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Detail for ZS11_C01G35680.t1

Genome:
ZS11: ZS11_C01G35680.t1
ZS11_v0: Bnascaffold0050T0000100ZS
WE: WE_C01G35790.t1
WE_v0: BnaC04T0158200WE
Darmor: C04p19570.1_BnaDAR
BH: BnaC04T172800BH
Quinta: BnaC04T0161900QU
ZS2: BnaC04T163300ZS2
SW: BnaC04T169300SW
Express61: Not available
Xiaoyun: BnaA05G0196400XY
P202: BnaC01G056950P202.1
BL: BnaC04T172800BH
TA: BnaC01T301400TA
Da-Ae: Not available
RB: BnaC04T167900RB
No2127: BnaC04T0212300NO
P130: BnaC09G042180P130.1
Length: 356
KOG ID: KOG4845
KOG E-value: Not available
KOG Score: 522.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0042773(ATP synthesis coupled electron transport)
Cellular Component: -
Molecular Function: GO:0008137(NADH dehydrogenase (ubiquinone) activity)
KEGG Ortholog: -
NR Protein: VDD26798.1
NR E-value: 3.100000e-153
NR Score: 546.6
NR Annotation: VDD26798.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q04050|NU4M_BRACM
SwissProt E-value: Not available
SwissProt Score: 523.0
SwissProt Annotation: NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris OX=3711 GN=ND4 PE=3 SV=1
CDS Sequence (1086 bp)
ATGAGAAGTTATGGGAAAGAGTATATTACAACATTTTTAATTCGTCAATTTCTAATGATCGCCGTGTTCT
GCATGCTGGATCTTCTACTATTCTATGTTTTTCCAGAAAGCGTGCCAATCCCTATGTTCACCCCCGGTCA
ATTCCGCTTTGGGGCCACCCCTTACTCTACCATTATTATAGGAGTATGGGGTTCGAGACAAAGAAAGATC
AAGGCAGCATATCAGTTTTTCCTTTATACTTTACTTGGATCTCTTTTTATGCTATTAGCTATTCTGTTGA
CTCTTTTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGTGCCAAAT
CTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTA
CCCGAAGCTCATGTAGAGGCACCTACGGCAGAATCCGTCATCTTGGCAGGAATTCCTTTAAAATTTGGAA
CCCACGGGGTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCGACACTTTGTTCTACTCCTTTCATTTA
TACTTTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTAAAGAAGATC
ATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCGGCGGCCGGAA
TTGGAGGTAGTATTCTACCGATGTTAAGTCATGGACTGGTTCCTTTAGCCCTTTTTCTATGTGTTGGTGT
TCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTTAGTGAGCACCATGCCGAATCTC
TCTACCATTTTCTTTTCTTTTACTTTGGCCGATATGAGTTCACCTGGTAATCTTAATCCAAGACGTTTAG
GAACTATTCAAAGACCACCACAATCAAGGAGAGATGATTTCACCATTGAGATAGAGTCAAGGGTTACTCC
AGTGTCTAGAGCGGCCAATCGCTTAGCTCGCGTAAAGCTGACGAAGTTGAAAAAGAAGGTAGAGGATTTA
ATAGACAAAGGGTTCATCTGA
Upstream Sequence
ATGAGAAGTTATGGGAAAGAGTATATTACAACATTTTTAATTCGTCAATTTCTAATGATCGCCGTGTTCT
