SEARCH

DETAIL

Detail for ZS11_A10G30400.t1

Genome:
ZS11: ZS11_A10G30400.t1
ZS11_v0: BnaA10T0259500ZS
WE: WE_A10G30900.t1
WE_v0: BnaA10T0254400WE
Darmor: A10p28910.1_BnaDAR
BH: BnaA10T279100BH
Quinta: BnaA10T0251300QU
ZS2: BnaA10T263700ZS2
SW: BnaA10T306900SW
Express61: A10p024940.1_BnaEXP
Xiaoyun: BnaA10G0264800XY
P202: BnaA10G021360P202.1
BL: BnaA10T279100BH
TA: BnaA10T263200TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA10T275300RB
No2127: BnaA10T0202000NO
P130: BnaA10G027260P130.2
Length: 556
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1038.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0052716(hydroquinone:oxygen oxidoreductase activity),GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013715404.1
NR E-value: Not available
NR Score: 1150.6
NR Annotation: XP_013715404.1 laccase-13-like [Brassica napus]
SwissProt Protein: Q9LYQ2|LAC13_ARATH
SwissProt E-value: Not available
SwissProt Score: 1038.0
SwissProt Annotation: Laccase-13 OS=Arabidopsis thaliana OX=3702 GN=LAC13 PE=2 SV=1
CDS Sequence (1694 bp)
ATGGAGCAAGTCTGGTTATTCTCTGTGTTGTTGGTTTTTGTAGCTTCACTTGTTAATGCTGAAGTTCACT
TCCATGAGTTCATTATCCAAGAGACGCCGGTGAAGAGGCTGTGCAGAGTTCATAACTCCATCACGGTGAA
TGGAGAGTTTCCAGGTCCAACCTTGGAGGTTAGAAACGGTGATTCTCTTGTCATAACAGCCATTAACAAA
GCTCAGTACAACATCAGCCTCCACTGGCATGGGATAAAGCAGATGAGGAATCCATGGGCGGATGGACCAG
AATACATAACACAATGCCCAATCAAACCAGGAGGGAGTTACACCTACAGATTCAACATCGAAGAACAAGA
AGGTACCTTGTGGTGGCACGCCCACAGCAGATGGCTGAGAGCCACCGTGTACGGAGCTCTCATCATCCGC
CCTCCGCTCTCTTCTCCTCATTACCCTTTCCCAGTTCTCCCCAAGAGAGAAAACCCCATGGATGTACTGA
ACATGGCTCAGTTCACTGGAGCTGCACCAAACGTCTCAGACGCCTTCACCATCAACGGTCAGCCTGGTGA
TTTCTACAGATGCTCCAGCCAAGAAACTTTGAGGTTTCTGGTGGGATCAGGAGAGACCGTCCTCCTCAGG
GTCATCAACTCTGGCTTAAACCAAGAGCTCTTCTTCGGTGTGGCGAATCACAAACTCACAGTGGTTGCTG
CGGATGCCTCCTACACCAAACCTTTCTCCACCAATGTCATAATGTTAGGTCCAGGTCAGACAACTGATGT
GCTTCTAACCGCAGACCAACCGCCAGCACACTACTACATGGCGGCACACGCTTACAACAGCGCCAACGCT
CCCTTTGACAACACCACCACCACAGCAATCCTGGAGTACAAATACGCCCCCTGTGTTACTAGTCAATCAC
AGGCACGTGCAATCCCCGCGCAGCTGCCAGGATTCAACGACACAGCAACAGCAGCAGCCTTCACAGCTCA
GATGAAGAGTCCTTCAAAAGTTGAAGTACCCCTCGAGGTCGACGAGGACTTGTTCTTCACAGTGGGGTTG
GGACTATTCAACTGCCCAACCTCCACCAACACGCAAAGGTGTCAAGGCCCAAACGGAACACGCTTCACCG
