SEARCH

DETAIL

Detail for ZS11_C02G08480.t1

Genome:
ZS11: ZS11_C02G08480.t1
ZS11_v0: BnaC02T0076800ZS
WE: WE_C02G11480.t1
WE_v0: BnaA02T0066000WE
Darmor: A02p03820.1_BnaDAR
BH: BnaA02T074800BH
Quinta: BnaA02T0063700QU
ZS2: BnaC02T073600ZS2
SW: BnaA02T076200SW
Express61: A02p006240.1_BnaEXP
Xiaoyun: BnaA02G0066900XY
P202: BnaA03G006420P202.1
BL: BnaA02T074800BH
TA: BnaA02T047300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11580D
RB: BnaA02T074600RB
No2127: BnaA02T0065900NO
P130: BnaA02G006080P130.2
Length: 575
KOG ID: KOG2495
KOG E-value: Not available
KOG Score: 1039.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006116(NADH oxidation)
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity),GO:0003954(NADH dehydrogenase activity)
KEGG Ortholog: K17871 ndh1; NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]
NR Protein: XP_013674947.1
NR E-value: Not available
NR Score: 1151.7
NR Annotation: XP_013674947.1 external alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [Brassica napus]
SwissProt Protein: Q9SKT7|NDB4_ARATH
SwissProt E-value: Not available
SwissProt Score: 1039.0
SwissProt Annotation: External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB4 PE=1 SV=1
CDS Sequence (1752 bp)
ATGAGTACCCGTAGCttctgcaagagagCTTACAGCTTCTTCAAGGCTTACCCTTCTGCTTCCAAGCTTC
TTCTTCTCAGTACCTGCAGCGGTGGCGGTCTACTAGTGTATTCAGACTCGAGTCCATCGAAGCGTACATT
AACAGCAGATGGCCAAGAGATCAAGGAGAAGAAGGTGGTTGTTCTCGGGAGTGGATGGAGCGGCTACAGC
TTCTTGAGCCACTTCAACAACCCTAACTACGACGTTCAAGTTGTCTCTCCTCGTAACTTTTTCCTCTTCA
CCCCTCTCTTGCCAAGTGTCACCAACGGCACCGTTGAAGCTCGTAGCATTGTTGAACCCATCCGTGGCCT
TATGCGCAAGAAAGGATTTGAGTACACAGAGGCAGAGTGTGTCAAGATCGATCCATCCAACAAGAAGATC
CATTGCAAGTCAAAGGATAGCACAAGCCTCAAAGGCACAACAGAGTTTGACATTGACTACGACATTCTAG
TCATAGCTGTTGGAGCCAAGCCCAACACATTCAACACCCCTGGAGTTGAGGAACACGCCCATTTCCTAAA
GGAAGCAGAGGATGCTCTCAAGATTCGTCGCTCAGTCATAAACTGTTTCGAGAGAGCGTCTCTTCCTGAT
CTAACCGAAGAAGAGAGGAAAAAGATTCTTCACTTCGTTGTGGTTGGTGGAGGACCAACCGGTGTCGAGT
TCTCAGCTGAGCTACATGACTTCTTGGTCGAGGATGTGGCTAAGATATACCCAAAGGTGCAAGAGTTCAC
GAGAATCACTCTTCTTGAAGCAGGAGACCACATTCTCAACATGTTTGACAAGAGGATCACTGCCTTTGCT
GAGGAGAAGTTCCAGAGAGACGGTATTGATTTGAAGACAAAGAACATGGTTGTGGGAGTGACTGCTGACG
AGATATCTACAAAGGAAAGGGGGAGTGGTGAAGTTGTGTCTGAGCCTTATGGTATGGTTGTGTGGTCAAC
AGGTATTGGTTCACGTCCTGTCATCAAGGACTTTATGCATCAGATTGGTCAGGGTCAGAGACGTGTCTTG
GCAACTGATGAATGGCTTAGAGTGGAGGGATGTGATAGTGTTTATGCTTTAGGTGACACTGCAACCATCA
ACCAACGCAGAGTCATGGAAGATATAGCTGCAATATTCGGTAAAGCAGACAAGGGAGAGACAGGAACACT
GAACAAGAAAGAGTTCAAAGGTGTGGTGAAAGACATTTGCCAGAGGTACCCTCAAGTGGAGCTTTACTTG
