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Detail for ZS11_A10G29090.t1

Genome:
ZS11: ZS11_A10G29090.t1
ZS11_v0: BnaC09T0561500ZS
WE: WE_A10G29670.t1
WE_v0: BnaA10T0243500WE
Darmor: C09p67860.1_BnaDAR
BH: BnaA10T267700BH
Quinta: BnaC09T0524400QU
ZS2: BnaA10T252700ZS2
SW: BnaA10T270000SW
Express61: A10p023800.1_BnaEXP
Xiaoyun: BnaA10G0253200XY
P202: BnaA10G020570P202.1
BL: BnaA10T267700BH
TA: BnaA10T251900TA
Da-Ae: Not available
RB: BnaA10T263900RB
No2127: BnaA10T0190900NO
P130: BnaA10G026240P130.1
Length: 213
KOG ID: KOG0449
KOG E-value: 7.650000e-58
KOG Score: 179.0
KOG Annotation: Carbohydrate transport and metabolism
Biological Process: GO:0006099(tricarboxylic acid cycle)
Cellular Component: GO:0016020(membrane),GO:0045281(succinate dehydrogenase complex)
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0000104(succinate dehydrogenase activity),GO:0009055(electron transfer activity)
KEGG Ortholog: K00236 SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
NR Protein: XP_013715750.1
NR E-value: 6.100000e-112
NR Score: 408.7
NR Annotation: XP_013715750.1 succinate dehydrogenase subunit 3-1, mitochondrial-like isoform X1 [Brassica napus]
SwissProt Protein: P0DKI1|SDH32_ARATH
SwissProt E-value: 2.770000e-108
SwissProt Score: 312.0
SwissProt Annotation: Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1
CDS Sequence (651 bp)
ATGGCTGCCACGGCTCTTCTCCGATCGATCCGCCGACGCGACGTCGTCTCCGCGCCTCTTTCCGTCTACA
AATCTCTTGCTGGTAATGCTCAACCTTCATTGGGTTCGTACACTGGTCAGAACTATGCAAGTTTGTGTAG
AGCTTTCGGATCGAGAGCTGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTACCAACGCAAGCAAC
GCCGTTAGAGAGGAGAGAGAGCATTCAAAAGCTTCTGTGAATGCTATGGGAGCTCATTTGAGAGCTCTTG
GTGTGGGAACACCGAGACGCGTGTTGTCTACAATCGCCGAGGGTATAAAGATGACAGAGGAGGAACAGAC
TTCTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCAGAAGAACTCA
ATGTTATCCATTTTCAACAGAATCTCGGGGATTTACCTGACCGGAGTCTTTTATGGCGGCTATCTTCTCT
ACCTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATGTCCAGCAGCA
ACTTCCGGTTATCACCTCGGTTACTGCATTAGCCGCGCTTTACCATACTATCAAGAGTATTCACTCCCTC
TTGACCCATTGA
Upstream Sequence
CATTTCCCTTGTTCGAGTTTTCTCAGGAAAGTTAGTAGAGAGAGAGATACTGGTTTTGATTCAACACGAT
GGCTGCCACGGCTCTTCTCCGATCGATCCGCCGACGCGACGTCGTCTCCGCGCCTCTTTCCGTCTACAAA