CCAGCATCAACAACGTCTCTTTCGTCTTCCCCAGACAAAACTCCATCATGCAAGCCTATTACCAAGGCAC
TCCCGCGGGCGTTTTCACCACAGACTTCCCTCCTGTTCCTCCAACCACATTTGACTACACAGGAAACGTG
AGCAGAGGGCTATGGCAGCCTACACGCGGAACAAAGGCCTACAAGCTAAAGTACAAGTCCAAAGTACAAG
TCATACTGCAAGACACAAGCATCGTGACCATTGAGAATCACCCAATGCATCTCCACGGGTACGAGTTCTA
TGTAGTTGGGACAGGTATTGGTAACTTCAACGCGAACAAAGACACATCCAGCTTCAACCTCATTGATCCG
CCACGGAGAAACACAATTGGAACCCCTCCTGGTGGATGGATAGCTATCAGATTCGTGGCGGATAACCCTG
GAGTGTGGCTGATGCATTGCCATATAGACGCACATATATTCTGGGGTCTGGCTATGGTCTTTTTGGTTGA
GAACGGTGAAGGGCACTTGCAGTCTGTACAGTCTCCACCATTGGACTTGCCCCAATGTTAA
Upstream Sequence
ATGGAGCAAGTCTGGTTATTCTCTGTGTTGTTGGTTTTTGTAGCTTCACTTGTTAATGCTGAAGTTCACT
TCCATGAGTTCATTATCCAAGAGACGCCGGTGAAGAGGCTGTGCAGAGTTCATAACTCCATCACGGTGAA
TGGAGAGTTTCCAGGTCCAACCTTGGAGGTTAGAAACGGTGATTCTCTTGTCATAACAGCCATTAACAAA
GCTCAGTACAACATCAGCCTCCACTGGCATGGGATAAAGCAGATGAGGAATCCATGGGCGGATGGACCAG
AATACATAACACAATGCCCAATCAAACCAGGAGGGAGTTACACCTACAGATTCAACATCGAAGAACAAGA
AGGTACCTTGTGGTGGCACGCCCACAGCAGATGGCTGAGAGCCACCGTGTACGGAGCTCTCATCATCCGC
CCTCCGCTCTCTTCTCCTCATTACCCTTTCCCAGTTCTCCCCAAGAGAGAAAACCCCATGGATGTACTGA
ACATGGCTCAGTTCACTGGAGCTGCACCAAACGTCTCAGACGCCTTCACCATCAACGGTCAGCCTGGTGA
TTTCTACAGATGCTCCAGCCAAGAAACTTTGAGGTTTCTGGTGGGATCAGGAGAGACCGTCCTCCTCAGG
GTCATCAACTCTGGCTTAAACCAAGAGCTCTTCTTCGGTGTGGCGAATCACAAACTCACAGTGGTTGCTG
CGGATGCCTCCTACACCAAACCTTTCTCCACCAATGTCATAATGTTAGGTCCAGGTCAGACAACTGATGT
GCTTCTAACCGCAGACCAACCGCCAGCACACTACTACATGGCGGCACACGCTTACAACAGCGCCAACGCT
CCCTTTGACAACACCACCACCACAGCAATCCTGGAGTACAAATACGCCCCCTGTGTTACTAGTCAATCAC
AGGCACGTGCAATCCCCGCGCAGCTGCCAGGATTCAACGACACAGCAACAGCAGCAGCCTTCACAGCTCA
GATGAAGAGTCCTTCAAAAGTTGAAGTACCCCTCGAGGTCGACGAGGACTTGTTCTTCACAGTGGGGTTG
GGACTATTCAACTGCCCAACCTCCACCAACACGCAAAGGTGTCAAGGCCCAAACGGAACACGCTTCACCG
CCAGCATCAACAACGTCTCTTTCGTCTTCCCCAGACAAAACTCCATCATGCAAGCCTATTACCAAGGCAC
TCCCGCGGGCGTTTTCACCACAGACTTCCCTCCTGTTCCTCCAACCACATTTGACTACACAGGAAACGTG
AGCAGAGGGCTATGGCAGCCTACACGCGGAACAAAGGCCTACAAGCTAAAGTACAAGTCCAAAGTACAAG
TCATACTGCAAGACACAAGCATCGTGACCATTGAGAATCACCCAATGCATCTCCACGGGTACGAGTTCTA
TGTAGTTGGGACAGGTATTGGTAACTTCAACGCGAACAAAGACACATCCAGCTTCAACCTCATTGATCCG
CCACGGAGAAACACAATTGGAACCCCTCCTGGTGGATGGATAGCTATCAGATTCGTGGCGGATAACCCTG
GAGTGTGGCTGATGCATTGCCATATAGACGCACATATATTCTGGGGTCTGGCTATGGTCTTTTTGGTTGA
