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Detail for ZS11_C02G02340.t1

Genome:
ZS11: ZS11_C02G02340.t1
ZS11_v0: BnaC02T0020300ZS
WE: WE_C09G74470.t1
WE_v0: BnaA02T0019200WE
Darmor: C02p02330.1_BnaDAR
BH: BnaA02T018800BH
Quinta: BnaC08T0294300QU
ZS2: BnaA02T017600ZS2
SW: BnaA02T018100SW
Express61: C02p001790.1_BnaEXP
Xiaoyun: BnaC02G0016600XY
P202: BnaA02G005250P202.1
BL: BnaA02T018800BH
TA: BnaC02T021500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA02T017900RB
No2127: BnaA02T0018400NO
P130: BnaA02G001420P130.1
Length: 564
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1091.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0052716(hydroquinone:oxygen oxidoreductase activity),GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013674708.1
NR E-value: Not available
NR Score: 1130.9
NR Annotation: XP_013674708.1 laccase-12-like [Brassica napus]
SwissProt Protein: Q9FLB5|LAC12_ARATH
SwissProt E-value: Not available
SwissProt Score: 1091.0
SwissProt Annotation: Laccase-12 OS=Arabidopsis thaliana OX=3702 GN=LAC12 PE=2 SV=1
CDS Sequence (1719 bp)
ATGACCCTTAACACTCTCTCTTTCTCGCTGATATTTTGTTCCCTTCTCTCCGCCTCATCGATTATCGCTA
AAGTTCAACACCATAACTTCGTCATACAAGAGACGCCAGTGAAGAGGCTGTGCAAGACCCGTAACGCTAT
CACCGTCAACGGAATGTTCCCGGGACCAACACTCGAAGTCAATGACGGTGACACTCTTGAAGTCAAAGTC
CATAACCGTGCCCGTTACAATATCACCATCCATTGGCATGGTGTGAGGCAGATGAGAACTGGATGGGCTG
ATGGTCCTGAGTTCGTGACCCAGTGCCCAATCCGACCCGGAAAGAGCTACACGTACCGTTTCACTATCCA
AGGCCAAGAAGGGACATTGTGGTGGCACGCGCATAGCTCCTGGCTCCGAGCCACCGTCTACGGTGCACTC
ATCATCCACCCAGCCCCTGGTTCCTCTTTTCCATTTCCTAAACCGGATCGCCAAACCGCCCTCGTGCTCG
GGGAGTGGTGGAATGCAAACCCGGTTAATGTAATAAACCAAGCGACTCGAACCGGAGCTGCACCAAATGT
ATCCGATGCTTATACCATCAATGGCCAACCCGGTGATCTTTACAATTGTTCAACCAAAGGGACTGTTGTA
GTACCGGTAAATTCAGGTGAAACGAGTCTTCTACGAGTGATCAACGCAGCATTAAACCAACCGCTATTTT
TCACGGTGGCTAACCACAAACTAACGGTGGTCGGAGCCGACGCTTCCTACCTCAAACCATTCACCACAAA
GGTCCTTATGTTAGGTCCGGGCCAAACCACCGACGTACTTCTAACCGCCAACCAACCGCCCAAACGCTAC
TACATAGCATCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGACAACACCACAACTACAGCCATTC
TCCAATACACAAAAACGACAACCACTTCTCCACCAATCATGCCGCCTTTGCCTGCCTTCAACCACACGAA
AACCGTGACGTCATTCTCAAGAAAATTCAAATCTCTTCGAAACGTCGTCGTACCGAAAACAATCGACGAA
AATTTGTTCTTCACCATCGGTTTAGGTCTCGATAAATGTCCCAAGAATTTTCCTAAAAACCGGTGCCAAG
GCTTGAACGGGACCCGGTTTACAGCCTCCATGAACAACGTGTCGTTTGTTCTACCGTCGAATTTCTCACT
