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Detail for ZS11_C01G19320.t1

Genome:
ZS11: ZS11_C01G19320.t1
ZS11_v0: BnaC01T0173300ZS
WE: WE_A01G15800.t1
WE_v0: BnaA06T0325700WE
Darmor: C01p19130.1_BnaDAR
BH: BnaC01T178800BH
Quinta: BnaC01T0087700QU
ZS2: BnaC01T171600ZS2
SW: BnaC01T182000SW
Express61: C01p015300.1_BnaEXP
Xiaoyun: BnaC01G0162300XY
P202: BnaA01G010610P202.1
BL: BnaC01T178800BH
TA: BnaC01T169900TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g13630D
RB: BnaC01T188400RB
No2127: BnaC01T0069900NO
P130: BnaC01G016740P130.1
Length: 242
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009767(photosynthetic electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
NR Protein: XP_013738783.1
NR E-value: 8.100000e-129
NR Score: 464.9
NR Annotation: XP_013738783.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like [Brassica napus]
SwissProt Protein: Q9T0A4|NDHS_ARATH
SwissProt E-value: 4.040000e-137
SwissProt Score: 388.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhS PE=1 SV=1
CDS Sequence (739 bp)
ATGGCGACTTCTTCGATCACTATACCAACCATTCGGGGCACCAAGTTTCTCGGCCGGACCCATCTCTTTT
CAACTCCAAACCGATCGGTTTTCCCGCCTGCAAAGCACCTATCAAACGTTCATCGAGTAAAGGCCATGGG
TAAGTTCAATCTATGGGAGGTGCTGGGAGGAAGAGGACTATGCAACGGAGAGAAAGGTATCGAGAAGGAG
CTCCAGAGGAACATAGAGGAAGAGTCATCGAAGCCTGAGAACCAGACAAAGAAAGAGAGCGATGACAACA
GCTTGTCCTTCCAAGTTCCTGAAGACGGTTTTGAGAAAGAGATGATGGGCCTCACCGGAGGATTCCCCGG
TGGCGAAAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCTCCACCACCACCAACGAAGCGAGGA
AGCGGTGATGTTGTGTCAGCAATTGGTACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGC
CGGGGATGATAGCTATAGTCAAGAACTCGAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGAT
CACGGACGGGAAAGCTGGCGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAG
GAGCTTGAAAGAAGAGAGAAAGGTCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTG
AACAGATGCAAAAGGAGGCTGCACCATAA
Upstream Sequence
ATGGCGACTTCTTCGATCACTATACCAACCATTCGGGGCACCAAGTTTCTCGGCCGGACCCATCTCTTTT
CAACTCCAAACCGATCGGTTTTCCCGCCTGCAAAGCACCTATCAAACGTTCATCGAGTAAAGGCCATGGG
TAAGTTCAATCTATGGGAGGTGCTGGGAGGAAGAGGACTATGCAACGGAGAGAAAGGTATCGAGAAGGAG
CTCCAGAGGAACATAGAGGAAGAGTCATCGAAGCCTGAGAACCAGACAAAGAAAGAGAGCGATGACAACA
GCTTGTCCTTCCAAGTTCCTGAAGACGGTTTTGAGAAAGAGATGATGGGCCTCACCGGAGGATTCCCCGG
TGGCGAAAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCTCCACCACCACCAACGAAGCGAGGA
AGCGGTGATGTTGTGTCAGCAATTGGTACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGC
CGGGGATGATAGCTATAGTCAAGAACTCGAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGAT
CACGGACGGGAAAGCTGGCGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAG
GAGCTTGAAAGAAGAGAGAAAGGTCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTG
AACAGATGCAAAAGGAGGCTGCACCATAA
Downstream Sequence
AGTTGAAATGTATATGTAAGGTACCTTCAAGGTTTCTGACTGCTTCTAGAAAAGCTTCAG
CATGTGATATAATGATAAATAATAAACGATGAATTCCAAACCATAAAGCATTAATAAGGA
GTAAAAATGTAAAATGCACTCAGCGAGTATAGAAGATAAATCAGTGTATAAGTAAAAAGG
