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DETAIL

Detail for ZS11_A10G29620.t1

Genome:
ZS11: ZS11_A10G29620.t1
ZS11_v0: BnaA10T0252700ZS
WE: WE_A10G30160.t1
WE_v0: BnaA10T0247900WE
Darmor: A10p28200.1_BnaDAR
BH: BnaA10T271500BH
Quinta: BnaA10T0244800QU
ZS2: BnaA10T256900ZS2
SW: BnaA10T281700SW
Express61: A10p024230.1_BnaEXP
Xiaoyun: BnaA10G0257600XY
P202: BnaC09G110630P202.2
BL: BnaA10T271500BH
TA: BnaA10T256300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g35470D
RB: BnaA10T268000RB
No2127: BnaC09T0502000NO
P130: BnaA10G026660P130.1
Length: 794
KOG ID: KOG2658
KOG E-value: Not available
KOG Score: 952.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0003677(DNA binding),GO:0051539(4 iron, 4 sulfur cluster binding),GO:0010181(FMN binding),GO:0051287(NAD binding)
KEGG Ortholog: K03942 NDUFV1; NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2]
NR Protein: XP_009122464.1
NR E-value: 3.000000e-265
NR Score: 919.8
NR Annotation: XP_009122464.1 PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Brassica rapa]
SwissProt Protein: Q9FNN5|NDUV1_ARATH
SwissProt E-value: Not available
SwissProt Score: 952.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08530 PE=1 SV=1
CDS Sequence (2419 bp)
ATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCGGTATCAGTTTGGAAGGAGAGTAACAGATTGG
CTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTCCACCTCC
TCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCTCTACGGT
CTGCACGACCCGTTTCTCAAGGGGGCGATGAAGAGAGGCGATTGGCATAGGACCAAGGATTTGGTGCTCA
AGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGTGGTGCTGGTTTCCC
TTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGTTAATGCT
GATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCACGACCCTCACAAGCTGTTGGAAG
GGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGTATGTGAA
TGAACGTTTGAATCTAGAGAAGGCCAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAATGCTTGT
GGTTCTGGGTATGACTTTGATGTTTACATCCACTTTGGAGCTGGTGCGTACATTTGTGGTGAAGAGACTG
CGCTTCTTGAAAGCCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTAATGCTGG
TTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTTAAGGCGT
GGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATATCGGGAC
ATGTGAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGAGGCATTG
TGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTTCCTTTGATT
CCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAATCAGGGCTAGGAA
CTGCAGCGGTCATTGTGATGGATAAATCGACCGACGTTGTGGATGCAATTGCGAGGCTCTCTTACTTCTA
CAAGCATGAAAGCTGTGGGCAGTGCACTCCTTGCAGAGAGGGAACAGGGTGGCTCTGGATGATCATGGAG
AGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACTAAGCAGATCGAAG
GACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCCGTCCAAGGCTGCTGCTTAAAACCCTTGTT
AACGACAGGGTATTTGCTATTATTATCGATGGAAATAAAATCTGAAGCACACTTAGGGTTTTGGGGATGC
AAAGCTACTTCAGAAGGAGAAGAAGATTTAGAAAAATTGACTGTGGAAGAAGTTAGTGATGGTTCTGCGT
GGAGTAGGGAAGATGATATTGCCTTCGAGAGAGCTCTTGCTAATCATACAGATGAATCCGAGGAAAAATG
GGAGAAGATTGCTGCTGATGTTCCAGGGAAAAGTGTTGACCAGATTAAAGAGCATTACGAGCTTTTAGTT
