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Detail for ZS11_C01G41760.t1

Genome:
ZS11: ZS11_C01G41760.t1
ZS11_v0: BnaC09T0318900ZS
WE: WE_C02G01860.t1
WE_v0: Bnascaffold3098T0000200WE
Darmor: C09p40300.1_BnaDAR
BH: BnaC01T364200BH
Quinta: BnaC09T0303500QU
ZS2: Bnascaffold0223T000300ZS2
SW: BnaA06T231400SW
Express61: C09p041940.1_BnaEXP
Xiaoyun: BnaC01G0351400XY
P202: BnaC01G063980P202.1
BL: BnaC01T364200BH
TA: BnaC01T345100TA
Da-Ae: Not available
RB: Bnascaffold0536T000100RB
No2127: BnaC09T0266400NO
P130: BnaC07G037630P130.1
Length: 171
KOG ID: KOG2870
KOG E-value: 3.000000e-119
KOG Score: 343.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H),GO:0048038(quinone binding),GO:0051287(NAD binding)
KEGG Ortholog: -
NR Protein: VDD65598.1
NR E-value: 2.400000e-95
NR Score: 353.2
NR Annotation: VDD65598.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: A4QKG3|NDHH_BARVE
SwissProt E-value: 6.540000e-119
SwissProt Score: 344.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Barbarea verna OX=50458 GN=ndhH PE=3 SV=1
CDS Sequence (523 bp)
ATGTTACGCGCATCCGGAATACCATGGGATCTTCGTAAAGTTGATCGTTATGAGTCTTACGATGAATTTG
AATGGGAAATTCAGTGGCAAAAACAAGGAGATTCATTAGCTCGTTATTTAGTACGACTTAGCGAAATGAC
AGAATCCATCAAAATTATTCAACAGGTTCTGGAAGGACTTCCGGGGGGTCCCTATGAAAATTTAGAAAGC
AGAGGCTTTGATAAAAAAAGGAATCCAGAGTGGAATGATTTTGAATATCGATTCATTAGTAAAAAACCTT
CCCCTACTTTTGAATTATCGAAACAAGAACTTTACGTAAGAGTTGAAGCTCCAAAAGGGGAATTGGGAAT
TTTTCTCATAGGAGATCAAAGTGGTTTTCCTTGGAGATGGAAAATCCGACCGCCGGGTTTTATTAATTTG
CAAATTCTTCCTGAACTAGTTAAAAGAATGAAATTGGCTGATATTATGACGATACTCGGTAGCATAGATA
TAATTATGGGAGAAGTTGATCGTTAA
Upstream Sequence
ATGTTACGCGCATCCGGAATACCATGGGATCTTCGTAAAGTTGATCGTTATGAGTCTTACGATGAATTTG
AATGGGAAATTCAGTGGCAAAAACAAGGAGATTCATTAGCTCGTTATTTAGTACGACTTAGCGAAATGAC
AGAATCCATCAAAATTATTCAACAGGTTCTGGAAGGACTTCCGGGGGGTCCCTATGAAAATTTAGAAAGC
AGAGGCTTTGATAAAAAAAGGAATCCAGAGTGGAATGATTTTGAATATCGATTCATTAGTAAAAAACCTT
CCCCTACTTTTGAATTATCGAAACAAGAACTTTACGTAAGAGTTGAAGCTCCAAAAGGGGAATTGGGAAT
TTTTCTCATAGGAGATCAAAGTGGTTTTCCTTGGAGATGGAAAATCCGACCGCCGGGTTTTATTAATTTG
CAAATTCTTCCTGAACTAGTTAAAAGAATGAAATTGGCTGATATTATGACGATACTCGGTAGCATAGATA
TAATTATGGGAGAAGTTGATCGTTAA
Downstream Sequence
AAATGATAATTTATGCAACAGAAGTACAAACTATAAATTCTTTTCTTAGATTGGAATCTT
TAAAAGAGGTCTATGGACTCATATGGATATTTGTCCCTATATTTTCTCTTGTCTTGGGAA
TCATAACTGGTGTACTAGTAATTGTGTGGTTAGAAAGAGAAATATCTGCAGGGATACAAC
AACGTATTGGACCTGAATACGCCGGCCCGTTAGGAATTCTTCAAGCTTTAGCCGACGGGA
CAAAACTACTTTTCAAAGAAGATCTTCGTCCATCTAGAGGAAATACTCCTTTATTTAGTA