CTTGCAAGCACATTCAAACGGAATACCAAACGTTTTCACGACGGATTTTCCAGCTAAACCACCGGTTAAA
TTCGATTATACCGGGAAAAACATAAGCCGGGGTCTGTTTCAGCCGGTTAAGGGTACTAAGCTGTATAAAC
TCAAGTATGGCTCCAGAGTTCAGATTGTTTTACAGGATACGAACATTGTTACGTCGGAGAATCATCCCAT
TCATCTTCATGGTTATGATTTCTACATTGTCGCAGAAGGGTTTGGTAACTTTAACCCCAAGAAAGATAAC
TCTAAGTTTAACCTAGTTGATCCTCCACTTAGAAACACTGTGGCTgttcctgtcaatggatgggctgtta
tcagattcgtggctgataatccagGAGTTTGGTTGATGCGTTGTCACTTGGATGTTCATATCAAGTGGGG
CCTTAGTATGGCGTTTTTGGTCGAGAATGGTGTCGGAGAGTTGGAAACTCTTGAAGCTGCTCCTCATGAT
CTACCTGTGTGCTAG
Upstream Sequence
CTCAAATCCTCTCCTCTCATCTTATCTCTTAATCACCTTACAAAACTTTATATCAAAAACAATAGCTCAA
AGTTTCGAACACACACGATGACCCTTAACACTCTCTCTTTCTCGCTGATATTTTGTTCCCTTCTCTCCGC
CTCATCGATTATCGCTAAAGTTCAACACCATAACTTCGTCATACAAGAGACGCCAGTGAAGAGGCTGTGC
AAGACCCGTAACGCTATCACCGTCAACGGAATGTTCCCGGGACCAACACTCGAAGTCAATGACGGTGACA
CTCTTGAAGTCAAAGTCCATAACCGTGCCCGTTACAATATCACCATCCATTGGCATGGTGTGAGGCAGAT
GAGAACTGGATGGGCTGATGGTCCTGAGTTCGTGACCCAGTGCCCAATCCGACCCGGAAAGAGCTACACG
TACCGTTTCACTATCCAAGGCCAAGAAGGGACATTGTGGTGGCACGCGCATAGCTCCTGGCTCCGAGCCA
CCGTCTACGGTGCACTCATCATCCACCCAGCCCCTGGTTCCTCTTTTCCATTTCCTAAACCGGATCGCCA
AACCGCCCTCGTGCTCGGGGAGTGGTGGAATGCAAACCCGGTTAATGTAATAAACCAAGCGACTCGAACC
GGAGCTGCACCAAATGTATCCGATGCTTATACCATCAATGGCCAACCCGGTGATCTTTACAATTGTTCAA
CCAAAGGGACTGTTGTAGTACCGGTAAATTCAGGTGAAACGAGTCTTCTACGAGTGATCAACGCAGCATT
AAACCAACCGCTATTTTTCACGGTGGCTAACCACAAACTAACGGTGGTCGGAGCCGACGCTTCCTACCTC
AAACCATTCACCACAAAGGTCCTTATGTTAGGTCCGGGCCAAACCACCGACGTACTTCTAACCGCCAACC
AACCGCCCAAACGCTACTACATAGCATCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGACAACAC
CACAACTACAGCCATTCTCCAATACACAAAAACGACAACCACTTCTCCACCAATCATGCCGCCTTTGCCT
GCCTTCAACCACACGAAAACCGTGACGTCATTCTCAAGAAAATTCAAATCTCTTCGAAACGTCGTCGTAC
CGAAAACAATCGACGAAAATTTGTTCTTCACCATCGGTTTAGGTCTCGATAAATGTCCCAAGAATTTTCC
TAAAAACCGGTGCCAAGGCTTGAACGGGACCCGGTTTACAGCCTCCATGAACAACGTGTCGTTTGTTCTA
CCGTCGAATTTCTCACTCTTGCAAGCACATTCAAACGGAATACCAAACGTTTTCACGACGGATTTTCCAG
CTAAACCACCGGTTAAATTCGATTATACCGGGAAAAACATAAGCCGGGGTCTGTTTCAGCCGGTTAAGGG
TACTAAGCTGTATAAACTCAAGTATGGCTCCAGAGTTCAGATTGTTTTACAGGATACGAACATTGTTACG
TCGGAGAATCATCCCATTCATCTTCATGGTTATGATTTCTACATTGTCGCAGAAGGGTTTGGTAACTTTA
ACCCCAAGAAAGATAACTCTAAGTTTAACCTAGTTGATCCTCCACTTAGAAACACTGTGGCTgttcctgt
caatggatgggctgttatcagattcgtggctgataatccagGAGTTTGGTTGATGCGTTGTCACTTGGAT
GTTCATATCAAGTGGGGCCTTAGTATGGCGTTTTTGGTCGAGAATGGTGTCGGAGAGTTGGAAACTCTTG
