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Detail for ZS11_C01G41800.t1

Genome:
ZS11: ZS11_C01G41800.t1
ZS11_v0: BnaA02T0042000ZS
WE: WE_C02G02310.t1
WE_v0: Bnascaffold826T0000500WE
Darmor: BNapus_Darmor_BZH_scaffold_287p00090.1_BnaDAR
BH: BnaC09T203300BH
Quinta: BnaA02T0039800QU
ZS2: BnaC02T374500ZS2
SW: BnaC09T338800SW
Express61: C09p042020.1_BnaEXP
Xiaoyun: BnaC02G0383600XY
P202: BnaC01G064010P202.1
BL: BnaC09T203300BH
TA: BnaA06T214400TA
Da-Ae: Not available
RB: BnaC09T198400RB
No2127: BnaC09T0281100NO
P130: BnaC02G047720P130.1
Length: 229
KOG ID: KOG1687
KOG E-value: 5.450000e-161
KOG Score: 445.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: YP_005089956.1
NR E-value: 8.200000e-123
NR Score: 444.9
NR Annotation: YP_005089956.1 ndhK gene product (chloroplast) [Brassica napus]
SwissProt Protein: A4QLJ8|NDHK_LOBMA
SwissProt E-value: 1.280000e-161
SwissProt Score: 448.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lobularia maritima OX=226051 GN=ndhK PE=3 SV=1
CDS Sequence (699 bp)
ATGAATTCCATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGGTCAAGACTTTCCAGCCTATGGCCGCTTCTTTATGGTACCAGTTGTTGTTTTATTGA
ATTTGCCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTATGGGCTAGTACCAAGATCAAGTCCTAGA
CAGGCGGACCTTATTTTAACAGCAGGTACAGTAACAATGAAAATGGCTCCTTCTTTAGTGAGATTATATG
AACAAATGCCTGAACCAAAGTATGTTATTGCTATGGGAGCGTGTACAATTACAGGGGGGATGTTCAGTAC
CGATTCTTATAGTACTGTTCGAGGGGTTGATAAGCTAATTCCTGTAGATGTCTATTTGCCGGGTTGTCCA
CCTAAACCAGAGGCTGTTATAGACGCTATAACAAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGG
ATCGAATTAGACCTCAACGGGGTAATCGGTGTTTTACTACCAATCACAAGTTTTTTGTTGTACGCAGTAC
ACAGACTGGAAATTATGATCAAGAATTACTCTATCCACCATCATCTACTTCAGAGATCTCTACTGAAACA
TTTTTTAAATACAAAAGCCCAGTATCTTCCCCACGAATTAGTGAATTAGGGAGGATTTGA
Upstream Sequence
ATGAATTCCATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGGTCAAGACTTTCCAGCCTATGGCCGCTTCTTTATGGTACCAGTTGTTGTTTTATTGA
ATTTGCCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTATGGGCTAGTACCAAGATCAAGTCCTAGA
CAGGCGGACCTTATTTTAACAGCAGGTACAGTAACAATGAAAATGGCTCCTTCTTTAGTGAGATTATATG
AACAAATGCCTGAACCAAAGTATGTTATTGCTATGGGAGCGTGTACAATTACAGGGGGGATGTTCAGTAC
CGATTCTTATAGTACTGTTCGAGGGGTTGATAAGCTAATTCCTGTAGATGTCTATTTGCCGGGTTGTCCA
CCTAAACCAGAGGCTGTTATAGACGCTATAACAAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGG
ATCGAATTAGACCTCAACGGGGTAATCGGTGTTTTACTACCAATCACAAGTTTTTTGTTGTACGCAGTAC
ACAGACTGGAAATTATGATCAAGAATTACTCTATCCACCATCATCTACTTCAGAGATCTCTACTGAAACA
TTTTTTAAATACAAAAGCCCAGTATCTTCCCCACGAATTAGTGAATTAGGGAGGATTTGA
Downstream Sequence
GAGAATAAGAAAAAAATCTTCATAAATTAGAACTCATGGTAAATGTGAAATACTTAAATT
TATATAAAAAAGGTGTGGGGGAAATAAAAAAGATGCAGGGCACTTTGTCCGTTTGGCTAG
CCAAACGCGGGCTGGTTCATAGATCGTTGGGCTTCGATTACCAAGGAATAGAGACTTTAC
AAATAAAGCCCGAAGATTGGCATTCTATTGCTGTAATTTTATATGTATATGGTTACAATT
ATTTACGTTCCCAATGTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTGTATC
ATCTTACGAGAATAGAATATGGTGTCAATCAAGCGGAAGAAGTTTGCATAAAAGTATTTA
CTCACAGGAGTAATCCCAGAATTCCATCTGTTTTCGGGTTTGGAAAAGTACGGATTTTCA
AGAACGGGAATCTTATGATATGTTAGGAATCACTTATGATAGCCATCCGCGGCTGAAACG
GATCTTAATGCCCGAAAGTTGGATAGGGTGGCCTTTACGTAAGGATTATATTGCCCCCAA
TTTTTATGAAATACAAGATGCTTATTGAATGATAAAAAATTTGAATGATAAAAATGAGTC
TTAGTTTCTACAACTACGGACCTTCGCGGAATATTTTGAATTCGAGTCGTTTTTAGATCA
AACAAACAGAAGAATTAAGGTCTTATTCATATTATTATAGATAGCTTAATCTCCAATTTG
AAAGATACTTTTTTCCTAAAAGCCGAGCCAATAGGATGAACTAAAAAAAAAAAAAAAGAG
TTCTGCATTATGAACTTTGTATCGCGCACATAACTTAGTCAACTTTAGTCACATAACTGG
GAATGAATAAATAAGATTGGAAAGCAATACAATAAATGGGGGGGTTCAAATTCTATTTCT
ATTGTATCTAATCTAATGAATCTTGGGGGTATTTCTGCCCTTCAACGATAGATACTATAG
ATAGATATAGATAGATAGATATAGATCTTTTTTTTTACTTTTTTTTATTCTTTCAACCAG
AACTTTCCTTTCGAATATGTATTAGGTATAAAGTCTTATACATTTTTTTGAGCGGATGGA
TCCACAACATGAACAAAAAAAAGAGAGGGGGATAAAGGATTATTGCACTTTTTTTACTAA
AGATACGTTTAATTTGAAGACTATAAACTTATCAAAATTAATCAATCCTATGCCAAGAAC
CAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTATCCC
GGCCATTACCGAAGTATCATTCTCATTTTATGAGATGACTTAGGTCTATGTCAATTAAAA
GAAACGCAAAAGTAGTAAATGAAAAAAGTTTTGGACCGGGAATTTATTGGATCTTCGAAA
AGAAGACTTTCTAAGTTTTAGAATGAAAAATTATTTAGATTCGAAATAATTCAAATCGAT
AGTTCTTTCTCATTTGTATATGTATGATATATCCCACAAGACTTGTATATAATAAGAAAA
GAAATTCGAGTTTGTAAAAGTGTCGGATGAATGAAAAAAGATCAATGAATTCTTGAATAA
CTAAAAAAAGGGTAAGGTGTCAAACAGACTTTTTTAGGGAGTAGGGTTGGGGATAGAGGG
ACTTGAACCCTCACGATTTTAAAAGTCAACGGATTTTCATCTTACTATAAATTTCATTGT
TGTCAGTATTGACATGTAGAATGGGACTCTATCTTTATTCTCGTCCGATTAATAAGTTCC
ACCAAGGATCTATCAGACTATGAAGTGAATCGTTTGATTCAACACAAGGGATTGAACTCC
ATTTGTTAGAACAGCTTCCATTGAGTCTCTGCACCTATCCCGCTTTCTAAACTCTGGTTT
GTTCGCGTAACCCAGGATTTGGCTCAGGATTGCCCATTGTTAATTCCAGGGTTTCTCTGA
ATTTGAAAGTTATCACTTAGTAGGTTTCCATACCAAGGCTCAATCCAATTAAGTCCGTAG
CGTCTACCAATTCCGCCATA
Pro Sequence
MNSIKFPVLDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFAS
LIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPK
YVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAI
TKLRKKIAREIYKDRIRPQRGNRCFTTNHKFFVVRSTQTGNYDQELLYPP
SSTSEISTETFFKYKSPVSSPRISELGRI
mRNA Sequence
ATGAATTCCATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGGTCAAGACTTTCCAGCCTATGGCCGCTTCTTTATGGTACCAGTTGTTGTTTTATTGA
ATTTGCCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTATGGGCTAGTACCAAGATCAAGTCCTAGA
CAGGCGGACCTTATTTTAACAGCAGGTACAGTAACAATGAAAATGGCTCCTTCTTTAGTGAGATTATATG
AACAAATGCCTGAACCAAAGTATGTTATTGCTATGGGAGCGTGTACAATTACAGGGGGGATGTTCAGTAC
CGATTCTTATAGTACTGTTCGAGGGGTTGATAAGCTAATTCCTGTAGATGTCTATTTGCCGGGTTGTCCA
CCTAAACCAGAGGCTGTTATAGACGCTATAACAAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGG
ATCGAATTAGACCTCAACGGGGTAATCGGTGTTTTACTACCAATCACAAGTTTTTTGTTGTACGCAGTAC
ACAGACTGGAAATTATGATCAAGAATTACTCTATCCACCATCATCTACTTCAGAGATCTCTACTGAAACA
TTTTTTAAATACAAAAGCCCAGTATCTTCCCCACGAATTAGTGAATTAGGGAGGATTTGA