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Detail for ZS11_A01G46790.t1

Genome:
ZS11: ZS11_A01G46790.t1
ZS11_v0: BnaA01T0410700ZS
WE: WE_C01G55210.t1
WE_v0: BnaA01T0319700WE
Darmor: A05p44080.1_BnaDAR
BH: BnaA01T405100BH
Quinta: BnaC01T0410400QU
ZS2: BnaC01T466000ZS2
SW: BnaA01T396700SW
Express61: A05p034960.1_BnaEXP
Xiaoyun: BnaA01G0411200XY
P202: BnaC01G081880P202.1
BL: BnaA01T405100BH
TA: BnaA01T408300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g38710D
RB: BnaA01T450000RB
No2127: BnaC01T0379200NO
P130: BnaA01G037110P130.1
Length: 159
KOG ID: KOG3382
KOG E-value: 1.940000e-114
KOG Score: 322.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: GO:0016020(membrane)
Molecular Function: -
KEGG Ortholog: K11352 NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
NR Protein: XP_013729151.1
NR E-value: 8.000000e-93
NR Score: 344.7
NR Annotation: XP_013729151.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Brassica napus]
SwissProt Protein: Q9M9M9|NDUAC_ARATH
SwissProt E-value: 8.230000e-114
SwissProt Score: 322.0
SwissProt Annotation: Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1
CDS Sequence (486 bp)
ATGGCATTGACGGTGGCGAAGAGTGCGCTGGAGACGATTAGAGAGAAAGGTCTCGGCGGTTTCCTCAGGA
TGATCCGTGAAGAAGGATTCCTGAGATGCCTACCAGATGGGAACCTCTTGCAAACTAAAATACACAACAT
AGGAGCAACTCTTGTTGGTGTCGACAAGTTCGGTAACAAATACTACCAGAAGCTCGGTGATACTCAATAC
GGTAGACACAGATGGGTAGAATACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGCCGAGTGGC
ACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGCTGTTGAGTCAGAAACCAAAGAGGTATGG
GATTGAGCATAGAGAAAACTTCTCAGGAGAAGGTGATGCATACATTTACCATTCTAAAGGACATACCTTG
AACCCGGGCCAAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGACCAATTAA
Upstream Sequence
GTCCCTTGTTGTTTCGAGTGTCGAAGAGGAAAAGCGATGGCATTGACGGTGGCGAAGAGTGCGCTGGAGA
CGATTAGAGAGAAAGGTCTCGGCGGTTTCCTCAGGATGATCCGTGAAGAAGGATTCCTGAGATGCCTACC
AGATGGGAACCTCTTGCAAACTAAAATACACAACATAGGAGCAACTCTTGTTGGTGTCGACAAGTTCGGT
AACAAATACTACCAGAAGCTCGGTGATACTCAATACGGTAGACACAGATGGGTAGAATACGCATCCAAGG
ATCGTTACAACGCATCTCAAGTACCAGCCGAGTGGCACGGATGGCTTCATTTCATCACTGATCACACTGG
AGATGAGCTGTTGAGTCAGAAACCAAAGAGGTATGGGATTGAGCATAGAGAAAACTTCTCAGGAGAAGGT
GATGCATACATTTACCATTCTAAAGGACATACCTTGAACCCGGGCCAAAAGAACTGGACTCGGTACCAAC
CATGGGTACCCACCAAGACCAATTAAGAAAGTGAGAGCTCTGGTTTATGCTCTTTGAGAGTCTCTCTGAG
TGATTTGTTGTAATGTTTCTGTCTCTTTTGAATAAAAGCAACCTGTTTTTTTGGATCTAAAGCTGAAAAA
TTGGGTTTATGGTAATATGTATAATTGATGTTCTGTGGTTTCATCTCATATTTGCTTGCTTAAGCCTTCC
TTCACCTCTAGAGAAGAGTGTAGAGGACTATAAATAA
Downstream Sequence
GTAAGTTCTTCTTCCTCTTCTCAGCTTGTTTCAATTTGCGATCTCCTGGATTTGATTGAA
TCCCGTAAAACCTAGCAATTGGGTTCTTAAGACAATCTCTCATGTTCTAATTGGAATCGT
TTCAATTTTTTGTTTTCCTGATTACAGGAGATGCCTACCAGATGGGAACCTCTTGTAAGC
ATCTATCTCTTACTGTTTCCCATCTTTAGAGATTATTTTAAAAATATGATTCAAGAATCC