TCTCTTGCTGGTAATGCTCAACCTTCATTGGGTTCGTACACTGGTCAGAACTATGCAAGTTTGTGTAGAG
CTTTCGGATCGAGAGCTGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTACCAACGCAAGCAACGC
CGTTAGAGAGGAGAGAGAGCATTCAAAAGCTTCTGTGAATGCTATGGGAGCTCATTTGAGAGCTCTTGGT
GTGGGAACACCGAGACGCGTGTTGTCTACAATCGCCGAGGGTATAAAGATGACAGAGGAGGAACAGACTT
CTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCAGAAGAACTCAAT
GTTATCCATTTTCAACAGAATCTCGGGGATTTACCTGACCGGAGTCTTTTATGGCGGCTATCTTCTCTAC
CTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATGTCCAGCAGCAAC
TTCCGGTTATCACCTCGGTTACTGCATTAGCCGCGCTTTACCATACTATCAAGAGTATTCACTCCCTCTT
GACCCATTGAAGCAACCTTTCCCCTAAGCTCTTTTCGTTGTTTTGTTAAGCCGCCAAAGTCTCCAGAAAG
AGTTTCCTTGAGATGCACAAGATTTAATAAAAAGAGAGTAGAAATGTTTGTTAAACTCTCATCGTCTTTT
GAGAAAGCAAGTGTCTAGCTTTTGTTTTTGGGATTTTAGGCTTTGAAAACTTATGTTTGTTTGCTTTTTC
TTTGTTCTAAGACATAATTGAAGTGGTTGGAATGTAATAAAATGTTTACCTGTTTACTTGAGGGAGATGC
AGGTTGGGCATGGGAATAATACTTTTGAGAGTGATTGAAGACGAAATTGAAAATTAGATTCTTG
Downstream Sequence
TGTACGTTGATTGCTTCTTTTCCGTGAAATAGTTGATAGATCGAGAAAATATTTCGATTC
GTTTCGTTTCGTCTTTGTTTTCAACGACGAACGTCTCTGTTATGTTTCGTTTCGCTGGAA
TTATTCATGGGATATGAAACAGATATGCTGATTTGCAGATTTTGATGTATTGATGATTGT
TGATTTAGAAATAAAAATTTGAAAACACGAGATTATCTAGCAGCAGGGTACATGTTTGTA
TAGCCTCTTGTGGAATAGAAATGAACTTTTCTCGGAATAGTCTGAAGACTGTTAGCAAAG
AATAAGATGATAGAGAGTTAGCTACCGTATGAGTTTTAATTTTTTTTTTGAGGCGCTTAA
TGAGAATCAGATGATAAGGTCTTCTTTTTCATGTTGGATATGGGTAGAGAGTTTTTTTTC
TTAACTGTTCTTGATGAACGTTCTTCTCTGCAGCTTGCTGGTAATGCTCAACCTTCATTG
GGTTCGTACACTGGTCAGAACTATGCAAGTTTGTGTAGAGCTTTCGGGTATGTTTCCTTT
TGCAAAACAAAAAAAAACGTATGGAGTCACCCTGTTGTTGCGCTTTTGACCGTGTGTCTT
TTTCTTTATAGATCGAGAGCTGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTACC
AACGCAAGCAACGCCGTTAGAGAGGAGAGAGAGGTAAGATGTCTTTGTCCAAATTTTTGG
TGTTTCCTTTGAGCAGCTTAAACTTATGGTTGTTCCTTATCTCGATTCTTCCAGCATTCA
AAAGCTTCTGTGAATGCTATGGGAGCTCATTTGAGAGCTCTTGGTGTGGGAACACCGAGA
CGCGTGTTGTCTACAATCGCCGAGGGTATAAAGATGACAGAGGAGGAACAGACTTCTCCA
AAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCAGAAGAAC
TCAATGTTATCCATTTTCAACAGAATCTCGGGGATTTACCTGACCGGAGTCTTTTATGGC
GGCTATCTTCTCTACCTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAA
GTTCATTACCATGTCCAGCAGCAACTTCCGGTTATCACCTCGGTTACTGCATTAGCCGCG