TTTTAAGACTGCAATTGAGTCGCTTTTATTGTGTCCAATGACATCAGTTTTTGAAGAAAC
CAAATCTTTTGAGTATATTCTGTGAATGGCGAAGAGGTGATATGATGTCCACCATTTCTA
TGATCAGATGCAACCTCCCAACTGTGAAAGATTTTCAGAAAAGGACAAAGTTAATAGTTG
GTCTGGCCATTATATGTAGTTACTTAGGAGAATAACCTCAGACATGTGTAAGCAAACTAA
AAAAAGACTTCATTTACAACAACAACAAGTAACGTACCAAAATGGCTTCCATCTCGTCGT
TTGAAACAGGGGTGCGCTTGGGCTGCAACGAGGCCTTCCCGCCTATAGTCGTCTTTGGGG
TGTTGAGGTTGGAGAAGAAGAATGTATCTGCTTCATTTTCCACCTGCTTCGTTCCCTCTG
TAATTTTATCATAAAGGTTAAAACTTTTAATACCCCCCAATGTCACACAGCTTAAACAAA
AAGAAGAGCTCTTGACTTATTCTTTCACTAAATGCTAGACAAATCTTTGTGCAAAGGAGG
TAGACGAAACTATATCTTTCGAAAAGGACAAAGCAAGTGCTGATTTTAAGACATAAACAC
ATCGTGTGCGACGAATCCGTTTTCTTACACAAAATCATAAACGAACTTGTTCTTGGTTAA
ACCATTTTAAAGTCCTAACAATCTAAGAATCTAGAAATACATGCAAATCGATGGATCATT
GGGGGGTATTTTCACGGAACGAAACAGATCGGGGAACATAACATCAAAAGCCAATATGGA
TAGAATCTCGTATCTGATTCACGGGTAATCATGAAACTAGGAGATAGATAGATTCTGCTC
TGCAGCATAGGAGAGAGATCAAAACCTGAAGGTTTGAGGTGACGCTGAGGGAACTTAATG
CGAGGAATCCTCTTCAATCCATGTACGACGTTCATCTCTTCTCTCCCTTCTTGTTCGTTC
GTGTGTTGCCCAATGGAGAATGTTGACGGCGTCTTTGGAAATTTTTTATCTCTCTTCTTC
TTCTTCTTCGAACCTTCTTCGGCTTTCGTTTTCAAGTTTCTACAAGCGTGGGCCATTGTG
CTGTAGTTAAGCCCATTTAAGTTTACAGCCCATTTAATAAGCCCTTTCGATGTTTTCTAT
TTTCCGGTATTCTCCTCCTACTCCTCTCGACTCTTCTGTAGGCCACTCACCAGTGGTCTA
ACTAAGCGACACTGCATTGATTTATCTCTGTCACCCGAATTCCAATATGTTCCTTTCTTT
GGAGTAAATTGAGGTTTTGTGAATTTTAAAATCACTGAATTTAAATTGCAACAAATATAT
AAAAGGTGATATTGGTAAGAACATGCCCAGAGTGAATGTGTGATTGGTAAGAACATGCCC
AATCGCGTGATCATCCTGCCAATTTACCATTTTGTAAGCTATCAAACATATTCTTTTTCT
TTTTTTGGCAAAGTTATCAAACATATTCTTGCTATAGTTTCCATAGATTAATTTTTTTTT
TGTCGCGTCTGTGAATTTCTAATAATATTAACCACACGTGACGGTGGTTTAGTGGCACGT
GAGCTCTGGATTCGAAATGATTTCACTACCCTATCTTATAGCTACATATCTATACAGCAG
AGATGAGTCTATTGTTACGGTCCATTTAAATATTCACATTAAAAATTTATCTGAGTATTG
TATGTTTATTTAGAAATTAGTTTCGATTTTTCCATAGGTTTTAGATACTCACAGATTAAT
AAAAAAATTATACATAATATTATTAGTTTTTATGAGGTCCATTATCTCATTTAATTTGGA
ATTTGTTTTTGAAAGTTTTG
Pro Sequence
MATSSITIPTIRGTKFLGRTHLFSTPNRSVFPPAKHLSNVHRVKAMGKFN
LWEVLGGRGLCNGEKGIEKELQRNIEEESSKPENQTKKESDDNSLSFQVP
EDGFEKEMMGLTGGFPGGEKGLKTFIEQNPPPPPPPTKRGSGDVVSAIGT
EKKPRAPELPLLMPGMIAIVKNSNSPYHMYCGIVQRITDGKAGVLFEGGN
WDRLITFRLEELERREKGPPGKNPKSCVLEPLIEQMQKEAAP
mRNA Sequence
ATGGCGACTTCTTCGATCACTATACCAACCATTCGGGGCACCAAGTTTCTCGGCCGGACCCATCTCTTTT
CAACTCCAAACCGATCGGTTTTCCCGCCTGCAAAGCACCTATCAAACGTTCATCGAGTAAAGGCCATGGG
TAAGTTCAATCTATGGGAGGTGCTGGGAGGAAGAGGACTATGCAACGGAGAGAAAGGTATCGAGAAGGAG
CTCCAGAGGAACATAGAGGAAGAGTCATCGAAGCCTGAGAACCAGACAAAGAAAGAGAGCGATGACAACA
GCTTGTCCTTCCAAGTTCCTGAAGACGGTTTTGAGAAAGAGATGATGGGCCTCACCGGAGGATTCCCCGG
TGGCGAAAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCTCCACCACCACCAACGAAGCGAGGA
AGCGGTGATGTTGTGTCAGCAATTGGTACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGC
CGGGGATGATAGCTATAGTCAAGAACTCGAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGAT
CACGGACGGGAAAGCTGGCGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAG
GAGCTTGAAAGAAGAGAGAAAGGTCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTG
AACAGATGCAAAAGGAGGCTGCACCATAA