GAGGATGTTGATAGGATTGAGTCAGGATGTGTCCCTCTTCCTTCTTACCGTTCTCCTCTTGACGATGCTG
GTGACGATGGTGGAAGCAGTAAGAGAGGAGGTAACAGTCATGACCAGGGAAGCAAAGCGAAGGCTGATCA
AGAACGACGAAAGGGTATTGCCTGGTCTGAGGATGAGCACAGGTTATTTCTTCTTGGTTTGGATAAGTAC
GGGAAAGGTGACTGGCGTAGCATTTCTCGTAACTTTGTGGTAACAAGAACACCGACCCAAGTAGCAAGCC
ATGCTCAAAAGTATTTCATTCGTCTAAACTCAATGAACAAAGATAGAAGACGATCAAGCATTCACGACAT
TACTAGTGTTGGCGACGTAGATGTCTCAACGCCACAAGGACCGATCACTGGTCAGAACAACAACAACAAC
AACGCCGGTTCTGCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAACCCGCCTCCCAACCAACAC
CTGGACCTCCTATGTATGGAACACCCACCATAGGTCAACCAGTAACTGGACCATTGGTCTCAGCAGTTGG
AACACCTGTGAACCTCCCAGCTCCGCCTCACATGGCTTATGGAGTCCATTCTGCTCCAGTCCCTGGATCA
GTGGTTCCTGGTGCACCTATGAACATGGCTCAGATGCCGTACACCATGCCGAGGACACCAACTGCTCATA
GGTAA
Upstream Sequence
ATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCGGTATCAGTTTGGAAGGAGAGTAACAGATTGG
CTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTCCACCTCC
TCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCTCTACGGT
CTGCACGACCCGTTTCTCAAGGGGGCGATGAAGAGAGGCGATTGGCATAGGACCAAGGATTTGGTGCTCA
AGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGTGGTGCTGGTTTCCC
TTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGTTAATGCT
GATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCACGACCCTCACAAGCTGTTGGAAG
GGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGTATGTGAA
TGAACGTTTGAATCTAGAGAAGGCCAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAATGCTTGT
GGTTCTGGGTATGACTTTGATGTTTACATCCACTTTGGAGCTGGTGCGTACATTTGTGGTGAAGAGACTG
CGCTTCTTGAAAGCCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTAATGCTGG
TTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTTAAGGCGT
GGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATATCGGGAC
ATGTGAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGAGGCATTG
TGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTTCCTTTGATT
CCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAATCAGGGCTAGGAA
CTGCAGCGGTCATTGTGATGGATAAATCGACCGACGTTGTGGATGCAATTGCGAGGCTCTCTTACTTCTA
CAAGCATGAAAGCTGTGGGCAGTGCACTCCTTGCAGAGAGGGAACAGGGTGGCTCTGGATGATCATGGAG
AGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACTAAGCAGATCGAAG
GACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCCGTCCAAGGCTGCTGCTTAAAACCCTTGTT
AACGACAGGGTATTTGCTATTATTATCGATGGAAATAAAATCTGAAGCACACTTAGGGTTTTGGGGATGC
AAAGCTACTTCAGAAGGAGAAGAAGATTTAGAAAAATTGACTGTGGAAGAAGTTAGTGATGGTTCTGCGT
GGAGTAGGGAAGATGATATTGCCTTCGAGAGAGCTCTTGCTAATCATACAGATGAATCCGAGGAAAAATG
GGAGAAGATTGCTGCTGATGTTCCAGGGAAAAGTGTTGACCAGATTAAAGAGCATTACGAGCTTTTAGTT
GAGGATGTTGATAGGATTGAGTCAGGATGTGTCCCTCTTCCTTCTTACCGTTCTCCTCTTGACGATGCTG
GTGACGATGGTGGAAGCAGTAAGAGAGGAGGTAACAGTCATGACCAGGGAAGCAAAGCGAAGGCTGATCA
AGAACGACGAAAGGGTATTGCCTGGTCTGAGGATGAGCACAGGTTATTTCTTCTTGGTTTGGATAAGTAC
GGGAAAGGTGACTGGCGTAGCATTTCTCGTAACTTTGTGGTAACAAGAACACCGACCCAAGTAGCAAGCC
ATGCTCAAAAGTATTTCATTCGTCTAAACTCAATGAACAAAGATAGAAGACGATCAAGCATTCACGACAT
TACTAGTGTTGGCGACGTAGATGTCTCAACGCCACAAGGACCGATCACTGGTCAGAACAACAACAACAAC
AACGCCGGTTCTGCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAACCCGCCTCCCAACCAACAC
CTGGACCTCCTATGTATGGAACACCCACCATAGGTCAACCAGTAACTGGACCATTGGTCTCAGCAGTTGG
AACACCTGTGAACCTCCCAGCTCCGCCTCACATGGCTTATGGAGTCCATTCTGCTCCAGTCCCTGGATCA
GTGGTTCCTGGTGCACCTATGAACATGGCTCAGATGCCGTACACCATGCCGAGGACACCAACTGCTCATA
GGTAA
Downstream Sequence
GTAAGCAATCAGTTTCTATCATCTTCCTTTTCATTTTCTAGGTTTTGCATCTTTTTATCT
CGATCGCAAATCATAGAGCTTTTGGAATCTAAGACTTGTTTTGTGTTGCATTTATTTCGA
ATTTCAGCTTAATGGTTTCAAAATGCGACCTTTACTTTCATATAGATCTAGCGAGTTGTG
ATTGTTTGGGATTTGATTTTGATCTGCTCGTTGTTCTTCGAGATTGGGTTGATTCACTTC
CTTTTGGTTTGGTTTGATATTGAAATATAGATTCTTTTTTCAATGTTCACATTTTATATG
TAACCTCTATGTGTTATATGCGTTTGATGACAGGCACCTGTGAGGGGGATTCTTGGTTTG
CAGAGGGCGGTATCAGTTTGGAAGGAGAGTAACAGATTGGCTCCAGCTTTGAGATCATTC
AGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTCCACCTCCTCCGCCTCCG
GAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCTCTACGGT
CTGCACGACCCGTTTCTCAAGGGGGCGATGAAGAGAGGCGATTGGCATAGGACCAAGGAT
TTGGTGCTCAAGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGA
CGTGGTGGTGCTGGTTTCCCTTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGAT
GGGCGTCCTTCTTATTTGGTTGTTAATGCTGATGAGAGTGAGCCTGGGACTTGTAAAGAT
AGGGAGATCATGCGTCACGACCCTCACAAGCTGTTGGAAGGGTGTTTGATTGCTGGTGTT
GGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGTATGTGAATGAACGTTTG
AATCTAGAGAAGGCCAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAATGCTTGT
GGTTCTGGGTATGACTTTGATGTTTACATCCACTTTGGAGCTGGTGCGTACATTTGTGGT
GAAGAGACTGCGCTTCTTGAAAGCCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCT
CCGTTCCCTGCTAATGCTGGTTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACG
GTGGCTGTTTCTCCTACCATTTTAAGGCGTGGACCTGAGTGGTTTTCGAGTTTTGGTAGG
AAGAATAACTCTGGGACGAAGCTGTTTTGTATATCGGGACATGTGAACAAGCCATGTACC
GTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGAGGCATTGTGGAGGTGTC
AGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTTCCTTTGATT
CCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAATCA
GGGCTAGGAACTGCAGCGGTCATTGTGATGGATAAATCGACCGACGTTGTGGATGCAATT
GCGAGGCTCTCTTACTTCTACAAGCATGAAAGCTGTGGGCAGTGCACTCCTTGCAGAGAG
GGAACAGGGTGGCTCTGGATGATCATGGAGAGGATGAAAGTTGGCAATGCAAAGCTGGAG
GAGATTGATATGCTTCACGAGGTAACTAAGCAGATCGAAGGACACACAATCTGTGCATTG
GGTGATGCAGCTGCATGGCCCGTCCAAGGTCTGATAAGGCACTTTAGGCCGGAGCTTGAG
AGAAGGATCAGGGAACGCGCTGAAAGGGAGTTGCTACAGGCTGCTGCTTAAAACCCTTGT
TAACGACAGGTTAGCATCTCCCATCCTTGAACTCTTTTAATTTCCTGTTGCAAACTTAAA
ATGCAAAGATCTAGTTGATTGTTTGATGAAAAGGTAGAGTTGGAGGCTCTATAGTTTCTT
TGGTCCTTCATAATCTATGCCTTTTTTTTGCAGGGTATTTGCTATTATTATCGATGGAAA
TAAAATCTGAAGCACACTTA
Pro Sequence
MAPVRGILGLQRAVSVWKESNRLAPALRSFSTQAASTSTTPQPPPPPPPP
EKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIV
NEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD
REIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARREAY
AAGLLGKNACGSGYDFDVYIHFGAGAYICGEETALLESLEGKQGKPRLKP
PFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNSGTKLFC
ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLI
PKNICEDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHE
SCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLHEVTKQIEGHTICAL
GDAAAWPVQGCCLKPLLTTGYLLLLSMEIKSEAHLGFWGCKATSEGEEDL
EKLTVEEVSDGSAWSREDDIAFERALANHTDESEEKWEKIAADVPGKSVD
QIKEHYELLVEDVDRIESGCVPLPSYRSPLDDAGDDGGSSKRGGNSHDQG
SKAKADQERRKGIAWSEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQ
VASHAQKYFIRLNSMNKDRRRSSIHDITSVGDVDVSTPQGPITGQNNNNN
NAGSAAVAGGGNKSAKQPASQPTPGPPMYGTPTIGQPVTGPLVSAVGTPV
NLPAPPHMAYGVHSAPVPGSVVPGAPMNMAQMPYTMPRTPTAHR
mRNA Sequence
ATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCGGTATCAGTTTGGAAGGAGAGTAACAGATTGG
CTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTCCACCTCC
TCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCTCTACGGT
CTGCACGACCCGTTTCTCAAGGGGGCGATGAAGAGAGGCGATTGGCATAGGACCAAGGATTTGGTGCTCA
AGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGTGGTGCTGGTTTCCC
TTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGTTAATGCT
GATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCACGACCCTCACAAGCTGTTGGAAG
GGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGTATGTGAA
TGAACGTTTGAATCTAGAGAAGGCCAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAATGCTTGT
GGTTCTGGGTATGACTTTGATGTTTACATCCACTTTGGAGCTGGTGCGTACATTTGTGGTGAAGAGACTG
CGCTTCTTGAAAGCCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTAATGCTGG
TTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTTAAGGCGT
GGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATATCGGGAC
ATGTGAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGAGGCATTG
TGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTTCCTTTGATT
CCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAATCAGGGCTAGGAA
CTGCAGCGGTCATTGTGATGGATAAATCGACCGACGTTGTGGATGCAATTGCGAGGCTCTCTTACTTCTA
CAAGCATGAAAGCTGTGGGCAGTGCACTCCTTGCAGAGAGGGAACAGGGTGGCTCTGGATGATCATGGAG
AGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACTAAGCAGATCGAAG
GACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCCGTCCAAGGCTGCTGCTTAAAACCCTTGTT
AACGACAGGGTATTTGCTATTATTATCGATGGAAATAAAATCTGAAGCACACTTAGGGTTTTGGGGATGC
AAAGCTACTTCAGAAGGAGAAGAAGATTTAGAAAAATTGACTGTGGAAGAAGTTAGTGATGGTTCTGCGT
GGAGTAGGGAAGATGATATTGCCTTCGAGAGAGCTCTTGCTAATCATACAGATGAATCCGAGGAAAAATG
GGAGAAGATTGCTGCTGATGTTCCAGGGAAAAGTGTTGACCAGATTAAAGAGCATTACGAGCTTTTAGTT
GAGGATGTTGATAGGATTGAGTCAGGATGTGTCCCTCTTCCTTCTTACCGTTCTCCTCTTGACGATGCTG
GTGACGATGGTGGAAGCAGTAAGAGAGGAGGTAACAGTCATGACCAGGGAAGCAAAGCGAAGGCTGATCA
AGAACGACGAAAGGGTATTGCCTGGTCTGAGGATGAGCACAGGTTATTTCTTCTTGGTTTGGATAAGTAC
GGGAAAGGTGACTGGCGTAGCATTTCTCGTAACTTTGTGGTAACAAGAACACCGACCCAAGTAGCAAGCC
ATGCTCAAAAGTATTTCATTCGTCTAAACTCAATGAACAAAGATAGAAGACGATCAAGCATTCACGACAT
TACTAGTGTTGGCGACGTAGATGTCTCAACGCCACAAGGACCGATCACTGGTCAGAACAACAACAACAAC
AACGCCGGTTCTGCTGCTGTTGCTGGAGGAGGAAACAAATCAGCCAAGCAACCCGCCTCCCAACCAACAC
CTGGACCTCCTATGTATGGAACACCCACCATAGGTCAACCAGTAACTGGACCATTGGTCTCAGCAGTTGG
AACACCTGTGAACCTCCCAGCTCCGCCTCACATGGCTTATGGAGTCCATTCTGCTCCAGTCCCTGGATCA
GTGGTTCCTGGTGCACCTATGAACATGGCTCAGATGCCGTACACCATGCCGAGGACACCAACTGCTCATA
GGTAA