CTTTACCATACTATCAAGAGTATTCACTCCCTCTTGACCCATTGAAGCAACCTTTCCCCT
AAGCTCTTTTCGTTGTTTTGTTAAGCCGCCAAAGTCTCCAGAAAGAGTTTCCTTGAGATG
CACAAGATTTAATAAAAAGAGAGTAGAAATGTTTGTTAAACTCTCATCGTCTTTTGAGAA
AGCAAGTGTCTAGCTTTTGTTTTTGGGATTTTAGGCTTTGAAAACTTATGTTTGTTTGCT
TTTTCTTTGTTCTAAGACATAATTGAAGTGGTTGGAATGTAATAAAATGTTTACCTGTTT
ACTTGAGGGAGATGCAGGTTGGGCATGGGAATAATACTTTTGAGAGTGATTGAAGACGAA
ATTGAAAATTAGATTCTTGAGTGGTTTTCTTGTTTCTTAGGTTGGTTCTCTCATGTTTTG
ATCGTTGCCTAGTTGATAAAATAACACAGAAGCATGGGCCAGGACATTTTGAGTTTTGGG
CTAAATGTGGAAGGAAAAAAGTAATACGTAGCTGTGAAAAGCCTAATCACGCGCTATCGG
CCCTATAAAGTTTTTATTTATGCGAAAAGCCCAATAGTCTACGGATTTTTGGCTGGCGCG
TTCAACGCGATTCTAATGCTCGTGGGTTTCTTCTTTAGTAGTTTACATTTTATGTTTGTT
AATTGCCCTGTTAATCTCTGATCGATTTTTTTGTGATTGGGAATTGATCAAAATGGGAAC
ACAAATATCTACCTCCACAAAAGATAAAGACATCATTATCTTAGAAGACATAACACATTT
TTATTACACAAAGGAGCAACTGTCTTCAAAAACTAACTAATTACGGTTGTGCTGGGAATG
GATCTAGTCTTAACAAATCA
Pro Sequence
MAATALLRSIRRRDVVSAPLSVYKSLAGNAQPSLGSYTGQNYASLCRAFG
SRAGVNENVGTGFGTTNASNAVREEREHSKASVNAMGAHLRALGVGTPRR
VLSTIAEGIKMTEEEQTSPKPQSFRPLSPHLTVYQPQKNSMLSIFNRISG
IYLTGVFYGGYLLYLKMGMICLTYPAFYQVHYHVQQQLPVITSVTALAAL
YHTIKSIHSLLTH
mRNA Sequence
CATTTCCCTTGTTCGAGTTTTCTCAGGAAAGTTAGTAGAGAGAGAGATACTGGTTTTGATTCAACACGAT
GGCTGCCACGGCTCTTCTCCGATCGATCCGCCGACGCGACGTCGTCTCCGCGCCTCTTTCCGTCTACAAA
TCTCTTGCTGGTAATGCTCAACCTTCATTGGGTTCGTACACTGGTCAGAACTATGCAAGTTTGTGTAGAG
CTTTCGGATCGAGAGCTGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTACCAACGCAAGCAACGC
CGTTAGAGAGGAGAGAGAGCATTCAAAAGCTTCTGTGAATGCTATGGGAGCTCATTTGAGAGCTCTTGGT
GTGGGAACACCGAGACGCGTGTTGTCTACAATCGCCGAGGGTATAAAGATGACAGAGGAGGAACAGACTT
CTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCAGAAGAACTCAAT
GTTATCCATTTTCAACAGAATCTCGGGGATTTACCTGACCGGAGTCTTTTATGGCGGCTATCTTCTCTAC
CTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATGTCCAGCAGCAAC
TTCCGGTTATCACCTCGGTTACTGCATTAGCCGCGCTTTACCATACTATCAAGAGTATTCACTCCCTCTT
GACCCATTGAAGCAACCTTTCCCCTAAGCTCTTTTCGTTGTTTTGTTAAGCCGCCAAAGTCTCCAGAAAG
AGTTTCCTTGAGATGCACAAGATTTAATAAAAAGAGAGTAGAAATGTTTGTTAAACTCTCATCGTCTTTT
GAGAAAGCAAGTGTCTAGCTTTTGTTTTTGGGATTTTAGGCTTTGAAAACTTATGTTTGTTTGCTTTTTC
TTTGTTCTAAGACATAATTGAAGTGGTTGGAATGTAATAAAATGTTTACCTGTTTACTTGAGGGAGATGC
AGGTTGGGCATGGGAATAATACTTTTGAGAGTGATTGAAGACGAAATTGAAAATTAGATTCTTG