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Detail for ZS11_C01G59330.t1

Genome:
ZS11: ZS11_C01G59330.t1
ZS11_v0: BnaC01T0504800ZS
WE: WE_C01G55210.t1
WE_v0: BnaC01T0450000WE
Darmor: A05p44080.1_BnaDAR
BH: BnaC01T515600BH
Quinta: BnaC01T0410400QU
ZS2: BnaC01T466000ZS2
SW: BnaC01T295300SW
Express61: A05p034960.1_BnaEXP
Xiaoyun: BnaA01G0411200XY
P202: BnaC01G081880P202.1
BL: BnaC01T515600BH
TA: BnaA01T408300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g38710D
RB: BnaC01T481600RB
No2127: BnaC01T0379200NO
P130: BnaA01G037110P130.1
Length: 159
KOG ID: KOG3382
KOG E-value: 1.370000e-114
KOG Score: 322.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: GO:0016020(membrane)
Molecular Function: -
KEGG Ortholog: K11352 NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
NR Protein: XP_009119053.1
NR E-value: 1.100000e-92
NR Score: 344.4
NR Annotation: XP_009119053.1 PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Brassica rapa]
SwissProt Protein: Q9M9M9|NDUAC_ARATH
SwissProt E-value: 5.800000e-114
SwissProt Score: 322.0
SwissProt Annotation: Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1
CDS Sequence (486 bp)
ATGGCACTGACGGTGGCGAAGAGTGCGTTGGAGACGATTAGAGAGAAAGGTCTGGGCGGTTTCCTCAGGA
TGATCCGTGAAGAAGGCTTCCTGAGATGCCTACCAGATGGGAACCTCTTGCAAACTAAAATACACAACAT
AGGAGCAACTCTTGTTGGTGTGGACAAGTTCGGTAACAAATACTACCAGAAGCTGGGAGATACTCAATAC
GGTAGACACAGATGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAAGTACCAGCGGAATGGC
ACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGCTGTTGAGTCAGAAACCAAAGAGGTATGG
GATTGAGCATAGAGAGAACTTCTCAGGAGAAGGTGATGCATACATTTACCATTCTAAAGGACATACCTTG
AACCCGGGCCAAAAGAACTGGACTCGTTACCAACCTTGGGTTCCCACCAAGACCAAGTAA
Upstream Sequence
TGTCTATTGTATCTGTCGCTTGTTGTGTGTTCGACGTCGAAATCGAATCCCAGACTAGACTCCGAGCAAG
AGAGGTGAAGAGGAACAGCGATGGCACTGACGGTGGCGAAGAGTGCGTTGGAGACGATTAGAGAGAAAGG
TCTGGGCGGTTTCCTCAGGATGATCCGTGAAGAAGGCTTCCTGAGATGCCTACCAGATGGGAACCTCTTG
CAAACTAAAATACACAACATAGGAGCAACTCTTGTTGGTGTGGACAAGTTCGGTAACAAATACTACCAGA
AGCTGGGAGATACTCAATACGGTAGACACAGATGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATC
TCAAGTACCAGCGGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGCTGTTGAGT
CAGAAACCAAAGAGGTATGGGATTGAGCATAGAGAGAACTTCTCAGGAGAAGGTGATGCATACATTTACC
ATTCTAAAGGACATACCTTGAACCCGGGCCAAAAGAACTGGACTCGTTACCAACCTTGGGTTCCCACCAA
GACCAAGTAAGAACGTGAG
Downstream Sequence
TGTAAGCTCTTCTTCCTCTTTCTCAGCTTATTTCATTTTGCGATCTCCTGGATTTGATTG
AATCCCGTAAACCCTAGCAATTGGGTTCTTAAGACAATCTCTCATATGTTCTAATTGGAA
TCGTTTCAATTTTTTGTTTACCTGATTACAGGAGATGCCTACCAGATGGGAACCTCTTGT
AAGCATCTATCTCTTATATTTAGTTCTTTAGAGATTATTTTAAAAAATATGATTCAATTG