GCATGCTGGATCTTCTACTATTCTATGTTTTTCCAGAAAGCGTGCCAATCCCTATGTTCACCCCCGGTCA
ATTCCGCTTTGGGGCCACCCCTTACTCTACCATTATTATAGGAGTATGGGGTTCGAGACAAAGAAAGATC
AAGGCAGCATATCAGTTTTTCCTTTATACTTTACTTGGATCTCTTTTTATGCTATTAGCTATTCTGTTGA
CTCTTTTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGTGCCAAAT
CTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTA
CCCGAAGCTCATGTAGAGGCACCTACGGCAGAATCCGTCATCTTGGCAGGAATTCCTTTAAAATTTGGAA
CCCACGGGGTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCGACACTTTGTTCTACTCCTTTCATTTA
TACTTTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTAAAGAAGATC
ATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCGGCGGCCGGAA
TTGGAGGTAGTATTCTACCGATGTTAAGTCATGGACTGGTTCCTTTAGCCCTTTTTCTATGTGTTGGTGT
TCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTTAGTGAGCACCATGCCGAATCTC
TCTACCATTTTCTTTTCTTTTACTTTGGCCGATATGAGTTCACCTGGTAATCTTAATCCAAGACGTTTAG
GAACTATTCAAAGACCACCACAATCAAGGAGAGATGATTTCACCATTGAGATAGAGTCAAGGGTTACTCC
AGTGTCTAGAGCGGCCAATCGCTTAGCTCGCGTAAAGCTGACGAAGTTGAAAAAGAAGGTAGAGGATTTA
ATAGACAAAGGGTTCATCTGA
Downstream Sequence
GTGCGGAGCGGAGTATCTTATATTCGCTGGGAGAAAACTTTTCCTCTGCAGGGGTCTTGT
GCAGTAAACCCCCCTATGGGCGGTCGTCCGTCGTCGTAAAGTAGTCCCCCGCGAAGCTTT
CGGGAAGAGGGGTAGTCTTGTGTGTAAGCATAGCATTTCTTGTCGAACCCGCCCAATCCA
ACTAAGAAGAACCGAACCTGACAAACACATCTTTTTCCTTTTGGGAGGGTACTCCGAGTA
GTGGGTACCTCGTAGGACCTCGACCCGCCTACTCGGGTCTTGTATGGATAGGCAGGAAGG
GGTGCTACTAGGTGTGTGTAGGGGTTGTGTTTGTTCGCGAGAATGGATTCCTCGTCAAGT
CTGTTTGGGGGGGGGGGGGGGGGGGGGTGTGGACACACTTGCGCGAATTCAGGTAACGTC
TACAAGGGATAAATCAAAAGGAAACTGTACCCGACCAGGGATGGACGTAAACTCGTAAGC
TACCGAGGTTAGGGATAATCGTCCAGGTCTTATTGTGAAACAAAAAAGCCGCCCCGCCAT
AGCAAGCGGGTTGGTTCCTCTGTCGTCGCCGGATAGCTCTTGGCGAGGTACTTTTGTCAC
TCGACATAAAGGAGAGGAGACCTTAGGATAAGTTCCTAAAACAAAGGGGAGCAGAGGATC
GACCCGTTCAGTAGAATTCCGAAGAAAGACTGTTGACAGCTGGTGGAGACATTTCTTTTG
CCCCCGTCAAATCAAAAGGCGTTCCTCGGGCAGGGTTAAGCTCGCAAGAGGGTTCGAGAA
TAGGGTCCTGCCCTTCAGATTCTCAGATAGAAAAAAGAGTTCCAAACCTTTATGCATGCA
CCTCCGTATAAGTGCTGCGTATAAGTTCCGGCCAGGATAATTGGGAAAGATCAAACCCGA
AAGAACCGCTCACATCACAGTAGTAGCGTAAAGGCCGTAAGTCGGGGGGGGGGCGGGGGG
GGGGGCATAACATAAGGTAAGGCTATTACTTTCACATCTCTCTTTCTCTCGTACTATAAG
AAAGAGAGATCCGCTGTGTGAGCAACCCGACTGTGCGTTACATGTGCTCTACAGGCCGCA
CTCCATCTTTCTTCTTAACGAGCCCATTTATCTTTAGATTTTGAAGACGGGCGTTGCGTT
CGGTTTGAAAGGTATGGTTTTCAGTATGTCTCCAGATAGGGCGCCCCACTAGTCCGGCTA
GCTAGTGAGCGGTTCTTTCGGGCAAGAAGCAGGTGCCGGGCCCTATGGGCGGGCATCTCC
