SEARCH

DETAIL

Detail for ZS11_A10G11180.t1

Genome:
ZS11: ZS11_A10G11180.t1
ZS11_v0: BnaA10T0093500ZS
WE: WE_A10G11420.t1
WE_v0: BnaA10T0091200WE
Darmor: A10p10290.1_BnaDAR
BH: BnaA10T093200BH
Quinta: BnaA10T0085600QU
ZS2: BnaA10T089900ZS2
SW: BnaA10T096500SW
Express61: A10p008250.1_BnaEXP
Xiaoyun: BnaA10G0092200XY
P202: BnaA10G008150P202.1
BL: BnaA10T093200BH
TA: BnaA10T090800TA
Da-Ae: Not available
RB: BnaA10T092600RB
No2127: BnaC09T0294700NO
P130: BnaA10G011190P130.1
Length: 169
KOG ID: KOG3365
KOG E-value: 1.210000e-113
KOG Score: 320.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022904(respiratory electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03949 NDUFA5; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
NR Protein: VDD17396.1
NR E-value: 2.300000e-93
NR Score: 346.7
NR Annotation: VDD17396.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q9FLX7|NDUA5_ARATH
SwissProt E-value: 5.150000e-113
SwissProt Score: 320.0
SwissProt Annotation: Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1
CDS Sequence (517 bp)
ATGTACCTCCGGTCAATCGGACGGCCATTATTGGCTAAAGTGAAGCAGACGACGGGGATCGTCGGGCTTG
ACGTTGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACACGAAAACCCTGAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCTGTCGAATCGTTCACGCGCCACCGTCTCAATGTCTGCAAGGAA
GAGGAAGACTGGGAGGCAATCGAGAAGCGTCTTGGTTGCGGCCAAGTGGAAGAGCTCATCGAAGAGGCAC
AAGATGAGCTCACACTCATTGGGAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAATGATGCACCGATCCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTCCCTGAA
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCCACCG
ATCCCCTGTTGAAGGAGTAA
Upstream Sequence
ATGTACCTCCGGTCAATCGGACGGCCATTATTGGCTAAAGTGAAGCAGACGACGGGGATCGTCGGGCTTG
ACGTTGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACACGAAAACCCTGAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCTGTCGAATCGTTCACGCGCCACCGTCTCAATGTCTGCAAGGAA
GAGGAAGACTGGGAGGCAATCGAGAAGCGTCTTGGTTGCGGCCAAGTGGAAGAGCTCATCGAAGAGGCAC
AAGATGAGCTCACACTCATTGGGAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAATGATGCACCGATCCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTCCCTGAA
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCCACCG
ATCCCCTGTTGAAGGAGTAA
Downstream Sequence
GTTCGTGTGTTCTTACCATTATCATGCGGTCTCATTTGTTATTATAGAATCTGAATCTAG
AGGATTAGTGGTTCATTAGGTAGAAAATTAATCTGAACACAGAGCATTGCAAAAGTCGAG
CTTTTTGTATTGTTTTATGTGTCATTGGTGAAAATTTGCTTCAGTGCCACATAGGCTTGG
TTAGCCCTGGACAATTGGTTTCGGTTTACTTTTTGGCGGATATAGAATTATAGATTGTTT
CGGTTCAGTTCCAGTAACAAGGTTGGCAATTGGCTAGAATCTGAGAAAAAATTGAATTCA
