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DETAIL

Detail for ZS11_C01G23430.t1

Genome:
ZS11: ZS11_C01G23430.t1
ZS11_v0: BnaC01T0209800ZS
WE: WE_C01G22860.t1
WE_v0: BnaC01T0157100WE
Darmor: C01p23100.1_BnaDAR
BH: BnaC01T213900BH
Quinta: BnaC01T0123400QU
ZS2: BnaA01T175300ZS2
SW: BnaC08T160300SW
Express61: A01p016400.1_BnaEXP
Xiaoyun: BnaA08G0172500XY
P202: BnaA01G012570P202.1
BL: BnaC01T213900BH
TA: BnaC01T205700TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g16470D
RB: BnaA01T180100RB
No2127: BnaA01T0131600NO
P130: BnaC01G020470P130.1
Length: 185
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: GO:0016020(membrane)
Molecular Function: -
KEGG Ortholog: K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
NR Protein: XP_013742546.1
NR E-value: 2.200000e-97
NR Score: 360.1
NR Annotation: XP_013742546.1 uncharacterized protein LOC106445519 isoform X1 [Brassica napus]
SwissProt Protein: -
SwissProt E-value: Not available
SwissProt Score: Not available
SwissProt Annotation: -
CDS Sequence (565 bp)
ATGTCGAGGCTATGGGGGAGAGTAGCCGGATTATTCAGAAGCAAGAGTTTCATCGGAGCAGACATGACTG
GTAACAAGTACTTCTCCAGAATGGAGCAGATTGACGGTCTGGTGAAGGAGAAAAGATGGGTTGTCTTTAG
ACGAGAAGAGGACCCAACCTCTATTCCTGTTGAATGGATATGTTGGCTCAATGGGCAGCGAAAAAGAGCT
CCTACTCCAGAGGAAATGGCTGAACTTGATGCAAGGCGTGAGCGAGTGAGGCTTAATGTTGCTCTTCTCA
AGAAAGAAGAGGAGGAGAAGAAAGCCAAAGAAGGAACTGGACGCAAAATCACGAGCATCGGTAAAGCTGA
GGGTCCAGAATTGACAAGCTTTGTTCGCCATTTCCCAGCGGATTCAAAAGGTGATAAAGCCGAGGAAGCT
AGTAAAGAAGCAGATCAATCAAGGGTCAAGGAACATAAACCCGAGATAGTTACTGCAGAACCGCCTGAAC
CAAAGACAACAGAGCCATCAGGGTCTGGATCATCATTTAGGCCCGGGACATGGCAGCCACCATCTTAA
Upstream Sequence
ATGTCGAGGCTATGGGGGAGAGTAGCCGGATTATTCAGAAGCAAGAGTTTCATCGGAGCAGACATGACTG
GTAACAAGTACTTCTCCAGAATGGAGCAGATTGACGGTCTGGTGAAGGAGAAAAGATGGGTTGTCTTTAG
ACGAGAAGAGGACCCAACCTCTATTCCTGTTGAATGGATATGTTGGCTCAATGGGCAGCGAAAAAGAGCT
CCTACTCCAGAGGAAATGGCTGAACTTGATGCAAGGCGTGAGCGAGTGAGGCTTAATGTTGCTCTTCTCA
AGAAAGAAGAGGAGGAGAAGAAAGCCAAAGAAGGAACTGGACGCAAAATCACGAGCATCGGTAAAGCTGA
GGGTCCAGAATTGACAAGCTTTGTTCGCCATTTCCCAGCGGATTCAAAAGGTGATAAAGCCGAGGAAGCT
AGTAAAGAAGCAGATCAATCAAGGGTCAAGGAACATAAACCCGAGATAGTTACTGCAGAACCGCCTGAAC
CAAAGACAACAGAGCCATCAGGGTCTGGATCATCATTTAGGCCCGGGACATGGCAGCCACCATCTTAAAC
ATATCTCATTTTCACGTAGATAAACAACCAACTGATTCTTTGTGCAATCGTC
Downstream Sequence
GCGAGTATTGTTCCTCCAATCTTACTGTCTTTGGTTTTTCATCCGAGGCTTGTTTTTTTT
TTTTTTTTTAATTCATGGGTTTTGAATTCGATTGATCAGCGATGCTTAAACGAGTCCTAT
TCTACGTGTGATCGTGTAAGAGATCATGTGTGTTGATACTCAATACATATATGAAACTTT
ATTTATAACGTTTCTTGTTTTGTGCGCTTACATGTTCTGATTTGCTTCTTTCTACTTTGC
AGTGAAGGAGAAAAGATGGGTTGTCTTTAGACGAGAAGAGGACCCAACCTCTATTCCTGG
