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Detail for ZS11_A01G46810.t1

Genome:
ZS11: ZS11_A01G46810.t1
ZS11_v0: BnaA01T0410900ZS
WE: WE_C01G55190.t1
WE_v0: BnaA01T0319900WE
Darmor: BNapus_Darmor_BZH_scaffold_129p00040.1_BnaDAR
BH: BnaA01T405200BH
Quinta: BnaA01T0321000QU
ZS2: BnaC01T465800ZS2
SW: BnaA01T396800SW
Express61: C05p046730.1_BnaEXP
Xiaoyun: BnaA01G0411400XY
P202: BnaC01G081890P202.1
BL: BnaA01T405200BH
TA: BnaC01T508000TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g38720D
RB: BnaA01T450100RB
No2127: BnaA01T0372700NO
P130: BnaA01G037100P130.2
Length: 111
KOG ID: KOG3456
KOG E-value: 1.870000e-68
KOG Score: 202.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03939 NDUFS6; NADH dehydrogenase (ubiquinone) Fe-S protein 6
NR Protein: XP_013631860.1
NR E-value: 2.800000e-60
NR Score: 236.1
NR Annotation: XP_013631860.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Brassica oleracea var. oleracea]
SwissProt Protein: Q9M9M6|NDUS6_ARATH
SwissProt E-value: 7.950000e-68
SwissProt Score: 202.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1
CDS Sequence (340 bp)
ATGGCGTCGAAGCTCGTGAAAGCCCTAATCCGATCGCAGATTCTTCCATCGACGAGGAGGCACTTCAGTG
CACCGGCTACCACCCAGCTCGGCGAGCCAACAGACGATCTAGTTGGAAACCACACCAAAAAATGGATGCA
GGATCTAAGCAAGAAGTCACCAATGGAACTGATCAATGAGGTCCCACCTATCAAAGTCAAAGGAAGGACT
GCTGCTTGTGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACCTACACG
AGCCTGCCGTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAA
Upstream Sequence
TTGCTGGTTCTCTCTTTTGCAAGGAGACTTCTTCCTCTGATCTTCTTTTTTTTTTGTAGAGAAGCAAAAA
AAAAAAATGGCGTCGAAGCTCGTGAAAGCCCTAATCCGATCGCAGATTCTTCCATCGACGAGGAGGCACT
TCAGTGCACCGGCTACCACCCAGCTCGGCGAGCCAACAGACGATCTAGTTGGAAACCACACCAAAAAATG
GATGCAGGATCTAAGCAAGAAGTCACCAATGGAACTGATCAATGAGGTCCCACCTATCAAAGTCAAAGGA
AGGACTGCTGCTTGTGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACC
TACACGAGCCTGCCGTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAAGAGCAACA
ACATTCTGAAATTCAACAAAAATCCCCAGTCTCTATTTCTTCTCCTTTTTTATTGCATTGTCAAGTTTGT
GTGATGCTCCGACATCTTCAGATATCATATCTAATAAAGGATTCGATCAATCTTTG
Downstream Sequence
GTACGTAGATCTTCCTTTCTCCTTATTAGTGTGAGTTGTTGTAGACGATGATATCCCCTA
TGAGGATTAGATCGCGATTTGCTCATCCTATATGGAACTGTGCATTAATTGAATTTTAGA
AATCAAATCATAGGCTAATTGTCCTTAAGTGAGTTGATTAAATGAAGATACAATTATCGA
TGTTGGATCATAATTTATATCATTCTTTGAATTTGTTCTGATGTTTTTTTTTTTGAATAT
TGAGAATATGTTCTTGAGCTATATAAAACATGTGAAGGCTAGGCAATTTAGATAGGTTTA
GTATGAAGTAGATAAATGTTATCATGCTTCTTTGTTCATCTTCATGGTCTATTTGCTATT