GTTCGATTCCAGTTCTGGTTTTCGGTAAAAAAAATTTGCTGATTAGGGTATAATTGTGGG
ATAATGTGTTTCTTTTTGGATTAAATATTGGCCTATTTGGATAAAGATTTTTGGGAAAAC
AATTTTCAAAACTAAATATATGTAATATGTTTTAGATATATGAATTGTATTTTAGATATT
TAGATACCCATTTGGTTTTTATTTTGGATAGTTTTCGGTTTTCATAGAAAAATAGAAATC
CTTTCAGGTTTTCATAGAAAAATAGAAATCGTTTGGACATTTCGGTTTCGTTTTATTTGG
TTTGGTTTTCAGTTCAGTTGACCAAGCCTAGGCTTGGTCATGTTTCAAATACGTATGATA
GTGTTAATGATCTCTTTTGACTTTCATGATCCTTTTTAAGTGAGGTTTCAGGGATCTTAT
ATTTTGTTGTTATGAAGTGTAACCATCTATTGTAGAAGTAGCTATTGTTTGAGCCTTATC
ACATTCTTGTCTTGTAATATGCTACCGAGCAAACTTCAGGGTTCTTGAATTTAGAGGCCC
TTGGTTCTGAGTTTCCCTATTTTACAACACTTTCTTCACCATGGAGTCGTTAATTTTTTT
GGTTTGTGTTTGCAGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTGTGAAGTAA
TTGAGAATGATGCACCGATCCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTCCCTG
AAGATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTG
CTAGCTCCACCGATCCCCTGTTGAAGGAGTAACTTCCAGTTTTCTCATTGTTTGTGTTCT
TGTTGCTTTGTTTGGCCATGCTCTGAATAAATTGCGTACTAATTTTGAAAACTATAACAA
TACCATAAAATGTTCTATCATTATTCTCAAAAAAAACTATGATAATACAAATGATGCTTC
TTCCCCTTTGCAAGAACATTTACCATTCTTAAAGACATGTACTCGATTCCCATCTCTTAC
AGTTATATTCTTATCGACTAACCGGGTGATGAGAGAAACAAAGTCATGGCAGTCCTTACA
CAGGATCTTGTTCTTAACAACATGAACTGGAGTTTGTGCTGATGTGTACACAAGACCAAA
CACAGCAGCTTGCTTCGCGCTGTGATAGCTTGCATTTTCATTACCTCGGTACGTAAAGCC
TGACCTTTCGATCTCACTCTTTATCCATTCTATCTCTGCGTAAATCCCCTTCGTTTTCTC
AACTGTAGTAACATCCTCACTGAAAAATCTGTGAACTTTTCCTTGAACCTCCACAGAGCT
CTTCCCTAGCTTCTTACTCAAACCTTTCTGGCTCATCAAACTTCGAGTCTTTTGGGCCAA
CTCTTGTTTCCCAGATTCTTCGTATAAGTCTGCCAAAAGAATGTAGAAGGCTGGATCAGA
TGGTGCAAGTGCTAAGCCTTTGTTAGCCATATCTTCTCCTAAAGATAAATTCCCATGGTA
TCTACAAGCTCTCAACAATGTTTTGAAGATCAGAGCATTTGGTCTCAACGGCATCGTCTC
TAAAACTCCTGTTGCTTCCTCTAGTCGTCCCGCACGGCCTAAGATATCAACTAGATGAAC
ATTGTGCTCTATCTGTGGCTTAATGTTATGAGTCTCTTCCATTGATCGAAAATACTCGAG
ACCCATCTCGGTCAATCTTC
Pro Sequence
MYLRSIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYTKTLKEIQAVPED
EGYRKAVESFTRHRLNVCKEEEDWEAIEKRLGCGQVEELIEEAQDELTLI
GKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEDFYRTLEGLI
SESKTKIPAASSTDPLLKE
mRNA Sequence
ATGTACCTCCGGTCAATCGGACGGCCATTATTGGCTAAAGTGAAGCAGACGACGGGGATCGTCGGGCTTG
ACGTTGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACACGAAAACCCTGAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCTGTCGAATCGTTCACGCGCCACCGTCTCAATGTCTGCAAGGAA
GAGGAAGACTGGGAGGCAATCGAGAAGCGTCTTGGTTGCGGCCAAGTGGAAGAGCTCATCGAAGAGGCAC
AAGATGAGCTCACACTCATTGGGAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAATGATGCACCGATCCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTCCCTGAA
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCCACCG
ATCCCCTGTTGAAGGAGTAA