AAGCTGCTCCTCATGATCTACCTGTGTGCTAGTATCATCATATTCTTAATC
Downstream Sequence
GTACGTCCTCAATATTATACAATAAAAACTGCATGTCCATAGTGATTAATATGTACGTAA
ATGTTATCGTTAGTAGCTAATTGTCTTTGTTTACTTGTGTGTGTGTGCATATGCAATGAT
GAAGATACAAGAGACGCCAGTGAAGAGGCTGTGCAAGACCCGTAACGCTATCACCGTCAA
CGGAATGTTCCCGGGACCAACACTCGAAGTCAATGACGGTGACACTCTTGAAGTCAAAGT
CCATAACCGTGCCCGTTACAATATCACCATCCATTGGTACATATATATATACATTTTGAG
TCATTGAATTTTATTTTTTAAACATAAAACTTTATAAAATTAAATAAATTATGTAATGAT
ATAGAATTAGTAATAATATTTTATTTTTATTTTTTGAATAACAGGCATGGTGTGAGGCAG
ATGAGAACTGGATGGGCTGATGGTCCTGAGTTCGTGACCCAGTGCCCAATCCGACCCGGA
AAGAGCTACACGTACCGTTTCACTATCCAAGGCCAAGAAGGGACATTGTGGTGGCACGCG
CATAGCTCCTGGCTCCGAGCCACCGTCTACGGTGCACTCATCATCCACCCAGCCCCTGGT
TCCTCTTTTCCATTTCCTAAACCGGATCGCCAAACCGCCCTCGTGCTCGGTATATACCGT
ACCATACCAAAATTTTCCATTGCACGATCTACAATTTAACAAATTTTCGATATTTCCAAC
CAAATATAATCTAAATTTTCTAGAGTTTAAATGGTAATTTTGTGTATCAGGGGAGTGGTG
GAATGCAAACCCGGTTAATGTAATAAACCAAGCGACTCGAACCGGAGCTGCACCAAATGT
ATCCGATGCTTATACCATCAATGGCCAACCCGGTGATCTTTACAATTGTTCAACCAAAGG
TAAAAACAAAAATAATACAACATATCTTAGTTAATTATTGAAATGTTAATAATAATATAC
ATTGAACTTTTTAAAATGCAGGGACTGTTGTAGTACCGGTAAATTCAGGTGAAACGAGTC
TTCTACGAGTGATCAACGCAGCATTAAACCAACCGCTATTTTTCACGGTGGCTAACCACA
AACTAACGGTGGTCGGAGCCGACGCTTCCTACCTCAAACCATTCACCACAAAGGTCCTTA
TGTTAGGTCCGGGCCAAACCACCGACGTACTTCTAACCGCCAACCAACCGCCCAAACGCT
ACTACATAGCATCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGACAACACCACAA
CTACAGCCATTCTCCAATACACAAAAACGACAACCACTTCTCCACCAATCATGCCGCCTT
TGCCTGCCTTCAACCACACGAAAACCGTGACGTCATTCTCAAGAAAATTCAAATCTCTTC
GAAACGTCGTCGTACCGAAAACAATCGACGAAAATTTGTTCTTCACCATCGGTTTAGGTC
TCGATAAATGTCCCAAGAATTTTCCTAAAAACCGGTGCCAAGGCTTGAACGGGACCCGGT
TTACAGCCTCCATGAACAACGTGTCGTTTGTTCTACCGTCGAATTTCTCACTCTTGCAAG
CACATTCAAACGGAATACCAAACGTTTTCACGACGGATTTTCCAGCTAAACCACCGGTTA
AATTCGATTATACCGGGAAAAACATAAGCCGGGGTCTGTTTCAGCCGGTTAAGGGTACTA
AGCTGTATAAACTCAAGTATGGCTCCAGAGTTCAGATTGTTTTACAGGATACGAACATTG
TTACGTCGGAGAATCATCCCATTCATCTTCATGGTTATGATTTCTACATTGTCGCAGAAG
GGTTTGGTAACTTTAACCCCAAGAAAGATAACTCTAAGTTTAACCTAGTTGATCCTCCAC
TTAGAAACACTGTGGCTgttcctgtcaatggatgggctgttatcagattcgtggctgata
atccaggtaattacaaaaacttattgacatatgtaataatagttgttacattttgattta
ggaaaaataaatgttttctt
Pro Sequence
MTLNTLSFSLIFCSLLSASSIIAKVQHHNFVIQETPVKRLCKTRNAITVN
GMFPGPTLEVNDGDTLEVKVHNRARYNITIHWHGVRQMRTGWADGPEFVT
QCPIRPGKSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPAPGSSF
