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DETAIL

Detail for ZS11_C01G56320.t1

Genome:
ZS11: ZS11_C01G56320.t1
ZS11_v0: BnaC01T0478100ZS
WE: WE_C01G59230.t1
WE_v0: BnaA01T0295800WE
Darmor: A01p41890.1_BnaDAR
BH: BnaC01T496700BH
Quinta: BnaA01T0307600QU
ZS2: BnaC01T449100ZS2
SW: BnaC01T283700SW
Express61: C01p035510.2_BnaEXP
Xiaoyun: BnaC01G0475500XY
P202: BnaA05G029140P202.1
BL: BnaC01T496700BH
TA: BnaA01T382500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g35760D
RB: BnaC01T461900RB
No2127: BnaA01T0328300NO
P130: BnaC01G055730P130.1
Length: 630
KOG ID: KOG0042
KOG E-value: Not available
KOG Score: 1189.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006072(glycerol-3-phosphate metabolic process)
Cellular Component: GO:0009331(glycerol-3-phosphate dehydrogenase complex)
Molecular Function: GO:0016491(oxidoreductase activity),GO:0004368(glycerol-3-phosphate dehydrogenase (quinone) activity)
KEGG Ortholog: K00111 glpA, glpD; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
NR Protein: XP_013676538.1
NR E-value: Not available
NR Score: 1240.3
NR Annotation: XP_013676538.1 glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like [Brassica napus]
SwissProt Protein: Q9SS48|SDP6_ARATH
SwissProt E-value: Not available
SwissProt Score: 1189.0
SwissProt Annotation: Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDP6 PE=1 SV=1
CDS Sequence (1920 bp)
ATGTCAGTCTCTTCCGTCCGCCGTTTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCG
TCTACCTCTCCCCCTCCGTTGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAATCG
TACTCTCGGCGATCCCTCCGCCTCCGTGCCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACC
TCTTCTAATCCGCTCGACGTCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTG
CGACACGTGGACTCCGCGTAGGTCTCGTGGAGCGCGAGGATTTCTCCTCGGGGACGTCTTCACGTTCAAC
CAAGCTAATCCATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAG
CTTGTCTTCCACGCGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCC
CGTGTATGACACCTTGTTTCGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTT
GGTGGCGGGACCGCGGTTGTTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCT
ACTCTCGCGAGGAAAGGGAAGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATG
ATTCGCGTCTGAACGTTGGGTTGGCTTGTACTGCTTCTTTAGCTGGTGCTGCGGTTCTTAATCACGCTGA
GGTTGTCTCGCTTATTACGGATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACA
GGCAAAGAGTTTGAGAGCTATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGA
AGATGGTTGATGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTGCCTGATTA
CTATTCACCAGAAGGGATGGGTTTGATAGTTCCTAAAACTAAGGATGGTCGCGTTGTGTTCATGTTACCG
TGGTTGGGAAGAACGGTAGCTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATG
AGGATGAGATTCAGTTTATATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGT
TCTCTCGGCTTGGAGTGGTATACGTCCGTTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCA
AGAGACCACGTTGTCTTCGAGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATC
GAAGTATGGCTGAAGATGCGGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGT
AACACAGAAGCTACAGCTTCTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAA
TACGTGCGCATGAAGAAAACATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGC
ATTTGTCTCATGCATACGGTTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAA
ACGGTTGGCGCATGGACATCCGTTTCTTGAAGCAGAGGTTGCGTACTGTGCAAGGCACGAGTACTGCGAG
TCAGCGGTTGATTTTATAGCGAGGAGATGTAGAATAGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGT
TGCAGCGTGTGGTGGAGATTCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGATGCA
GAAGGCTAAAGAGTTTCTTCAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAAC
TGA
Upstream Sequence
TCATCAACTCACCGCACATTTATCCGAAAGGGTGAAAAACGTAATTTAAGGATAATTTGTTATTACAGTG
GATTTTTCATTCATAATCTTCTTCGCTTCCCAATGCAATCCATTCCCTCCACGATCTTCCATGTCAGTCT
CTTCCGTCCGCCGTTTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCGTCTACCTCTC
CCCCTCCGTTGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAATCGTACTCTCGGC
GATCCCTCCGCCTCCGTGCCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACCTCTTCTAATC
CGCTCGACGTCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTGCGACACGTGG
ACTCCGCGTAGGTCTCGTGGAGCGCGAGGATTTCTCCTCGGGGACGTCTTCACGTTCAACCAAGCTAATC
CATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAGCTTGTCTTCC
ACGCGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCCCGTGTATGAC
ACCTTGTTTCGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTTGGTGGCGGGA
CCGCGGTTGTTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCTACTCTCGCGA
GGAAAGGGAAGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATGATTCGCGTCT
GAACGTTGGGTTGGCTTGTACTGCTTCTTTAGCTGGTGCTGCGGTTCTTAATCACGCTGAGGTTGTCTCG
CTTATTACGGATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACAGGCAAAGAGT
TTGAGAGCTATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGAAGATGGTTGA
TGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTGCCTGATTACTATTCACCA
GAAGGGATGGGTTTGATAGTTCCTAAAACTAAGGATGGTCGCGTTGTGTTCATGTTACCGTGGTTGGGAA
GAACGGTAGCTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATGAGGATGAGAT
TCAGTTTATATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGTTCTCTCGGCT
TGGAGTGGTATACGTCCGTTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCAAGAGACCACG
TTGTCTTCGAGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATCGAAGTATGGC
TGAAGATGCGGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGTAACACAGAAG
CTACAGCTTCTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAATACGTGCGCA
TGAAGAAAACATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCA
TGCATACGGTTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAAACGGTTGGCG
CATGGACATCCGTTTCTTGAAGCAGAGGTTGCGTACTGTGCAAGGCACGAGTACTGCGAGTCAGCGGTTG
ATTTTATAGCGAGGAGATGTAGAATAGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGTTGCAGCGTGT
GGTGGAGATTCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGATGCAGAAGGCTAAA
GAGTTTCTTCAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAACTGAAGCTGCC
TGCATCTGAGAAAAATTTAAAAACTACTCTATTTGAATTTATTATTTTCTTCTATTTCCCAATTGTTGGT
GGCTCTTGGGTACTAGCCACTAGAGATGAGGAATAAATGGTATACGGATGGAATAATACTGCCACTACTC
AAATGTTTATTGGATTAAACAGAACTTTGATGTGATGTGATGCGATGGAGG
Downstream Sequence
GGTAAGTAAGATCATCTATTAATTTTTTATATTTTATAGATTGTTTTTCTATTGGTTAGT
TAGATAATGGTTGGTTAGATAAGTAACTCTACATTTTAATTAAATGATTTTATATTTAGT
TTGTGTACATAATTCTAATAACTCGATTAATAAATACTCCTCTTCCCGTTCCTTAAAGAT
ACTCCCTCCGTTTCATAATAGATGAAGTTTTAGTACTTTGCACACATATTAAAAAATTAT
CTTTTCTAAACATAAAATCATTAAAATATAATTTTAAACTAATTTATTTAATTATAAACA
AAAATAATAAAAACACAATTGGCTACACAGTTTTTGATAAAGTTAAAGTTACCTAGATAT
GTGAAAACATCATCTATTGTGAAACAAAAACAATCACCTAAAACATCATCTATATTGAAA
CAGAGGGAGTATATATTATAAAGAAAAATTTTGTTTCTAAAAGATTCATTTTTTACATTT
TCAATGCATGTTTTATTAACTAATTACAAACTTCAAAAATCTTAATTGCACTAATTATTT
TTTTTATTGGCTTAAAATTGTGGAAAAAAAATAGACACAAAAAAATATGCAAATTTAATA
TATTTTATTAAAATGTGTGAAAAAACTAGAATATAGATATTTTATGAACAGAGGGAATAT
TATTTTCATTTAATCTTGTTCTTATTTTTTATAACTAAATATTTATTTGATTAGGAGTTC
GTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAGCTTGTCTTCCACG
CGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCCCGT
GTATGACACCTTGTTTCGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGT
ACGACTTGGTGGCGGGACCGCGGTTGTTGCATCTGTCTAGGTACTACTCTGCGCAAGAGT
CTGCTGAGCTCTTCCCTACTCTCGCGAGGAAAGGGAAGGACAAGAGCTTGAGGGGGACTG
TTGTGTATTACGACGGGCAGATGAATGATTCGCGTCTGAACGTTGGGTTGGCTTGTACTG
CTTCTTTAGCTGGTGCTGCGGTTCTTAATCACGCTGAGGTTGTCTCGCTTATTACGGATG
ATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACAGGTAGTACAATAA
CTTGCAACTTATTGAGTTTAGTATATAACTTCTGCAGTTAATGTGATGGACGCAATGTAA
AAATATCACAAAAAATCGATAGGTAGGCGTTTTATAGGAGATTTTAATGTGATGGACAAT
GTAAAAACATCAAAAAAATATGGATAGGCAGTAATTAGGCGTTTTATAAGAGATTTTGAT
GTGATTGACGCAATGTAAAATATATTAAAAAAAAAAATCATTGATAGGCAGGCGGTAATT