GAACGGTGAAGGGCACTTGCAGTCTGTACAGTCTCCACCATTGGACTTGCCCCAATGTTAA
Downstream Sequence
GTGTGTTTATTACTTCCCTCCTTTTTGGTTGTTACTCACATTGAGATGCTCAAGTTACTT
TGTTTTCTTTTGTGTGTTTCCTTTTAGATCCAAGAGACGCCGGTGAAGAGGCTGTGCAGA
GTTCATAACTCCATCACGGTGAATGGAGAGTTTCCAGGTCCAACCTTGGAGGTTAGAAAC
GGTGATTCTCTTGTCATAACAGCCATTAACAAAGCTCAGTACAACATCAGCCTCCACTGG
TAACTCACTCACTCACTCTCCCTTGTATCATATCAATGTTTTTTTTTAATTTATCAAGAT
ACATGTCTGCCACAGGCATGGGATAAAGCAGATGAGGAATCCATGGGCGGATGGACCAGA
ATACATAACACAATGCCCAATCAAACCAGGAGGGAGTTACACCTACAGATTCAACATCGA
AGAACAAGAAGGTACCTTGTGGTGGCACGCCCACAGCAGATGGCTGAGAGCCACCGTGTA
CGGAGCTCTCATCATCCGCCCTCCGCTCTCTTCTCCTCATTACCCTTTCCCAGTTCTCCC
CAAGAGAGAGTTCACTCTACTCTTAGGGGAATGGTGGGACAGAAACCCCATGGATGTACT
GAACATGGCTCAGTTCACTGGAGCTGCACCAAACGTCTCAGACGCCTTCACCATCAACGG
TCAGCCTGGTGATTTCTACAGATGCTCCAGCCAAGGTAAACTTTAGTTTATGCTTCTCAT
GCCTCAAAACAGTGTCAGATACAACTGATATTGTTTTTTTTTTGTCTTAATGTAGAAACT
TTGAGGTTTCTGGTGGGATCAGGAGAGACCGTCCTCCTCAGGGTCATCAACTCTGGCTTA
AACCAAGAGCTCTTCTTCGGTGTGGCGAATCACAAACTCACAGTGGTTGCTGCGGATGCC
TCCTACACCAAACCTTTCTCCACCAATGTCATAATGTTAGGTCCAGGTCAGACAACTGAT
GTGCTTCTAACCGCAGACCAACCGCCAGCACACTACTACATGGCGGCACACGCTTACAAC
AGCGCCAACGCTCCCTTTGACAACACCACCACCACAGCAATCCTGGAGTACAAATACGCC
CCCTGTGTTACTAGTCAATCACAGGCACGTGCAATCCCCGCGCAGCTGCCAGGATTCAAC
GACACAGCAACAGCAGCAGCCTTCACAGCTCAGATGAAGAGTCCTTCAAAAGTTGAAGTA
CCCCTCGAGGTCGACGAGGACTTGTTCTTCACAGTGGGGTTGGGACTATTCAACTGCCCA
ACCTCCACCAACACGCAAAGGTGTCAAGGCCCAAACGGAACACGCTTCACCGCCAGCATC
AACAACGTCTCTTTCGTCTTCCCCAGACAAAACTCCATCATGCAAGCCTATTACCAAGGC
ACTCCCGCGGGCGTTTTCACCACAGACTTCCCTCCTGTTCCTCCAACCACATTTGACTAC
ACAGGAAACGTGAGCAGAGGGCTATGGCAGCCTACACGCGGAACAAAGGCCTACAAGCTA
AAGTACAAGTCCAAAGTACAAGTCATACTGCAAGACACAAGCATCGTGACCATTGAGAAT
CACCCAATGCATCTCCACGGGTACGAGTTCTATGTAGTTGGGACAGGTATTGGTAACTTC
AACGCGAACAAAGACACATCCAGCTTCAACCTCATTGATCCGCCACGGAGAAACACAATT
GGAACCCCTCCTGGTGGATGGATAGCTATCAGATTCGTGGCGGATAACCCTGGAGTGTGG
CTGATGCATTGCCATATAGACGCACATATATTCTGGGGTCTGGCTATGGTCTTTTTGGTT
GAGAACGGTGAAGGGCACTTGCAGTCTGTACAGTCTCCACCATTGGACTTGCCCCAATGT
TAAAGATTCTCTTTATATATACTTTTTTATTTTCCGGTTTTATTTGTTTAGTATTATGGG
ATTCATATTACAAAAAGACAAAAACAAATTACATATTGCTTCTTTTACGATGTTATAACA
TATTAACACACTACAGAAGA
Pro Sequence
MEQVWLFSVLLVFVASLVNAEVHFHEFIIQETPVKRLCRVHNSITVNGEF
