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Detail for ZS11_A09G62540.t1

Genome:
ZS11: ZS11_A09G62540.t1
ZS11_v0: BnaA09T0612200ZS
WE: WE_A09G61000.t1
WE_v0: BnaC08T0415200WE
Darmor: A09p59720.1_BnaDAR
BH: BnaA09T597800BH
Quinta: BnaC05T0115700QU
ZS2: BnaA09T517300ZS2
SW: BnaC05T160100SW
Express61: Not available
Xiaoyun: BnaC08G0457100XY
P202: BnaC08G070290P202.2
BL: BnaA09T597800BH
TA: BnaC05T157700TA
Da-Ae: Not available
RB: BnaC05T163400RB
No2127: BnaA09T0544600NO.2
P130: BnaA09G054340P130.1
Length: 162
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009773(photosynthetic electron transport in photosystem I)
Cellular Component: GO:0009535(chloroplast thylakoid membrane),GO:0010598(NAD(P)H dehydrogenase complex (plastoquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: VDC63737.1
NR E-value: 2.000000e-75
NR Score: 287.0
NR Annotation: VDC63737.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q8RXS1|PNSB4_ARATH
SwissProt E-value: 1.260000e-97
SwissProt Score: 281.0
SwissProt Annotation: Photosynthetic NDH subunit of subcomplex B 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB4 PE=2 SV=1
CDS Sequence (495 bp)
ATGTCCCGTCTTACTCGAGTTACTCGCCTAAGCAGTTTTCAGGGACATCTCACGGGTGGCTCTCTGGAAA
TGAAACAGAATGAGAAGAGGGAAAAGAATGTGATGAGAGGAAGCTTATGTGTAAGAAAGGCATTGCCACA
TGATTTGCCACTAATGGCTGTGATGGTTCAACAAATTGAAGGGATGCGTGATATCATTACAGAGAAACAC
GTGTGGCATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGTTCTACATCATGTTCACTTGTTGGGGAT
GTCTGTACTTTGGTTCCGCAAAAGATCCATTCTATGACTCGGAGGAGTACCGTGGAGATGGAGGTGATGG
AACCGGATATTGGGTCTATGAAACTCAAGAAGACATAGAAGAGAAAGCAAGAGCAGAGTTATGGCGTGAA
GAACTTATCGAAGAAATTGAACAGAAAGTTAGTGGGTTAAGAGAGCTCGAAGAAGCTGTTACCAAGTAG
Upstream Sequence
ATCTAATCTTAAAGTTAAAATAACAATAGAAAAGGGTTGCGACAACACTGTGTCTTATATCTCCTCCATT
GCCACTTATCAAAGAAGTATCAATGGCTGAAGCATTCACCTTCACAAATCTTCATGTCCCGTCTTACTCG
AGTTACTCGCCTAAGCAGTTTTCAGGGACATCTCACGGGTGGCTCTCTGGAAATGAAACAGAATGAGAAG
AGGGAAAAGAATGTGATGAGAGGAAGCTTATGTGTAAGAAAGGCATTGCCACATGATTTGCCACTAATGG
CTGTGATGGTTCAACAAATTGAAGGGATGCGTGATATCATTACAGAGAAACACGTGTGGCATCTAAGTGA
TAAAGCCATCAAGAATGTCTATTTGTTCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTTGGTTCC
GCAAAAGATCCATTCTATGACTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACCGGATATTGGGTCT
ATGAAACTCAAGAAGACATAGAAGAGAAAGCAAGAGCAGAGTTATGGCGTGAAGAACTTATCGAAGAAAT
TGAACAGAAAGTTAGTGGGTTAAGAGAGCTCGAAGAAGCTGTTACCAAGTAGACAACTAACTTGTAAATC
ATAAACAAATTATGCACATATATTTTATTTCTTTGATAACGGTCATAAACCACTCTTCCATTTATATAAT
ATATATGTTATCTGTATCTTTGTTGTGTTGTGTGTTTCTGAATCATGGAATGAACATGTTAAGAGCAATC
GTCTCCTTCAGATTTTTGTCTCAGTTATATAAATAAATTAATAATTACTTAGTTGGGGCTAA
Downstream Sequence
GGTCCATATTTAACTATGTTCATATACAGCGAAGTGTTTCAATAAAAAATATACTAAGAA
AGGGGTTGTTTTTTTTTGCTGTGTAGCCTAAGCAGTTTTCAGGGACATCTCACGGGTGGC
TCTCTGGAAGTCTCTAATTTAAAAATCTGATTGCTCTTGTTATGAATTTTACGTTTTATA
ATTCTGAAAAACAACTAGATGAAACAGAATGAGAAGAGGGAAAAGAATGTGATGAGAGGA
