SEARCH

DETAIL

Detail for ZS11_C01G54340.t1

Genome:
ZS11: ZS11_C01G54340.t1
ZS11_v0: BnaC03T0392900ZS
WE: WE_C03G40600.t1
WE_v0: BnaC03T0325800WE
Darmor: C03p45540.1_BnaDAR
BH: BnaC03T418400BH
Quinta: BnaA03T0315200QU
ZS2: BnaC03T396300ZS2
SW: BnaC03T407200SW
Express61: C03p039100.1_BnaEXP
Xiaoyun: BnaC01G0458800XY
P202: BnaC03G049570P202.1
BL: BnaC03T418400BH
TA: BnaC01T446800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g34900D
RB: BnaA01T395200RB
No2127: BnaC03T0313500NO
P130: BnaC03G037070P130.1
Length: 133
KOG ID: KOG3426
KOG E-value: 5.910000e-95
KOG Score: 270.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
NR Protein: XP_009135218.1
NR E-value: 2.100000e-70
NR Score: 270.0
NR Annotation: XP_009135218.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Brassica rapa]
SwissProt Protein: Q9LHI0|NDUA6_ARATH
SwissProt E-value: 2.510000e-94
SwissProt Score: 270.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=2 SV=1
CDS Sequence (407 bp)
ATGGCGGCACCATTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCGAACCTGACGGAAGCTCGCC
GCCGCGTGTTCGATTTCTTCAGAGCTGCGTGTAGATCCATCCCCACCATCATGGACATTTACAATCTCCA
AGACGTCGTCGCGCCTTCTCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACC
GACCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTTGATCACGCAA
AGCAGCGTCACCACATCATCGGTCAGTACGTGGTGGGCGAAGGGCTCGTGCAGAACACCGGAAGCAAGGA
TCAAGGGAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGA
Upstream Sequence
GTCTACCATTTCAGATGTTTGTTTTCTCAAATCGATTGAATTCGTTACTCTGTTTCTCCTCTCATGAGTT
CTTGGCTCAAGATTTATCGATTTAGCGAGTAAGCAGCAGCGTGTAGAGATCAGAGATGGCGGCACCATTC
ACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCGAACCTGACGGAAGCTCGCCGCCGCGTGTTCGATT
TCTTCAGAGCTGCGTGTAGATCCATCCCCACCATCATGGACATTTACAATCTCCAAGACGTCGTCGCGCC
TTCTCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACCGACCCTAAGGTGATT
GATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTTGATCACGCAAAGCAGCGTCACCACA
TCATCGGTCAGTACGTGGTGGGCGAAGGGCTCGTGCAGAACACCGGAAGCAAGGATCAAGGGAAGTCTGA
TTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTGTTGATTGTTTTCTAATGCTACCAAGTCTC
TCCAGC
Downstream Sequence
GTACTTTCCCCTAATCTCACTCTGATCAATCCCATACCATTTTTTTTTTTTTTAAATTGG
AATCATTTCTTGTTAATTTGATTATTTATTTGATGTTTAGGAGATTGACTTTGCGTTCTA
TTGCACTGTTGACTTTGTTTAATTGTCATTTGTGTTTGAAAGTTGAAAGCTTTTCCCTTT
AGAGTTTTTTAGTGTCATCTGTGTTTGAAAGTTGAAAGCTTTACCTTCGACGTTTAGGGT
TTTTGAAAGTAGCTTATGCCATTAGAGACTTAAATCTTCTTGGTAGTGGAATCTTATGGA
TAATGAAGTGTTGTGTGGATTGGTTTCTCTGAGCAAAAAGGTGGGAGCTTTACTCGTTAC