CGCAACGAAAGCTACCTAGTTCGCCACCACCCGAAAAGTAAAAGATTAGAGAGTCCAGGC
TAAAAATACATGCATAGATAGTGGTCTAATGACAAGGGCCGACGACGGAAGCTCGGGACG
GAGCCGTATGATGCGGAAGTCTCACGTACGGTTCCCTGAGAAGGGAGTGGCTACCTACTG
GAGCTTCGACCAAGCACCCCCGGTCAATTCCGCTTTGGGGCCACCCCTTACTCTACCATT
ATTATAGGAGTATGGGGTTCGAGACAAAGAAAGATCAAGGCAGCATATCAGTTTTTCCTT
TATACTTTACTTGGATCTCTTTTTATGCTATTAGCTATTCTGTTGACTCTTTTCCAAACA
GGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGTGCCAAATCTTT
CTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATT
TGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGAATCCGTCATCTTGGCAGGAATT
CCTTTAAAATTTGGAACCCACGGGGTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCG
ACACTTTGTTCTACTCCTTTCATTTATACTTTAAGCGCGATTGCTATAATATATACTTCC
TTGACCACTTCAAGACAGATCGATCTAAAGAAGATCATTGCTTACTCCTCAGTAGCCCAT
ATGAATCTGGTGACTATTGG
Pro Sequence
MRSYGKEYITTFLIRQFLMIAVFCMLDLLLFYVFPESVPIPMFTPGQFRF
GATPYSTIIIGVWGSRQRKIKAAYQFFLYTLLGSLFMLLAILLTLFQTGT
TDLQISLTTEFSERCQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTA
ESVILAGIPLKFGTHGVLRFSIPMFPEATLCSTPFIYTLSAIAIIYTSLT
TSRQIDLKKIIAYSSVAHMNLVTIGMFSRAAAGIGGSILPMLSHGLVPLA
LFLCVGVLYDRHKTRLVRYYGGLVSTMPNLSTIFFSFTLADMSSPGNLNP
RRLGTIQRPPQSRRDDFTIEIESRVTPVSRAANRLARVKLTKLKKKVEDL
IDKGFI
mRNA Sequence
ATGAGAAGTTATGGGAAAGAGTATATTACAACATTTTTAATTCGTCAATTTCTAATGATCGCCGTGTTCT
GCATGCTGGATCTTCTACTATTCTATGTTTTTCCAGAAAGCGTGCCAATCCCTATGTTCACCCCCGGTCA
ATTCCGCTTTGGGGCCACCCCTTACTCTACCATTATTATAGGAGTATGGGGTTCGAGACAAAGAAAGATC
AAGGCAGCATATCAGTTTTTCCTTTATACTTTACTTGGATCTCTTTTTATGCTATTAGCTATTCTGTTGA
CTCTTTTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGTGCCAAAT
CTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTA
CCCGAAGCTCATGTAGAGGCACCTACGGCAGAATCCGTCATCTTGGCAGGAATTCCTTTAAAATTTGGAA
CCCACGGGGTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCGACACTTTGTTCTACTCCTTTCATTTA
TACTTTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTAAAGAAGATC
ATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCGGCGGCCGGAA
TTGGAGGTAGTATTCTACCGATGTTAAGTCATGGACTGGTTCCTTTAGCCCTTTTTCTATGTGTTGGTGT
TCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTTAGTGAGCACCATGCCGAATCTC
TCTACCATTTTCTTTTCTTTTACTTTGGCCGATATGAGTTCACCTGGTAATCTTAATCCAAGACGTTTAG
GAACTATTCAAAGACCACCACAATCAAGGAGAGATGATTTCACCATTGAGATAGAGTCAAGGGTTACTCC
AGTGTCTAGAGCGGCCAATCGCTTAGCTCGCGTAAAGCTGACGAAGTTGAAAAAGAAGGTAGAGGATTTA
ATAGACAAAGGGTTCATCTGA