TAACTTTCCTCCTTTCTATCAAATGTTGCTTGTTTCATGGTTTCGTTTGTATTGATGAGC
ATATATGTAAATATATTCATTCTCTCTAGTTACATTGTCTTGTTTGATCAATGTTGTTGT
TGTAGTTGAATGGATATGTTGGCTCAATGGGCAGCGAAAAAGAGCTCCTACTCCAGAGGT
AAGATCAACTCCTCTTTAACCTGATATTATTTTGTAATGAGCATAGCGTTCTTTCACGTT
CATGGTTTCGTTGCATTTAGTATCTGATGTTGGTAATTCTTAATGGTCCAGGAAATGGCT
GAACTTGATGCAAGGCGTGAGCGAGTGAGGCTTAATGTTGCTCGTATGTGTTTCAAGTTT
CTTTATTCATTCTTTACAAGCTACCTATCCTTCTACATGTCCGAACATTTATTTTTCATT
GCTTTCGCTTTCATTGCAAACAGTTTATGACTTTTGGAACGAACCTATACGTTCTGAATG
AACAAAGTCGCTGTTATATTAAAAAGTCAAGAAATTCTTGTGCTTTTATCCATTTGGTGT
CGCTTTAATTTCTTTGTAAATGTTAATTGTTTTTTCTTTTGCCTTCTCAAGTTCTCAAGA
AAGAAGAGGAGGAGAAGAAAGCCAAAGAAGGAACTGGACGCAAAATCACGAGCATCGGTA
AATAACATTTAGAGAGTTCCCACAAAACTTGTTTAATTTGTTTTCTTCATTTATGAAGTG
GACACTTAATGTTGGCTCTCTTTGTGTAAAGGTAAAGCTGAGGGTCCAGAATTGACAAGC
TTTGTTCGCCATTTCCCAGCGGATTCAAAAGGTTCTACATTTTCTCTGTGTCAATTGATT
AAGGGAGTCACCATAAAGTGCTGAAGGCTAGCCTCTTAGGTTTAGTATGATCTGATAAAG
ATTGTTATGGACAGGCATTTACACTTATAACTAAATCTGTCTTGGTAAAGTGTCTTTGGA
ATGACGTCCATATGCGTAATAAGAAATGCTTCTGAGGGAATTGGTGGATGCTTGTTCTGC
TGTTCTGCTGTTCTGCTGTTCTGTGTGTATCTGTTGCAGTGATGATCAGAGTAGTGTTGT
TGTTAACATAAATGAGAAACATATTGTGCATTGCTTTGTGAATTCTGCAGTTATGATGAA
GTAATGATAGTAAAAGTGTTTCTGTACGTCCATTGTGGTTGGGATTAGATTAGAAGGGCA
ATAACAGTTTTTTCTCTTTGTCATTTGTTGATTCTTAGGGTGAGGTTTCTACAGTTGCTA
GTTTTCGTATAACACAATAAATAATTTATTTATTCTGCCAAAACTCATGAAAGTAGGACT
GACAGATTTTTTGTTTGTTTGTTAATGGTTTAAGGTGATAAAGCCGAGGAAGCTAGTAAA
GAAGCAGATCAATCAAGGTAAAATATCTATGCACAAATCATATCTTGTGTTAAATCTTTT
CACTTTGCCGAATGCAAGACACAGCATCTTTCACACCATAACCAAATGTTCTACACGTTG
CTTTTACAGGGTCAAGGAACATAAACCCGAGATAGTTACTGCAGAACCGCCTGAACCAAA
GTAAGTATACCTTTTTAACGTAACACACATATTCAGACTGATGTATATCAAACTTTTAAC
TTCTTTCTAATTGTTACAGACCACTAGCAAGTAGAATCTGTTCTCTGTGCTAATATATTT
TTAGGTATGCTTAAATCCAA
Pro Sequence
MSRLWGRVAGLFRSKSFIGADMTGNKYFSRMEQIDGLVKEKRWVVFRREE
DPTSIPVEWICWLNGQRKRAPTPEEMAELDARRERVRLNVALLKKEEEEK
KAKEGTGRKITSIGKAEGPELTSFVRHFPADSKGDKAEEASKEADQSRVK
EHKPEIVTAEPPEPKTTEPSGSGSSFRPGTWQPPS
mRNA Sequence
ATGTCGAGGCTATGGGGGAGAGTAGCCGGATTATTCAGAAGCAAGAGTTTCATCGGAGCAGACATGACTG
GTAACAAGTACTTCTCCAGAATGGAGCAGATTGACGGTCTGGTGAAGGAGAAAAGATGGGTTGTCTTTAG
ACGAGAAGAGGACCCAACCTCTATTCCTGTTGAATGGATATGTTGGCTCAATGGGCAGCGAAAAAGAGCT
CCTACTCCAGAGGAAATGGCTGAACTTGATGCAAGGCGTGAGCGAGTGAGGCTTAATGTTGCTCTTCTCA
AGAAAGAAGAGGAGGAGAAGAAAGCCAAAGAAGGAACTGGACGCAAAATCACGAGCATCGGTAAAGCTGA
GGGTCCAGAATTGACAAGCTTTGTTCGCCATTTCCCAGCGGATTCAAAAGGTGATAAAGCCGAGGAAGCT
AGTAAAGAAGCAGATCAATCAAGGGTCAAGGAACATAAACCCGAGATAGTTACTGCAGAACCGCCTGAAC
CAAAGACAACAGAGCCATCAGGGTCTGGATCATCATTTAGGCCCGGGACATGGCAGCCACCATCTTAAAC
ATATCTCATTTTCACGTAGATAAACAACCAACTGATTCTTTGTGCAATCGTC