ATTGTTCAAGAATCACAATAGAGTTGAAAGGTAGTGTAGTTTAGTTTAAGTTGAATATGT
TTTTCTTATAGGCTCTCTACATAATTGGTGAATTTGGCTGCATTTACATCAACTTTGCTT
AAAGATCATTTCTTTATGCATGCTTTGAATATATGGAGCTTGAATTAACGTTTTTATATT
TTTAATACAGGGATGTTGTGCATATGAATGTGTTAGATTTTGCAAAATATAACATCATTG
GATTCAAGTATTTGCTTAGTAGTGTCATTGGTTCTGCCATTATTGAAAACTATGGTTATA
GACTACTTTGCTAAACATCATGACATCCATCTTTTGTTCGCTTGCTGATTCCGATTGTTA
GTGTATCACATAATATACTTGATTATTGTGTTTTATTTCCACCTTGTTTTTATTTGACCT
TGCTGTTGGGTCATAGTTTCTGATCAATATAAGTTTTGGTGTCTCTTGTTTGATCATTCA
AGGCAAACTAAAATACACAACATAGGAGCAACTCTTGTTGGTGTGGACAAGTTCGGTAAC
AAATACTACCAGAAGCTGGGAGATACTCAATACGGTACGCGCTTCTTCTTTTTAATAACT
TGATTTGTTGTTGCCTGATTAAAGTCATGCTTTTGTTAAATGCTGATGACACTGTAGGTT
TATGATACTAAATATCTTTCTTCCAATAAACTTTATATAGTTGACTTCAGATGTCTTGTC
TACTCTGAATTGTAGCATTTGGCTTAAACATAGAACTTTTTATCCAACAAGCATTTGTTA
GTTGCTAGATCACACCATAATCTGATGACTCAGTAAAGTCGGAGTTAGAGAAGTTGAGCC
TTTTATCCTAATTCACCAGAGATTCAGATAGCCTTGTTTAGGAAATGCCTAAGTTGTTAT
CGAAGCAAAATCAAATCCAGTCTATATGATAGTTTTGGTGAGATTCAGATAGCCTTGTTT
AGGAAATGCCTAAGTTGTTATCGAAGCAAAATCAAATCCAGTCTATATGATAGTTTTGAG
GATATATGTGGTCAACTTCTCCCTTAAAAGATCTTTTATCTGTTGAAGACATTGTGGTGA
AACTATGAATGTGTATATAAAGAGTGTTTAGCCAAGTTGATTTTACATTGAGTCACTTCA
CTAACAGGTAGACACAGATGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATCTCAA
GTACCAGCGGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGGTA
TGAATAAAGCTAATTCCAAATACCCTATCTCGGGTAGTAAATAAGTTGCTTACTAACTTG
AAAACAAACAATGTCTCTCTTTCTTTCTGTTTGAAGCTGTTGAGTCAGAAACCAAAGAGG
TATGGGATTGAGCATAGAGAGAACTTCTCAGGAGAAGGTGATGCATACATTTACCATTCT
AAAGGACATACCTTGAACCCGGGCCAAAAGAACTGGACTCGTTACCAACCTTGGGTTCCC
ACCAAGACCAAGTAAGAACGTGAGAGCTCTGGTTTATACTCTCTGAGAATCTCTCTGAGT
GATTTGTTGTTCTGTTTCTGTCCCTTGAATAGATTTGTTGTTCTGTTTCTGTCTCTTGAA
TAAAAGCAAACTTTTTTGGATCTAAAGCTGAACAATTGGTATTTATGTGAATTGTATAAT
TGTTGTTATGCTGTTTCATCTAATATTTGCTTGCTTAAGCTTTACTTCATCACCTCTAGA
GAGGAGTGTAGAGGACTAAA
Pro Sequence
MALTVAKSALETIREKGLGGFLRMIREEGFLRCLPDGNLLQTKIHNIGAT
LVGVDKFGNKYYQKLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFI
TDHTGDELLSQKPKRYGIEHRENFSGEGDAYIYHSKGHTLNPGQKNWTRY
QPWVPTKTK
mRNA Sequence
TGTCTATTGTATCTGTCGCTTGTTGTGTGTTCGACGTCGAAATCGAATCCCAGACTAGACTCCGAGCAAG
AGAGGTGAAGAGGAACAGCGATGGCACTGACGGTGGCGAAGAGTGCGTTGGAGACGATTAGAGAGAAAGG
TCTGGGCGGTTTCCTCAGGATGATCCGTGAAGAAGGCTTCCTGAGATGCCTACCAGATGGGAACCTCTTG
CAAACTAAAATACACAACATAGGAGCAACTCTTGTTGGTGTGGACAAGTTCGGTAACAAATACTACCAGA
AGCTGGGAGATACTCAATACGGTAGACACAGATGGGTAGAGTACGCATCCAAGGATCGTTACAACGCATC
TCAAGTACCAGCGGAATGGCACGGATGGCTTCATTTCATCACTGATCACACTGGAGATGAGCTGTTGAGT
CAGAAACCAAAGAGGTATGGGATTGAGCATAGAGAGAACTTCTCAGGAGAAGGTGATGCATACATTTACC
ATTCTAAAGGACATACCTTGAACCCGGGCCAAAAGAACTGGACTCGTTACCAACCTTGGGTTCCCACCAA
GACCAAGTAAGAACGTGAG