PFPKPDRQTALVLGEWWNANPVNVINQATRTGAAPNVSDAYTINGQPGDL
YNCSTKGTVVVPVNSGETSLLRVINAALNQPLFFTVANHKLTVVGADASY
LKPFTTKVLMLGPGQTTDVLLTANQPPKRYYIASRAYQSAQNAPFDNTTT
TAILQYTKTTTTSPPIMPPLPAFNHTKTVTSFSRKFKSLRNVVVPKTIDE
NLFFTIGLGLDKCPKNFPKNRCQGLNGTRFTASMNNVSFVLPSNFSLLQA
HSNGIPNVFTTDFPAKPPVKFDYTGKNISRGLFQPVKGTKLYKLKYGSRV
QIVLQDTNIVTSENHPIHLHGYDFYIVAEGFGNFNPKKDNSKFNLVDPPL
RNTVAVPVNGWAVIRFVADNPGVWLMRCHLDVHIKWGLSMAFLVENGVGE
LETLEAAPHDLPVC
mRNA Sequence
CTCAAATCCTCTCCTCTCATCTTATCTCTTAATCACCTTACAAAACTTTATATCAAAAACAATAGCTCAA
AGTTTCGAACACACACGATGACCCTTAACACTCTCTCTTTCTCGCTGATATTTTGTTCCCTTCTCTCCGC
CTCATCGATTATCGCTAAAGTTCAACACCATAACTTCGTCATACAAGAGACGCCAGTGAAGAGGCTGTGC
AAGACCCGTAACGCTATCACCGTCAACGGAATGTTCCCGGGACCAACACTCGAAGTCAATGACGGTGACA
CTCTTGAAGTCAAAGTCCATAACCGTGCCCGTTACAATATCACCATCCATTGGCATGGTGTGAGGCAGAT
GAGAACTGGATGGGCTGATGGTCCTGAGTTCGTGACCCAGTGCCCAATCCGACCCGGAAAGAGCTACACG
TACCGTTTCACTATCCAAGGCCAAGAAGGGACATTGTGGTGGCACGCGCATAGCTCCTGGCTCCGAGCCA
CCGTCTACGGTGCACTCATCATCCACCCAGCCCCTGGTTCCTCTTTTCCATTTCCTAAACCGGATCGCCA
AACCGCCCTCGTGCTCGGGGAGTGGTGGAATGCAAACCCGGTTAATGTAATAAACCAAGCGACTCGAACC
GGAGCTGCACCAAATGTATCCGATGCTTATACCATCAATGGCCAACCCGGTGATCTTTACAATTGTTCAA
CCAAAGGGACTGTTGTAGTACCGGTAAATTCAGGTGAAACGAGTCTTCTACGAGTGATCAACGCAGCATT
AAACCAACCGCTATTTTTCACGGTGGCTAACCACAAACTAACGGTGGTCGGAGCCGACGCTTCCTACCTC
AAACCATTCACCACAAAGGTCCTTATGTTAGGTCCGGGCCAAACCACCGACGTACTTCTAACCGCCAACC
AACCGCCCAAACGCTACTACATAGCATCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGACAACAC
CACAACTACAGCCATTCTCCAATACACAAAAACGACAACCACTTCTCCACCAATCATGCCGCCTTTGCCT
GCCTTCAACCACACGAAAACCGTGACGTCATTCTCAAGAAAATTCAAATCTCTTCGAAACGTCGTCGTAC
CGAAAACAATCGACGAAAATTTGTTCTTCACCATCGGTTTAGGTCTCGATAAATGTCCCAAGAATTTTCC
TAAAAACCGGTGCCAAGGCTTGAACGGGACCCGGTTTACAGCCTCCATGAACAACGTGTCGTTTGTTCTA
CCGTCGAATTTCTCACTCTTGCAAGCACATTCAAACGGAATACCAAACGTTTTCACGACGGATTTTCCAG
CTAAACCACCGGTTAAATTCGATTATACCGGGAAAAACATAAGCCGGGGTCTGTTTCAGCCGGTTAAGGG
TACTAAGCTGTATAAACTCAAGTATGGCTCCAGAGTTCAGATTGTTTTACAGGATACGAACATTGTTACG
TCGGAGAATCATCCCATTCATCTTCATGGTTATGATTTCTACATTGTCGCAGAAGGGTTTGGTAACTTTA
ACCCCAAGAAAGATAACTCTAAGTTTAACCTAGTTGATCCTCCACTTAGAAACACTGTGGCTgttcctgt
caatggatgggctgttatcagattcgtggctgataatccagGAGTTTGGTTGATGCGTTGTCACTTGGAT
GTTCATATCAAGTGGGGCCTTAGTATGGCGTTTTTGGTCGAGAATGGTGTCGGAGAGTTGGAAACTCTTG
AAGCTGCTCCTCATGATCTACCTGTGTGCTAGTATCATCATATTCTTAATC