BrassicaPanDB

CDS Sequence (170 bp)

ATGGATCCTATCAAATATTTCACATTTTCTATGATTATTTCTATTTTAGGTATTCGGGGAATCCTCCTTA
ATAGACGAAATATTCCTATTATGTCAATTCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTT
GGTATTTCTGTTTCTTCGGATGATATGA

Upstream Sequence

ATGGATCCTATCAAATATTTCACATTTTCTATGATTATTTCTATTTTAGGTATTCGGGGAATCCTCCTTA
ATAGACGAAATATTCCTATTATGTCAATTCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTT
GGTATTTCTGTTTCTTCGGATGATATGA

Downstream Sequence

ATGGGTCAAGTATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGG
TTAGCCATTTTCGTTATAACTTTCTGAGTCCGAGGGACTATTGCTGTAGAATTTATTAAT
AGCATTCAAGGTTAACCATTCCTCTCCTTTCAGTCGAGACTTCTCCTGGTGGACCTTACA
GTCGAGTCACTTTGTAACTCTTCTCGAATTAGGAAAATATAAAGTTCGAGGAACGCCTTT
CGTTCTCTTTTTTTTCTTGGTCGGCAGGGTCAGGGCCTTTCTCGCTGGGAGAGCGCATCC
GATTCAAAAGTCCTTTCCTAAACCACTTCCCGTTCAGTTGCTGAAAAAGAAATGTGGATA
AGCTTTATAAATGAGATTGAGTTTGACGAATATGGATGCTAGAAAGATGTTATTTGCTGC
TATTCTATCCATTTGTGCATTAAGTTCGAAGAAGATCTCAATCTATAATGAAGAAATGAT
AGTAGCTCTTTGTTTTATAGGCTTAATCATATTCAGTCGTAAGAGTTTAGGTACGACTTT
CAAAGCGACTCTCGACGGGAGAATCCAGGCTATTCAGGAAGAATCGCAGCAATTCCCCAA
TCCTAACGAAATAGTTCCTCCGGAATCCAATGAACAACAACGATTACTTAGGATCAGCTT
GCGAATTTGTGGCACCGTAGTAGAATCATTACCAATGGCACGCTGTGCGCCTAAGTGCGA
AAAGACAGTGCAAGCTTTGTTATGCCGAAACCTAAATGTTAAGTCAGCAACACTTACAAA
TGCCACTTCTTCCCGTCGCATCCATTTTTAGGATGATCTAGTCACAAAGTTTTACACCTT
AGTGGGTAATCAATTTGCTTACTCTTCTATCTCGAAAGCAGAAAGAGTAGAATTCATTCG
AGAGAGCTTGGTGGTCTTAAGAATGGTTCGGGGGGGGGGGGGGGGGTTCGCTTAAGAAGA
GGAATTGAATCTAAATGATGTTCATGCTCTCAGAAGAGCGGATCCAATACCAAGACTACT
TATTTCTCAGGAAGTGCAGCAAGTACTTGAGGAATTTTGGGATATCATGCCCCACGAATT
AGTTGCCAAGTGCGCCCTAGTAGGGCAGTCTACCACAAGATCGAGTTGGAGCCTGGAGCC
AAACCCCCAACTATTTAGACTGGGGCTGGGTTAAGCGGATGGCCCCCCCAACTAGCATCT
ATTAGTTAAGGGGATTGGTTGAACTCAGGAATCAATTTCAAGAACTCATGGAGGCCTATT
TTGATTCCAGCCTCCAAGGCAGTTTTTCCCTATATGGATTGCTGCTGGGAAAAGGTTGGG
GAGCCCCTTTCTAGAAAACGCGGGGAGCCTTGTGCATTGATTATCAGGCGCTCAACAAGG
TAACCTAACTATCAAAAACAATTATCCACTTTTATTGCAGACTTCTTCGCCCGCGCGAGA
TACTTCTTGAAGTTGGATCTACGGCGGGATACTACCAGGTGCATATCGAGGAAGGAGACG
AGCCAAAGACGGCCTGTGTGACAAGCAAGCAACCTTACTAATAAAGGGGCCTTTTCTTGC
TCGTTAACACCCCCTACCCCTATTATATTAGTTAGCCCTCCTTCCTTTACTCTTGGTACC
TAGACACTTTGAATCAAGGCTACGCCCCAGGTCCCTTAGTTCAAGCTCCATCCCACATCC
ATTTGCCCAAACGACGAATAAGCTGCGAAAGAATGAGCTCCTGTCGCAATTGAAGAAGAA
TATGCTGCTAGTCTTTTAGCCACAGACGCTCTTGAGTTAATCTCAGCTGTGGTCCTATCA
GCTCAACCAGTTGCCGGTCTTGTTTGCGTAGTAAATGGTTTTGGCGGAATAGGGTGTTTG
AGAGTAAGCTGCTATTCAAAAATATGGTCTGTCCGTAAGCAATTACCTTTCCTGGCTTGC
TTTAGTCGGTGACTCTATGTCCTCTGCTTTTCAGTCGAGTTGCTAAAGCACCTCTCGCCA
AGACGTCTTTTCCAGTGTCG

Pro Sequence

MDPIKYFTFSMIISILGIRGILLNRRNIPIMSIPIESMLLAVNSNFLVFL
FLRMI

mRNA Sequence

ATGGATCCTATCAAATATTTCACATTTTCTATGATTATTTCTATTTTAGGTATTCGGGGAATCCTCCTTA
ATAGACGAAATATTCCTATTATGTCAATTCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTT
GGTATTTCTGTTTCTTCGGATGATATGA

Genome:
ZS11:	ZS11_C01G35780.t1
ZS11_v0:	BnaA10T0078100ZS
WE:	WE_A04G10230.t1
WE_v0:	BnaC01T0254200WE
Darmor:	C01p34800.1_BnaDAR
BH:	Bnascaffold0318T000300BH
Quinta:	BnaA04T0074500QU
ZS2:	BnaA04T084200ZS2
SW:	BnaA04T089500SW
Express61:	Not available
Xiaoyun:	BnaA04G0084100XY
P202:	Not available
BL:	Bnascaffold0318T000300BH
TA:	Not available
Da-Ae:	Not available
RB:	BnaC01T322400RB
No2127:	BnaC01T0200600NO
P130:	Not available
Length:	55
KOG ID:	KOG4669
KOG E-value:	5.160000e-26
KOG Score:	92.0
KOG Annotation:	Energy production and conversion
Biological Process:	GO:0042773(ATP synthesis coupled electron transport)
Cellular Component:	-
Molecular Function:	GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog:	-
NR Protein:	VDD51059.1
NR E-value:	1.500000e-17
NR Score:	93.2
NR Annotation:	VDD51059.1 unnamed protein product [Brassica oleracea]
SwissProt Protein:	Q04614\|NU4LM_ARATH
SwissProt E-value:	8.420000e-19
SwissProt Score:	75.1
SwissProt Annotation:	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=2 SV=2

DETAIL

Detail for ZS11_C01G35780.t1

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