AAGAAGAAGAAACTTAGAAACATTGCAAACTTGCTCAAGAGTGCGAATGGCGATAACACAGAGCTCAGCA
TCGAAACGTTTAAGCAAGCTCTCTCAGAAGTTGATACACAAATGAAAAATCTTCCAGCTACTGCCCAGGT
TGCATCACAACAAGGGAAGTACCTTGCTAAGTGCTTCAACAAAATGGAAAAATGTGAGAATAAGCCAGAG
GGACCATTGAGGTTCAGAGGAGAAGGTCGACACCGGTTCCAGCCGTTTAGGTACAGACATTTCGGATCGT
TTGCTCCGCTTGGAGGGGAGCAGACAGCAGCTGAACTGCCTGGAGATTGGGTTTCCATTGGTCACAGCAG
CCAATGGCTGTGGTACTCTGTTTACGCCAGCAAGCTGGTGAGCTGGCGCACAAGGTCGCTTGTAGTCTCT
GACTGGGTTCGACGCTTTATCTTTGGTCGTGACTCCAGCAGCATCTAA
Upstream Sequence
ATGAGTACCCGTAGCttctgcaagagagCTTACAGCTTCTTCAAGGCTTACCCTTCTGCTTCCAAGCTTC
TTCTTCTCAGTACCTGCAGCGGTGGCGGTCTACTAGTGTATTCAGACTCGAGTCCATCGAAGCGTACATT
AACAGCAGATGGCCAAGAGATCAAGGAGAAGAAGGTGGTTGTTCTCGGGAGTGGATGGAGCGGCTACAGC
TTCTTGAGCCACTTCAACAACCCTAACTACGACGTTCAAGTTGTCTCTCCTCGTAACTTTTTCCTCTTCA
CCCCTCTCTTGCCAAGTGTCACCAACGGCACCGTTGAAGCTCGTAGCATTGTTGAACCCATCCGTGGCCT
TATGCGCAAGAAAGGATTTGAGTACACAGAGGCAGAGTGTGTCAAGATCGATCCATCCAACAAGAAGATC
CATTGCAAGTCAAAGGATAGCACAAGCCTCAAAGGCACAACAGAGTTTGACATTGACTACGACATTCTAG
TCATAGCTGTTGGAGCCAAGCCCAACACATTCAACACCCCTGGAGTTGAGGAACACGCCCATTTCCTAAA
GGAAGCAGAGGATGCTCTCAAGATTCGTCGCTCAGTCATAAACTGTTTCGAGAGAGCGTCTCTTCCTGAT
CTAACCGAAGAAGAGAGGAAAAAGATTCTTCACTTCGTTGTGGTTGGTGGAGGACCAACCGGTGTCGAGT
TCTCAGCTGAGCTACATGACTTCTTGGTCGAGGATGTGGCTAAGATATACCCAAAGGTGCAAGAGTTCAC
GAGAATCACTCTTCTTGAAGCAGGAGACCACATTCTCAACATGTTTGACAAGAGGATCACTGCCTTTGCT
GAGGAGAAGTTCCAGAGAGACGGTATTGATTTGAAGACAAAGAACATGGTTGTGGGAGTGACTGCTGACG
AGATATCTACAAAGGAAAGGGGGAGTGGTGAAGTTGTGTCTGAGCCTTATGGTATGGTTGTGTGGTCAAC
AGGTATTGGTTCACGTCCTGTCATCAAGGACTTTATGCATCAGATTGGTCAGGGTCAGAGACGTGTCTTG
GCAACTGATGAATGGCTTAGAGTGGAGGGATGTGATAGTGTTTATGCTTTAGGTGACACTGCAACCATCA
ACCAACGCAGAGTCATGGAAGATATAGCTGCAATATTCGGTAAAGCAGACAAGGGAGAGACAGGAACACT
GAACAAGAAAGAGTTCAAAGGTGTGGTGAAAGACATTTGCCAGAGGTACCCTCAAGTGGAGCTTTACTTG
AAGAAGAAGAAACTTAGAAACATTGCAAACTTGCTCAAGAGTGCGAATGGCGATAACACAGAGCTCAGCA
TCGAAACGTTTAAGCAAGCTCTCTCAGAAGTTGATACACAAATGAAAAATCTTCCAGCTACTGCCCAGGT
TGCATCACAACAAGGGAAGTACCTTGCTAAGTGCTTCAACAAAATGGAAAAATGTGAGAATAAGCCAGAG
GGACCATTGAGGTTCAGAGGAGAAGGTCGACACCGGTTCCAGCCGTTTAGGTACAGACATTTCGGATCGT
TTGCTCCGCTTGGAGGGGAGCAGACAGCAGCTGAACTGCCTGGAGATTGGGTTTCCATTGGTCACAGCAG
CCAATGGCTGTGGTACTCTGTTTACGCCAGCAAGCTGGTGAGCTGGCGCACAAGGTCGCTTGTAGTCTCT
GACTGGGTTCGACGCTTTATCTTTGGTCGTGACTCCAGCAGCATCTAA
Downstream Sequence
GTCTCTCCTTTAGTTTCCTTTACAAGTACACACCTTGTTTAGCTCTTATATATACGTGTG
TATATATACTTTGACTGGTTCATTAGATCTGGTTTTCGTAACATCTTAGGGTTTCTATCT
TTGTCATCTCTCTCTCTCTCTGACCTTTGTCGTATCATGTCTTTTTTTTTCCAGCGGTGG
CGGTCTACTAGTGTATTCAGACTCGAGTCCATCGAAGCGTACATTAACAGCAGATGGCCA
AGAGATCAAGGAGAAGAAGGTGGTTGTTCTCGGGAGTGGATGGAGCGGCTACAGCTTCTT