TCCCTGCTAAAAGCTTTGCTACCATTTGGTTGCTTCTGTATGTGACATCTACACATTTAA
TTCTTTGCGTTGGAATCAGAAGTCCATATGCAGCAGAACCTGCTATGACAATATAGTTAC
TTCGAAGCATAAATGTTTTCTTTCTATTTGTTGCCCTATGTTAAGATTTGCTTGTGTGGC
GATTTGTTTGAACTGTGAACCTTAGTTGAAAGCATCTTCTTTGTGTTTGGGTGCATTGAT
CTCGTGGCCCTCTTTGTTAAGTGCTTTTAGAATGCTATCTGTAGTATTCCTGAAGAAAAT
GTGTTGATTGCTTCTGCAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGAC
TGACATAGTTGATCACGCAAAGCAGCGTCACCACATCATCGGTCAGTACGTGGTGGGCGA
AGGGCTCGTGCAGAACACCGGAAGCAAGGATCAAGGGAAGTCTGATTTTCTCAAGAATTT
CTACACCAGCAACTACTTTTGAACTGTTGATTGTTTTCTAATGCTACCAAGTCTCTCCAG
CACTGTATTTTCGATTCCTTAGGAAGTCTTTCTCTTCCTGAAAATAATTAGTAGTACCTT
TCGATTTGTTCGAGTCCTTTTTAAGTTTTATCTGTGGCAGTCTCTGCTGTGCAAATATTG
CTATGATTTCAAGATACATAACTCTCAGTTTAAATTGAATTCGTCTGTTTGGCTTATGAT
CATCATACAATCAAAGTTTCTGAAAGTATCCCATCTTCTGTCATGTTGGTTACTACCACC
TTACACTGATAAATCTATTGGCTCTCAATATTCAAACACTATGAACAATCACTCTCTCTA
GAAACTACACAACCTTATTGACTAAAGATTACAACACACAACACAATCTCAGGAAACCAT
TTTCAAATCTGCAGTCTTCTTTCCCAAAATATTGCTTCTGGTAAGAATCTGAGAAGAAGG
CCTTTTGCTTTGTGATCTCTTGGAAGGAGTATCCTTTACCGAATTGAGTTTGAAAGATTA
TGTAAAGAGCTGAGCAAAATGCTTGTGTGTTCACTCTCTTGGCCGGGCAAGCCACAAGGA
GCTAAGAGCACGTAGTCGAGATGTATAATCATGTATAGCAAGAAGAGCACGAGCTGACTG
ACGCGTTGTCAACACTCTAATCATCTGTTGCAGAGTCTGCAGCCTCAAGTTATCAGCCTG
TCGGATGAATCCTTCCAAGGTACCTAACTGCCCCATCGCCATTGCCATCTGACCCATATA
GCTAGCGACATTATCAGATGAACTTGAACCAAGAGTTCCACTAGATAAAGTATCAGCTAA
CGACTGCTGTAAACTCTCCATCCCTTGAGACAACGCATCCTCAGCCTGCTGAGACGTCTG
CTGCAAGCTATTTAAGCCCATCACCTGTCGTTCCGTCACTGGCTCCAGCTGATTCGCAAG
AAGCTGCCGTCAAAAGTTTTGAAACCCATTATTTAAGAGTTTGGTTTTATTTCATCAAAG
TAATTCTCTATGGACTTTGTAAAAAGAGCTCAAACCTTGAGAAGTTCGGAAGAACGGAAC
CCGCCAAGCCACAAGAAACATCTCTCGGCTGGTGTTTTCCACATTCCGGAGAGTAAGTGG
AAGACATCGTTCTTGGCTGC
Pro Sequence
MAAPFTLRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVV
APSQLRFAISAQIRNNAHVTDPKVIDLLLFKGMEELTDIVDHAKQRHHII
GQYVVGEGLVQNTGSKDQGKSDFLKNFYTSNYF
mRNA Sequence
GTCTACCATTTCAGATGTTTGTTTTCTCAAATCGATTGAATTCGTTACTCTGTTTCTCCTCTCATGAGTT
CTTGGCTCAAGATTTATCGATTTAGCGAGTAAGCAGCAGCGTGTAGAGATCAGAGATGGCGGCACCATTC
ACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCGAACCTGACGGAAGCTCGCCGCCGCGTGTTCGATT
TCTTCAGAGCTGCGTGTAGATCCATCCCCACCATCATGGACATTTACAATCTCCAAGACGTCGTCGCGCC
TTCTCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACCGACCCTAAGGTGATT
GATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTTGATCACGCAAAGCAGCGTCACCACA
TCATCGGTCAGTACGTGGTGGGCGAAGGGCTCGTGCAGAACACCGGAAGCAAGGATCAAGGGAAGTCTGA
TTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTGTTGATTGTTTTCTAATGCTACCAAGTCTC
TCCAGC