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Detail for ZS11_C01G41720.t1

Genome:
ZS11: ZS11_C01G41720.t1
ZS11_v0: BnaC05T0315900ZS
WE: WE_A06G24490.t1
WE_v0: BnaC02T0431600WE
Darmor: C09p40190.1_BnaDAR
BH: Bnascaffold0318T000300BH
Quinta: BnaC05T0268500QU
ZS2: BnaA05T190900ZS2
SW: BnaA05T204800SW
Express61: C09p041950.1_BnaEXP
Xiaoyun: BnaC01G0351100XY
P202: Not available
BL: Bnascaffold0318T000300BH
TA: Not available
Da-Ae: Not available
RB: BnaA05T202900RB
No2127: BnaC02T0398500NO
P130: Not available
Length: 101
KOG ID: KOG4669
KOG E-value: 3.910000e-65
KOG Score: 192.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0042773(ATP synthesis coupled electron transport)
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog: -
NR Protein: YP_005090005.1
NR E-value: 4.400000e-44
NR Score: 182.2
NR Annotation: YP_005090005.1 ndhE gene product (chloroplast) [Brassica napus]
SwissProt Protein: A4QL73|NU4LC_DRANE
SwissProt E-value: 8.170000e-67
SwissProt Score: 198.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Draba nemorosa OX=171822 GN=ndhE PE=3 SV=1
CDS Sequence (310 bp)
ATGATACTCGAACATGTACTTGTTTTGAGTGCCTATTTATTTTTGATTGGTCTTTATGGATTGATCACGA
GTCGAAATATGGTTAGGGCTCTTATGTGCCTTGAACTTATACTCAATGCAGTTAATATGAATCTCGTAAC
ATTTGCTGATTTTTTTGATAATTCCCAACTAAAAGGGGATATTTTCTGCATTTTTGTTATAGCAATTGCA
GCCGCTGAAGCAGCTATTGGATTAGCTATAGTCTCGTCAATTTATCGTAACAGAAAATCAACTCGCATCA
ACCAATCGACCTTATTAAATAAGTAG
Upstream Sequence
ATGATACTCGAACATGTACTTGTTTTGAGTGCCTATTTATTTTTGATTGGTCTTTATGGATTGATCACGA
GTCGAAATATGGTTAGGGCTCTTATGTGCCTTGAACTTATACTCAATGCAGTTAATATGAATCTCGTAAC
ATTTGCTGATTTTTTTGATAATTCCCAACTAAAAGGGGATATTTTCTGCATTTTTGTTATAGCAATTGCA
GCCGCTGAAGCAGCTATTGGATTAGCTATAGTCTCGTCAATTTATCGTAACAGAAAATCAACTCGCATCA
ACCAATCGACCTTATTAAATAAGTAG
Downstream Sequence
GCATAAATCAAAAAATTATAGGTTTAAATTTGCATATATGATAGGTTATGACTTACTAGA
TTAAATTTGTGAAAATTTAAGAAATCAAAGTATTTTAGCCCCATTTTTTACCAATTGAGC
CAGAATTAATTAAAAAATTCTATTAAAAGAAATCATTGCTTCATCTAGTATTTTAATTTA
ATATATCATTTAGTTATAAGTTTACTAGATTGAAAATTTATGACATTAAAAAAACTATAG
ATCCTATGTCACATTCAGTAAAAATTTATGATACCTGTATAGGATGTACTCAGTGTGTCC
GAGCATGTCCTACAGACGTATTAGAAATGATACCTTGGGACTGGATCCTCTCGAACCACA
AGAATCCTGAGTTGGAATGGGATTCCAACTCATCACCTTTTGAGATTTTGAGAAGAGTTG
CTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGGAGTTCTTGT
CTATCGTTGGCCTCTATGGTAGAATCAGTCAGGGGCCTGATAGGCGGTGGTTTACCCTGT
GGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAG
CTATATGATAGCACCCAATTTTTTCGATTCGGCAGTTCGATCTATTATTTTTCATTCATG
GACGTTGATAAGATCTTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAG
AGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAG
GGTCCAAGAGTTTTCTAAAACGTTCTTGGTGGAAAAAAATATGAATGAAAGATCCCACTA
AATTGATTTGGGTCCATGAATCTAAGAAATAGTGAGAATTCTTGATCTCTCTCACTATTT
CTCTCAATTCGAAAATCCAGGATTTGAATTGATGTCCTTTCATTGATTCCTCCTAAATTG
CATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGG
ATCCCCACTAAGCATCCATGGCTGAATGGTTAAAGCGCCCAACTCATAATTGGCGAATTC
GTAGGTTCAATTCCTACTGGATGCACGCCAATGGGACCCTCCAATAAGTCTATTGGAATT
GGCTCTGTATCAATGGAATCTTCTCATCATCTATACATAACGAATTGGTGTGGTATATTC
ATATCATAACATAACATATGAACAGTAAGAACTAGCATTCTTATTGAGACTAGAACTCAT
AGGGAAGAAAATCGATTTATGGATGGAATCAAATATGCAGTATTTACAGACAAAAGTATT
CGGTTATTGGGGAAAAATCAATATACTTTTAATGTCGAATCAGGATCAACTAGGACAGAA
ATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGA
CTCCCCGGAAAGGTTAAAAGAATGGGACCTATTCTGGGACATACAATGCATTACGGACGT
ATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAA
ATCAAAATACTTAATAGCATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGC
AATGGAGCCGTAGACAGTCAAGTGAAATCCAATCCACGAAATAATTTGATCTATGGGCAG
CATCATTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGTAAGGCATAGAGGGGGA
GGTCATAAGCGTCTATACCGTAAAATAGATTTTCGACGAAATACAAAAGACATATATGGT
AGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTAT
GGGGATGGTGAGAAGAGATATATTTTACATCCCGGAGGGGCTATAATTGGAGATACCATT
GTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA
ACTATTTGATTTACGTAATT
Pro Sequence
MILEHVLVLSAYLFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFAD
FFDNSQLKGDIFCIFVIAIAAAEAAIGLAIVSSIYRNRKSTRINQSTLLN
K
mRNA Sequence
ATGATACTCGAACATGTACTTGTTTTGAGTGCCTATTTATTTTTGATTGGTCTTTATGGATTGATCACGA
GTCGAAATATGGTTAGGGCTCTTATGTGCCTTGAACTTATACTCAATGCAGTTAATATGAATCTCGTAAC
ATTTGCTGATTTTTTTGATAATTCCCAACTAAAAGGGGATATTTTCTGCATTTTTGTTATAGCAATTGCA
GCCGCTGAAGCAGCTATTGGATTAGCTATAGTCTCGTCAATTTATCGTAACAGAAAATCAACTCGCATCA
ACCAATCGACCTTATTAAATAAGTAG