AGGTATTTTATAGGAGATTATTGATTAGGCGGGCGTCTAGACCGGCAATTAGGCGTTTAT
AGGAGATTATGAATTAGGCGGGTGCATAGGCTGATTTTTTGAACACCTAAGCCAATTTAC
AAGAAAAATCGTTTGGTGTAGGTCCGATTGTTGGCATAGTAGGAAGGTATTTGTCTAGAT
GCCGTCTAGACTGATTTTTAGAACTTTTTTTGTTTTGACAGGCAAAGAGTTTGAGAGCTA
TGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGAAGATGGTTGA
TGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTGCCTGATTA
CTATTCACCAGAAGGGATGGGTTTGATAGTTCCTAAAACTAAGGATGGTCGCGTTGTGTT
CATGTTACCGTGGTTGGGAAGAACGGTAGCTGGGACTACAGACTCTAACACGTCAATAAC
TCCGCTTCCTGAACCTCATGAGGATGAGATTCAGTTTATATTGGATGCAATAAGTGACTA
TCTTAACATTAAGGTATGTC
Pro Sequence
MSVSSVRRLAVSAAVIAAASGGAVYLSPSVASSDRAGGGPVLDSLNRTLG
DPSASVPSRSAQESALIKATSSNPLDVLVIGGGATGSGVALDAATRGLRV
GLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK
QLIENAPHLCHALPCMTPCFDWFEVVYYWMGLKMYDLVAGPRLLHLSRYY
SAQESAELFPTLARKGKDKSLRGTVVYYDGQMNDSRLNVGLACTASLAGA
AVLNHAEVVSLITDDDTKRIVGARVRNNLTGKEFESYARVVVNAAGPFCD
SIRKMVDEDTKPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLP
WLGRTVAGTTDSNTSITPLPEPHEDEIQFILDAISDYLNIKVRRTDVLSA
WSGIRPLAMDPTAKSTESISRDHVVFEEHPGLVTITGGKWTTYRSMAEDA
VNAAIKSGKLSPTNGCVTQKLQLLGSHGWEPSSFTALAQQYVRMKKTYGG
KVVPGAMDTAAAKHLSHAYGSMAERVATIAQEEGLGKRLAHGHPFLEAEV
AYCARHEYCESAVDFIARRCRIAFLDTDAAARALQRVVEILASEHKWDKS
REKQEMQKAKEFLQTFKSSKNAQFHDGKHN
mRNA Sequence
TCATCAACTCACCGCACATTTATCCGAAAGGGTGAAAAACGTAATTTAAGGATAATTTGTTATTACAGTG
GATTTTTCATTCATAATCTTCTTCGCTTCCCAATGCAATCCATTCCCTCCACGATCTTCCATGTCAGTCT
CTTCCGTCCGCCGTTTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCGTCTACCTCTC
CCCCTCCGTTGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAATCGTACTCTCGGC
GATCCCTCCGCCTCCGTGCCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACCTCTTCTAATC
CGCTCGACGTCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTGCGACACGTGG
ACTCCGCGTAGGTCTCGTGGAGCGCGAGGATTTCTCCTCGGGGACGTCTTCACGTTCAACCAAGCTAATC
CATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAGCTTGTCTTCC
ACGCGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCCCGTGTATGAC
ACCTTGTTTCGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTTGGTGGCGGGA
CCGCGGTTGTTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCTACTCTCGCGA
GGAAAGGGAAGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATGATTCGCGTCT
GAACGTTGGGTTGGCTTGTACTGCTTCTTTAGCTGGTGCTGCGGTTCTTAATCACGCTGAGGTTGTCTCG
CTTATTACGGATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACAGGCAAAGAGT
TTGAGAGCTATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGAAGATGGTTGA
TGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTGCCTGATTACTATTCACCA
GAAGGGATGGGTTTGATAGTTCCTAAAACTAAGGATGGTCGCGTTGTGTTCATGTTACCGTGGTTGGGAA
GAACGGTAGCTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATGAGGATGAGAT
TCAGTTTATATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGTTCTCTCGGCT
TGGAGTGGTATACGTCCGTTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCAAGAGACCACG
TTGTCTTCGAGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATCGAAGTATGGC
TGAAGATGCGGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGTAACACAGAAG
CTACAGCTTCTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAATACGTGCGCA
TGAAGAAAACATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCA
TGCATACGGTTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAAACGGTTGGCG
CATGGACATCCGTTTCTTGAAGCAGAGGTTGCGTACTGTGCAAGGCACGAGTACTGCGAGTCAGCGGTTG
ATTTTATAGCGAGGAGATGTAGAATAGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGTTGCAGCGTGT
GGTGGAGATTCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGATGCAGAAGGCTAAA
GAGTTTCTTCAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAACTGAAGCTGCC
TGCATCTGAGAAAAATTTAAAAACTACTCTATTTGAATTTATTATTTTCTTCTATTTCCCAATTGTTGGT
GGCTCTTGGGTACTAGCCACTAGAGATGAGGAATAAATGGTATACGGATGGAATAATACTGCCACTACTC
AAATGTTTATTGGATTAAACAGAACTTTGATGTGATGTGATGCGATGGAGG