATAAGATATGCTT
TAGTCAAAAAGGGGTTTTGGAGCCTTGATATCTATTCAGGAAAAGGAATAGTTTCAGGAAGTGATTCAGC
CTCCGAGTGGAACGAGCTTGATCTTAAGACCTTGTCCTTAAGACATCAATGGCATTTCCATGTCTTTATG
CAATCTGAAAACATATTATTATGTGTTTCTCTGCAGTTCACTAAATCACTTGAACATGAGCTAGCTTTGC
AGCCGATCAACTAA
Downstream Sequence
GGTGAGAGTGAGTTATTTTTTTTTACTTATAACAACTTTACTCACTGTCGCAAACTTATT
GCATGTATTGCATTGCATCTATCTGATCTTTTTCATTTGTGTTTCCAGGGGTTTTGGAGC
CTTGATATCTATTCAGGAAAAGGAATAGTTTCAGGAAGTGATTCAGCCTCCGAGTGGAAC
GAGCTTGATCTTAAGACCTTGTCCTTAAGACATCAATGGCATTTCCATGTCTTTATGCAA
TCTGAAAACATATTATTATGTGTTTCTCTGCAGTTCACTAAATCACTTGAACATGAGCTA
GCTTTGCAGCCGATCAACTAAAAATGTTTAATAATCTATCTATAATTAAATTGCTTTGTA
TCATTCATTGTGTGTATCTACATTACATCAAATTATTTTTTGTTCTTTTTTGTTTTTAGC
TTTCTATTGTCCAGGGCTGGTCCTGGGGCATACTAAGTGATACATTCGCAACAGACTTCC
AAATTTTTTGAAAAAAATTACATACAAATAAACTTAAAAAAATATTTTAAACCTCTAAAT
TTGTAAAAAAAAAATATATATATAAACATGGCCACAAACTCCCAAAATTTCAGGACCGGT
CCAGCTATTGTCCAGTTACCGACCCAATAATTGGTCAAGTCCCGACGCACCTACGTACGT
TATGATCCCAAGCTGACGTATTTCTCCACCTCCACAAAAGAATAAGCTTCAAGACATATA
TAATATATATTTTTGTGCACAATATAATATTTTATTATTAATCGAACATAATCAATAGTG
CTAACGAAAAGTTACTTTCCACATATTGTTTCAGAACGTGATTTGTTTCTTTTTAACTTG
ATTTTTGGGCTAATCTAATCAAAGGGAATTTTGTTTATGATGTGAAAGAGAAAGATCGAA
TCTTTGTTTACCCTTATAATCTAAAATATGATCCAAACGTTAATCTGAATTTCATTCTCC
CATGAGTCATATTCTCTTCCAGTTGTTCTTACAATCAGACCTCACTATAATATTAAATGC
TTTATTCTTCTAGCCCTCACTTGAAATAGTAAATGAACGATGAGACTAAGTATAAAACGT
TAAAATATACAAATTGGCGTATGTATTTTTGGTAGTTATAGAAAAGTTCAAGATACATAC
ATCTCTTTTTCATATTGAATTCCCATTAACAAAACAAGGTAGTAGGAAAAAAAACAAAAC
AAAACAAGGTAGCATACAAAGAGAGATACATTTGTAGAATCCAAGGCCTGGAGACAAAGC
CCCAAAATGTTCAAGATACAACTCTAATTCAGTCGTTTTTATAACGTAGATAATTCATAT
ATGTAAATGAACCATTTTCGGTAATACATGTTCATAAGAATACGTAAATTAGTTTACCAC
ACACAAATATACAACTTACCTATTGAGTGTTGAGGTAAGGAACAATAACATTTAAGCGTG
CAAATGAGAAGTAAAGAGACGATCATTGCGATCAAAATGATTTTTCTATAAAAATGCATG
CATGATGAAAGTTGAAAAGAAAGAATTATTGAGAGACAAAAATAAAGCTGAAAAGAAAAA
GTAACGTTAACTAGGAGATTCCTTTTTCATGATTTGACAAATTTCAAAGTAGAAAATAAA
TGTTGTCAGCTTTATTGAATTCAAGTAAAAACCAAACGACAATAAATATTTCTGTAATCC
TACTTCCATATATTAACAAGCCTTTCAATTCATTGTCACATGTAGGTTTCTCGTTTAACT
TTTTTTAGTAAAACATGTTACGGAAAGTAATTGATAATTTCGTTGTCCATGTTACAGATA
AAAAGAATGAATTCTTGATTGCTACTTACTGTTAAGAAAAACGAGTTGAGAATATAAAAC
AAGCAAAACAAATATTAGCCATGAGAACAAATAAATTAATAAGATATCCAAACTGTAATC
GTTTTTCTTTTGATAAAAAATGTGCGTTTGTTGAACCAACTCCGGGCCTACTTTTGATAA
AGTTGGGTCTTTTCAGTCCA
Pro Sequence
MFTGPVGRFGGGGSEFSVGIRYALVKKGFWSLDIYSGKGIVSGSDSASEW
NELDLKTLSLRHQWHFHVFMQSENILLCVSLQFTKSLEHELALQPIN
mRNA Sequence
ATGTTTACTGGACCTGTGGGGCGTTTTGGTGGTGGAGGGAGTGAATTTTCTGTAGGCATAAGATATGCTT
TAGTCAAAAAGGGGTTTTGGAGCCTTGATATCTATTCAGGAAAAGGAATAGTTTCAGGAAGTGATTCAGC
CTCCGAGTGGAACGAGCTTGATCTTAAGACCTTGTCCTTAAGACATCAATGGCATTTCCATGTCTTTATG
CAATCTGAAAACATATTATTATGTGTTTCTCTGCAGTTCACTAAATCACTTGAACATGAGCTAGCTTTGC
AGCCGATCAACTAA