PGPTLEVRNGDSLVITAINKAQYNISLHWHGIKQMRNPWADGPEYITQCP
IKPGGSYTYRFNIEEQEGTLWWHAHSRWLRATVYGALIIRPPLSSPHYPF
PVLPKRENPMDVLNMAQFTGAAPNVSDAFTINGQPGDFYRCSSQETLRFL
VGSGETVLLRVINSGLNQELFFGVANHKLTVVAADASYTKPFSTNVIMLG
PGQTTDVLLTADQPPAHYYMAAHAYNSANAPFDNTTTTAILEYKYAPCVT
SQSQARAIPAQLPGFNDTATAAAFTAQMKSPSKVEVPLEVDEDLFFTVGL
GLFNCPTSTNTQRCQGPNGTRFTASINNVSFVFPRQNSIMQAYYQGTPAG
VFTTDFPPVPPTTFDYTGNVSRGLWQPTRGTKAYKLKYKSKVQVILQDTS
IVTIENHPMHLHGYEFYVVGTGIGNFNANKDTSSFNLIDPPRRNTIGTPP
GGWIAIRFVADNPGVWLMHCHIDAHIFWGLAMVFLVENGEGHLQSVQSPP
LDLPQC
mRNA Sequence
ATGGAGCAAGTCTGGTTATTCTCTGTGTTGTTGGTTTTTGTAGCTTCACTTGTTAATGCTGAAGTTCACT
TCCATGAGTTCATTATCCAAGAGACGCCGGTGAAGAGGCTGTGCAGAGTTCATAACTCCATCACGGTGAA
TGGAGAGTTTCCAGGTCCAACCTTGGAGGTTAGAAACGGTGATTCTCTTGTCATAACAGCCATTAACAAA
GCTCAGTACAACATCAGCCTCCACTGGCATGGGATAAAGCAGATGAGGAATCCATGGGCGGATGGACCAG
AATACATAACACAATGCCCAATCAAACCAGGAGGGAGTTACACCTACAGATTCAACATCGAAGAACAAGA
AGGTACCTTGTGGTGGCACGCCCACAGCAGATGGCTGAGAGCCACCGTGTACGGAGCTCTCATCATCCGC
CCTCCGCTCTCTTCTCCTCATTACCCTTTCCCAGTTCTCCCCAAGAGAGAAAACCCCATGGATGTACTGA
ACATGGCTCAGTTCACTGGAGCTGCACCAAACGTCTCAGACGCCTTCACCATCAACGGTCAGCCTGGTGA
TTTCTACAGATGCTCCAGCCAAGAAACTTTGAGGTTTCTGGTGGGATCAGGAGAGACCGTCCTCCTCAGG
GTCATCAACTCTGGCTTAAACCAAGAGCTCTTCTTCGGTGTGGCGAATCACAAACTCACAGTGGTTGCTG
CGGATGCCTCCTACACCAAACCTTTCTCCACCAATGTCATAATGTTAGGTCCAGGTCAGACAACTGATGT
GCTTCTAACCGCAGACCAACCGCCAGCACACTACTACATGGCGGCACACGCTTACAACAGCGCCAACGCT
CCCTTTGACAACACCACCACCACAGCAATCCTGGAGTACAAATACGCCCCCTGTGTTACTAGTCAATCAC
AGGCACGTGCAATCCCCGCGCAGCTGCCAGGATTCAACGACACAGCAACAGCAGCAGCCTTCACAGCTCA
GATGAAGAGTCCTTCAAAAGTTGAAGTACCCCTCGAGGTCGACGAGGACTTGTTCTTCACAGTGGGGTTG
GGACTATTCAACTGCCCAACCTCCACCAACACGCAAAGGTGTCAAGGCCCAAACGGAACACGCTTCACCG
CCAGCATCAACAACGTCTCTTTCGTCTTCCCCAGACAAAACTCCATCATGCAAGCCTATTACCAAGGCAC
TCCCGCGGGCGTTTTCACCACAGACTTCCCTCCTGTTCCTCCAACCACATTTGACTACACAGGAAACGTG
AGCAGAGGGCTATGGCAGCCTACACGCGGAACAAAGGCCTACAAGCTAAAGTACAAGTCCAAAGTACAAG
TCATACTGCAAGACACAAGCATCGTGACCATTGAGAATCACCCAATGCATCTCCACGGGTACGAGTTCTA
TGTAGTTGGGACAGGTATTGGTAACTTCAACGCGAACAAAGACACATCCAGCTTCAACCTCATTGATCCG
CCACGGAGAAACACAATTGGAACCCCTCCTGGTGGATGGATAGCTATCAGATTCGTGGCGGATAACCCTG
GAGTGTGGCTGATGCATTGCCATATAGACGCACATATATTCTGGGGTCTGGCTATGGTCTTTTTGGTTGA
GAACGGTGAAGGGCACTTGCAGTCTGTACAGTCTCCACCATTGGACTTGCCCCAATGTTAA