TTGGACCATCTATAGCAGTTATCTCTATTTTACTAAGTTATTCAGTAATTCCTGTTAGCA
ATCACCTTGTTTTAGCGGATCTCAATATCGGTATTTTTTTATGGATTGCCATCTCAAGTG
TTGCTCCGATCGGACTTCTTATGTCAGGATATGGATCAAATAATAAATATTCTTTTTTAG
GTGGTCTGCGAGCTGCTGCTCAAGCGATTAGTTATGAAATACCATTAACTCTATGTGTTT
TATCAATATCTCTACGTGCGATTCGTTGAAACAGAAAGGTTTATTCCGTTTCTTCTAGAT
AAAAAAAAAATGAAAAAAAAAAAAGGAATATATATATTTATCTTTCGGGTTTATCTTAAT
AAAAGGAATTTGATAGTTATATATGAGTGAAAAAAAACTGCTCAGAAATTAGCAGTAAAA
AGAAAAATTAAGTCTCATTTCCTATGTACAAAGGTTAAATGGAAATAAACGTAAGCGTAA
GAATCGCTTTACCCCAAGGTTGGTTGATTAGTCAGCCGGGCTTGAAGCGGGTTAAAAAAA
ATATTAACCGTATGACGTTTTCACTATCAGTTATATAAATTACTATACATATACATATAT
TACAAAGTGATCGGCAATTAGGTAAAAACGCGTGGATGGTTAGAAACACCAAAATACACA
AAGAATTTGTAATAGAGATTAACCAAATTGAAAAGGATATTTATGCATAACATAAGATAA
CAAAAAAAGAAGTTTAATTGGGGCTTGAAATTTGTAGAAATTATCAGGCAGTACTCCCCA
AGATTCCGATTCAGAGTATGCTCCCATCCACCGATAAATGTAATGACTATCAGAAACGAA
ATAATCCTTTATTTTTTTTTAAGTCCACCTACTTTTTTTTCTAAAAAAGAAAGAAGAATA
GGAACGAAACAAGTATATTTTTTTTGATAGATTTCGAAAATAAAATAGAATTTCTATCAT
GAATAAGAAACTAATAGGATGTTTAATTCTTTTTCGTAATTGAAAAACACGACGGGCTGA
AAAACCTAGGTTTATTTTTACAAGGGGTGCTTTATTAAAGGATTAAGTTATTACTCAACA
AATAGAAATTAAAATTTGTAAAGGATGAGATGAATTCCGAAGCGCGTTTTTTAGTTTTAG
AATTTGAGCAGACAGAATTCCATTGGTATAATTCGGGACCCCAGATATATTTCTATTTAA
TCCATTTTAGAACACATCATATCCATCTAAATAATACTAATCTGGTCCTTATATTTATTT
ACGGCCCCCGAGGAGCCGTATGAGGCGAAAACCTCATGTACGGTTTTGTAATAGCGGTGA
GAATAGTAATGTTATCACCGACTAGGATTATCTAACAGTTTAAGTACAGTTGATATAGTT
GAGGCACAATCAAAATATGGTTTTTGGGGATGAAATTTGTGGCGTCAACCTATAGGTTTT
ATCATTTTTCTAATTTCTTCCCTAGCAGAATGCGAGAGGTTACCTTTTGATTTACCAGAA
GCGGAAGAAGAATTAATAGCAGGTTATCAAACTGAATATTCCGGTATCAAATTTGGTTTA
TTTTATGTTGCTTCTTATCTAAATCTATTAATTTCCTCATTATTTGTAACAGTTCTATAC
TTAGGCGGTTGGAATATTTCTATTCCGTATATATCTATGCTGGAGCTATTTGAAAAGGAT
CAAATTTTTGGAACAACAAT
Pro Sequence
MLRASGIPWDLRKVDRYESYDEFEWEIQWQKQGDSLARYLVRLSEMTESI
KIIQQVLEGLPGGPYENLESRGFDKKRNPEWNDFEYRFISKKPSPTFELS
KQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPELVKRM
KLADIMTILGSIDIIMGEVDR
mRNA Sequence
ATGTTACGCGCATCCGGAATACCATGGGATCTTCGTAAAGTTGATCGTTATGAGTCTTACGATGAATTTG
AATGGGAAATTCAGTGGCAAAAACAAGGAGATTCATTAGCTCGTTATTTAGTACGACTTAGCGAAATGAC
AGAATCCATCAAAATTATTCAACAGGTTCTGGAAGGACTTCCGGGGGGTCCCTATGAAAATTTAGAAAGC
AGAGGCTTTGATAAAAAAAGGAATCCAGAGTGGAATGATTTTGAATATCGATTCATTAGTAAAAAACCTT
CCCCTACTTTTGAATTATCGAAACAAGAACTTTACGTAAGAGTTGAAGCTCCAAAAGGGGAATTGGGAAT
TTTTCTCATAGGAGATCAAAGTGGTTTTCCTTGGAGATGGAAAATCCGACCGCCGGGTTTTATTAATTTG
CAAATTCTTCCTGAACTAGTTAAAAGAATGAAATTGGCTGATATTATGACGATACTCGGTAGCATAGATA
TAATTATGGGAGAAGTTGATCGTTAA