AGCTTATGTGTAAGAAAGGCATTGCCACATGATTTGCCACTAATGGCTGTGATGGTTCAA
CAAATTGAAGGGATGCGTGATATCATTACAGAGAAACACGTGTGGCATCTAAGTGATAAA
GCCATCAAGAATGTCTGTAAGTAGCAAACTTTTTGGTGTTCATTAAGACAAGATTAAGGT
CTTTTTCCTTTAGTTTGTTTTGTGGTTGATACATGGGTCTTGATCTTGCTGGCAGATTTG
TTCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTTGGTTCCGCAAAAGTAAGGAAC
AAAAAAACTCCACTCAAATCAAATCTTTTGATCTCCATTTGCTGCATTTGGCATCTTAAC
TACTTTTTCTTTAATATATTTATGGTGCATATATAGGATCCATTCTATGACTCGGAGGAG
TACCGTGGAGATGGAGGTGATGGAACCGGATATTGGGTCTATGAAACTGTACGTATCTCT
CTTTCTAATATTAGAAACTTATAAATTATTGTTTGGGATGTTGTCATGGCCTATCCCACA
CTGGTCGTTACAGAGCTTCACCCTGTAGACCGGTTTGACCACTCTATATGTCTAAGTAAA
GTATGTAGATGGCTCTAGGTTTGCCTTTAGGTGTCACAGTCTTAAGCATTTACGTTTGTT
TATTTGCGTTTACATTAATGCTTATCAAGAAAAATTTTGGAGCAATTATGCTTATCATTT
TTTCCCAATTTGAACCTACAAACTTAATTATCTTTACAAACTAGTATTTAAAAATTATAA
ACGTCAAACACAAACATAATAAAACATTTTCATTTATGCTGGTATATATGTTTAGACTTG
ACAAAACATTTGATAAAAATCGAATTTCCTACTTATATAAATTTTGATTCCTGGTAACAG
TGAAATCAAGGCTTAACAGGTTTGATGTAGTTTTGGTAACATTTTTTTTGGATAAAATGT
GAATATTATACACAAATGGAACAAGAGTTCTTTTACAATGCTTGAGAAGCAAGAAGTTAC
ATATGGCTCAAAAACAAAATATAGATAGGTTTGATTAGGGGTGGGCGTTCGGGTATCCGT
TCGGGTTCGGGTCGGGTATTTCGGATTTTCGGATATTTCGGTATAGAGGTGTAGAACCCG
TTCGGATATTTCTGTACTTCGGGTCGGGTTCGGGTATTTTTAGTTCGGGTTCGGTTATTT
CGGATCGGGTTCGGATATTTAGATTTTGAAAAAAAACAAAATTAAATTTTCATTTTTCAA
ATTTCTTGTATTTAAAAATATAACTTTCACTTCACTAATCTTTTATTTTTAATAGATTGA
ATGGTTAATAGATTTGGACATAACATTTTGAAACTAAAAAACATTAATTTGATTATTGTT
TTAAATTTTGGATGTAACTTTTGTTAATTCTTGAAATAAAAATTTGACATGTATTTTAAG
TGAGTAGCAAATCATTTTCTCCGTAATTGTATGTATATCTTATGAACTTAAAATATGTGT
AGTATCAATATAAATACTTTATATAAAATGGGAGATGTAAACTAGAAATATAAGGTTAAT
TATACATATGTTCGGTTATTTTCGGATATCCATTCGGGTTCGGGTATTACCCGTTCGGGT
TCGGATATCCAATCTCTCTTAATTCAATACCCGTTCGGATATTTTGCTACTTCGGTTCGG
ATTTCGGTTCGGGTTTTTCGGATCGGGTTCGGGTGCCATTTCGGATATCGGGTAAAGTGC
CCACCCCTAGGTTTGATGTA
Pro Sequence
MSRLTRVTRLSSFQGHLTGGSLEMKQNEKREKNVMRGSLCVRKALPHDLP
LMAVMVQQIEGMRDIITEKHVWHLSDKAIKNVYLFYIMFTCWGCLYFGSA
KDPFYDSEEYRGDGGDGTGYWVYETQEDIEEKARAELWREELIEEIEQKV
SGLRELEEAVTK
mRNA Sequence
ATCTAATCTTAAAGTTAAAATAACAATAGAAAAGGGTTGCGACAACACTGTGTCTTATATCTCCTCCATT
GCCACTTATCAAAGAAGTATCAATGGCTGAAGCATTCACCTTCACAAATCTTCATGTCCCGTCTTACTCG
AGTTACTCGCCTAAGCAGTTTTCAGGGACATCTCACGGGTGGCTCTCTGGAAATGAAACAGAATGAGAAG
AGGGAAAAGAATGTGATGAGAGGAAGCTTATGTGTAAGAAAGGCATTGCCACATGATTTGCCACTAATGG
CTGTGATGGTTCAACAAATTGAAGGGATGCGTGATATCATTACAGAGAAACACGTGTGGCATCTAAGTGA
TAAAGCCATCAAGAATGTCTATTTGTTCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTTGGTTCC
GCAAAAGATCCATTCTATGACTCGGAGGAGTACCGTGGAGATGGAGGTGATGGAACCGGATATTGGGTCT
ATGAAACTCAAGAAGACATAGAAGAGAAAGCAAGAGCAGAGTTATGGCGTGAAGAACTTATCGAAGAAAT
TGAACAGAAAGTTAGTGGGTTAAGAGAGCTCGAAGAAGCTGTTACCAAGTAGACAACTAACTTGTAAATC
ATAAACAAATTATGCACATATATTTTATTTCTTTGATAACGGTCATAAACCACTCTTCCATTTATATAAT
ATATATGTTATCTGTATCTTTGTTGTGTTGTGTGTTTCTGAATCATGGAATGAACATGTTAAGAGCAATC
GTCTCCTTCAGATTTTTGTCTCAGTTATATAAATAAATTAATAATTACTTAGTTGGGGCTAA