GTGATTTGATTCTGCATCTCCCTGAGTTAATAAGTTAAAAAAATGATTCAATGATTGCAT
GGCATAACCAATAGTCCAATCATCACATTCATTAGTTTAATAGCCTACTGGCTTGGATTG
GAATCACCTCCTTTTACTGATGAATTACATGAGCTTGAACATTTTGCCCATGTTAGTTTA
CACTTAGCTCTGTGATTGTTAGTTAACAGTTTAGTATTGGTTCTTTCTGATAAATTAGGA
AGTGTGTGTGCATATCTCTCTTTTTTTTTGCCACTTCACTAATAGTTTTGCATAACGGGG
CTGAAGAACTTAATCTGTAACAGGATCTAAGCAAGAAGTCACCAATGGAACTGATCAATG
AGGTCCCACCTATCAAAGTCAAAGGAAGGACTGCTGCTTGTGAAGGAGGTTTGTTTCCTC
TTCTCATCAGTCATTAAAGATATTTTGATTTTGTGATTATTACCAAACTGGAGGTTGATT
TAATTATTGACTTTGATATAACATTGCAGACACCAATCCAGCACTCGGTCATCCAATTGA
GTTCATTTGCCTCGACCTACACGAGCCTGCCGTCTGCAAGTACTGTGGCCTTCGTTATGT
TCAAGATCATCATCACTAAGAGCAACAACATTCTGAAATTCAACAAAAATCCCCAGTCTC
TATTTCTTCTCCTTTTTTATTGCATTGTCAAGTTTGTGTGATGCTCCGACATCTTCAGAT
ATCATATCTAATAAAGGATTCGATCAATCTTTGATTATGTTTGACCTCACTGTCTTTCCA
TGTCACTGAGCCTGAGAATTTGCTATATAACCAGTGTCTAGCTCGATTTTTTATTAGTAC
AATAGTGTAACACAAGGGTACAAGACCTCTCTCCTTGACCAAAAAGGAGTAACAATAGTG
TTGAAAATCTCTTTTTGTTTTGCTTCTTTCAAAAAGTGTGAAGGTGAGACCAACTTGACT
AACGTACACATCAAAATCTCATTTAGAATCGGTTCCAGCCAATTTTCTTCTCTGCTGATG
CTCTGCAACTTTGTAATCCACAACCTCTCTGAACAGCGCAGAGTCCAACACACAGTCTTC
ACTTCCATAAACAGCTGCCTGAACACTCGCCATCAGCTTCGCAATCTCTCTCCCTGAGAA
CCCTTCGGTTTTCGCAGCCGCTTCCTTCAAGAGCTCCTCAGTGACGCCCTTTATCTCAAT
CTTCTGCTGCTCTTTCTTGAAGAGGCGGTCGAACAAACCTGGCTTTCTTGGACCAGCTTG
AGCTATGTACTTTTCTAGATACAGGCTTAGAAGCTTGAACCGCTCTTCTTCTCCTGGTAA
TGGGAATTCGAGAACCTCGTCCACACGGTCAGCCACGGCTGAGTCTAAGTCACCAGGTCG
GTTCGTGGCGAGTGCTAAGACAATGTCCTTGGACTGATCACCCGTGCGGAAGAGAAGAGC
GTTTAATGCACTCCTTTGAGCTTCACTCATGTATGTTTTGTTCCTCCTGTTAAATTGCCA
TAAACACACATCAAAACAATGAACAGAGAATGTAATATAATCTGAGCAACAACACTTACT
CGCACAAAAATGCATCAGCTTCATCAATAAAGAGCAATAAGCCTCTCTTAGACTTCTTCC
CCCAATCAAACAGCTGGTGA
Pro Sequence
MASKLVKALIRSQILPSTRRHFSAPATTQLGEPTDDLVGNHTKKWMQDLS
KKSPMELINEVPPIKVKGRTAACEGDTNPALGHPIEFICLDLHEPAVCKY
CGLRYVQDHHH
mRNA Sequence
TTGCTGGTTCTCTCTTTTGCAAGGAGACTTCTTCCTCTGATCTTCTTTTTTTTTTGTAGAGAAGCAAAAA
AAAAAAATGGCGTCGAAGCTCGTGAAAGCCCTAATCCGATCGCAGATTCTTCCATCGACGAGGAGGCACT
TCAGTGCACCGGCTACCACCCAGCTCGGCGAGCCAACAGACGATCTAGTTGGAAACCACACCAAAAAATG
GATGCAGGATCTAAGCAAGAAGTCACCAATGGAACTGATCAATGAGGTCCCACCTATCAAAGTCAAAGGA
AGGACTGCTGCTTGTGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACC
TACACGAGCCTGCCGTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAAGAGCAACA
ACATTCTGAAATTCAACAAAAATCCCCAGTCTCTATTTCTTCTCCTTTTTTATTGCATTGTCAAGTTTGT
GTGATGCTCCGACATCTTCAGATATCATATCTAATAAAGGATTCGATCAATCTTTG