TATTTTTGAGCTGTTTACTACTACTTTTCAATTCGAAGTGCTGATTTTTTTTTGGCATAG
CTCTGTTTATTACATCATAGATGATCACGAGCTAGTGTAGTTTAGTGTAAGTTGAAGATG
TTTTTATTATAGGCTCTACGTAATTGCTTAAAGATCATTTCTTTATGCATGCTTTGAATA
TATGGAGCTTGATTTAACGTTTTTAGATTTTTAATACAGGGATGTTGTTGTGCATATGAA
TGTGTTAGATTTTGCAAAATATAACATCATTGAATTCAAGTATTTGCAGAGTAGTGTCAT
TGGTTCTGCCATTACTGATAACTATGATTATATATACTACTTTGCTTTTGCTAAACATAA
TGACATCCGTCTTTTGTTCGCTTGCTGATTCGGATTATTAGTGTATCACATAATATACTT
GAATATTGTGTTTTATTTTCCACCTTGTTTATATTTGACCTTGCTGTTGAGTCGTCATAG
TTTCTGATCTATATAAGTTTTGGTGTCTCTTGTTTGATCGTCCAAGGCAAACTAAAATAC
ACAACATAGGAGCAACTCTTGTTGGTGTCGACAAGTTCGGTAACAAATACTACCAGAAGC
TCGGTGATACTCAATACGGTACGCGCTTCTTCTTTTTAATAACTTGATGCGTTGCTACCT
GTTTAAAACCATGCTTTTGCTAAATACTGACGCAACTATAGGATTCATGATACCTGATAT
CTCTCTTCCAATAAAGTTTATATAGTTGACTTCAGATGTCTTGTCTACTTTTGAATTGTA
GCATTTGGTTTAACCATGGAACCTTTTTATCCAACTAGCTTCTGTTATTTGCTAGATCAC
ACCATAATCTGATGACTATCAGTAAAGTCGGAGTAAGAGAAGTTGAGCGTTTTAACCTAG
TTCAACAGAGATTTGTATAGCCTTGTTTAGGAAATGCCCAAGTTGTTATCGAAGCAAATT
CAAATCCAATCTCTGTGATAGTTTTGAGGAAATATGTGGTCAACTTTTCCCTTAAAAGAT
CTTTATATGTTGAAGATATAGTGGTGAAACTATTAATGTACCTATATAGAATTTTTAGCC
AAAATGCTTTTACATTGAAACATTGAGTCACTTGCAAACAGGTAGACACAGATGGGTAGA
ATACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGCCGAGTGGCACGGATGGCT
TCATTTCATCACTGATCACACTGGAGATGAGGTATGAATAAAGCCAATTCTAAATACCCT
TATCTCGGGTAGTAAATAAGTTGCTTACCAACTTGAAAACAAACAATGTCTCTCTTTCTT
TCTGTTTGAAGCTGTTGAGTCAGAAACCAAAGAGGTATGGGATTGAGCATAGAGAAAACT
TCTCAGGAGAAGGTGATGCATACATTTACCATTCTAAAGGACATACCTTGAACCCGGGCC
AAAAGAACTGGACTCGGTACCAACCATGGGTACCCACCAAGACCAATTAAGAAAGTGAGA
GCTCTGGTTTATGCTCTTTGAGAGTCTCTCTGAGTGATTTGTTGTAATGTTTCTGTCTCT
TTTGAATAAAAGCAACCTGTTTTTTTGGATCTAAAGCTGAAAAATTGGGTTTATGGTAAT
ATGTATAATTGATGTTCTGTGGTTTCATCTCATATTTGCTTGCTTAAGCCTTCCTTCACC
TCTAGAGAAGAGTGTAGAGGACTATAAATAAATATTTATCTTTTAAAACAGTTTTATCAA
TTCTAATTTTATGAAAAGAT
Pro Sequence
MALTVAKSALETIREKGLGGFLRMIREEGFLRCLPDGNLLQTKIHNIGAT
LVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFI
TDHTGDELLSQKPKRYGIEHRENFSGEGDAYIYHSKGHTLNPGQKNWTRY
QPWVPTKTN
mRNA Sequence
GTCCCTTGTTGTTTCGAGTGTCGAAGAGGAAAAGCGATGGCATTGACGGTGGCGAAGAGTGCGCTGGAGA
CGATTAGAGAGAAAGGTCTCGGCGGTTTCCTCAGGATGATCCGTGAAGAAGGATTCCTGAGATGCCTACC
AGATGGGAACCTCTTGCAAACTAAAATACACAACATAGGAGCAACTCTTGTTGGTGTCGACAAGTTCGGT
AACAAATACTACCAGAAGCTCGGTGATACTCAATACGGTAGACACAGATGGGTAGAATACGCATCCAAGG
ATCGTTACAACGCATCTCAAGTACCAGCCGAGTGGCACGGATGGCTTCATTTCATCACTGATCACACTGG
AGATGAGCTGTTGAGTCAGAAACCAAAGAGGTATGGGATTGAGCATAGAGAAAACTTCTCAGGAGAAGGT
GATGCATACATTTACCATTCTAAAGGACATACCTTGAACCCGGGCCAAAAGAACTGGACTCGGTACCAAC
CATGGGTACCCACCAAGACCAATTAAGAAAGTGAGAGCTCTGGTTTATGCTCTTTGAGAGTCTCTCTGAG
TGATTTGTTGTAATGTTTCTGTCTCTTTTGAATAAAAGCAACCTGTTTTTTTGGATCTAAAGCTGAAAAA
TTGGGTTTATGGTAATATGTATAATTGATGTTCTGTGGTTTCATCTCATATTTGCTTGCTTAAGCCTTCC
TTCACCTCTAGAGAAGAGTGTAGAGGACTATAAATAA