GAGCCACTTCAACAACCCTAACTACGACGTTCAAGTTGTCTCTCCTCGTAACTTTTTCCT
CTTCACCCCTCTCTTGCCAAGTGTCACCAACGGCACCGTTGAAGCTCGTAGCATTGTTGA
ACCCATCCGTGGCCTTATGCGCAAGGTAGGTAACCCCATATTCTAACCAGAACACTTCCT
GAGATTTGAGATTTTTGTCCCCTATTTGAAAAATATTTattaaatatttaatatttttat
aaacttacaaatagtttttaattagaaaaacataatttttgtagtagacttgtatctaaa
ttttaataatataaaattcacttaaaatatttttatAAACTAATTTTTATTTTTACAGGT
AATATTTTTAGGGAAACAGACAAAAATAGTACTAAATCAAGTTTTTGTTCCCAAACTAAC
ACTCAAGATCAAAAGTCACAAAAATAGCACTTAATGTTTTATCAAAAGTCACAAACTTAA
GGTTTTGAGTTAAAGGGTGGGGTTTGGGGTTTGGGGTTTGGGGTTTGGGGTTTGGGGTTT
GGGGTTTGGGGTTTGGGGTTTGGGGTTTGGGGTTTAGGGTTTAGGGTTTAGGGTTTAGGG
TTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTA
GAGTtgagaaatgagtttttggggataagatttcaaattttgaaaaataaaaattaaaat
tttcaaaagataaacttagaaatgtgctattttggtcattttagttttagAGTGCTATTT
TTGTGATATAAACTTAGAAATGTGCTATTTTAGAGATTTGCCCATATTTATATGTTATTA
TACAAAAATACAAATACATATGAACTTTTTACTCTTATATTCATTACCTTTTCATGCTTT
TGCCTGATTCTGTCCTAATCTATCCCAGAAAGGATTTGAGTACACAGAGGCAGAGTGTGT
CAAGATCGATCCATCCAACAAGAAGATCCATTGCAAGTCAAAGGATAGCACAAGCCTCAA
AGGCACAACAGAGTTTGACATTGACTACGACATTCTAGTCATAGCTGTTGGAGCCAAGCC
CAACACATTCAACACCCCTGGAGTTGAGGAACACGCCCATTTCCTAAAGGAAGCAGAGGA
TGCTCTCAAGATTCGTCGCTCAGTCATAAACTGTTTCGAGAGAGCGTCTCTTCCTGATCT
AACCGAAGAAGAGAGGAAAAAGATTCTTCACTTCGTTGTGGTTGGTGGAGGACCAACCGG
TGTCGAGTTCTCAGCTGAGCTACATGACTTCTTGGTCGAGGATGTGGCTAAGATATACCC
AAAGGTGCAAGAGTTCACGAGAATCACTCTTCTTGAAGCAGGAGACCACATTCTCAACAT
GTTTGACAAGAGGATCACTGCCTTTGCTGAGGAGAAGTTCCAGAGAGACGGTATTGATTT
GAAGACAAAGAACATGGTTGTGGGAGTGACTGCTGACGAGATATCTACAAAGGAAAGGGG
GAGTGGTGAAGTTGTGTCTGAGCCTTATGGTATGGTTGTGTGGTCAACAGGTATTGGTTC
ACGTCCTGTCATCAAGGACTTTATGCATCAGATTGGTCAGGTTAGGATTCATATCAAGTT
TTACTATAATCAAATCATTTGGCTCTTGTCTTGTCCACCTAACTAGATTGCTGAGTTTAT
CTGTTACAGGGTCAGAGACG
Pro Sequence
MSTRSFCKRAYSFFKAYPSASKLLLLSTCSGGGLLVYSDSSPSKRTLTAD
GQEIKEKKVVVLGSGWSGYSFLSHFNNPNYDVQVVSPRNFFLFTPLLPSV
TNGTVEARSIVEPIRGLMRKKGFEYTEAECVKIDPSNKKIHCKSKDSTSL
KGTTEFDIDYDILVIAVGAKPNTFNTPGVEEHAHFLKEAEDALKIRRSVI
NCFERASLPDLTEEERKKILHFVVVGGGPTGVEFSAELHDFLVEDVAKIY
PKVQEFTRITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTKNMVVGV
TADEISTKERGSGEVVSEPYGMVVWSTGIGSRPVIKDFMHQIGQGQRRVL
ATDEWLRVEGCDSVYALGDTATINQRRVMEDIAAIFGKADKGETGTLNKK
EFKGVVKDICQRYPQVELYLKKKKLRNIANLLKSANGDNTELSIETFKQA
LSEVDTQMKNLPATAQVASQQGKYLAKCFNKMEKCENKPEGPLRFRGEGR
HRFQPFRYRHFGSFAPLGGEQTAAELPGDWVSIGHSSQWLWYSVYASKLV
SWRTRSLVVSDWVRRFIFGRDSSSI
mRNA Sequence
ATGAGTACCCGTAGCttctgcaagagagCTTACAGCTTCTTCAAGGCTTACCCTTCTGCTTCCAAGCTTC
TTCTTCTCAGTACCTGCAGCGGTGGCGGTCTACTAGTGTATTCAGACTCGAGTCCATCGAAGCGTACATT
AACAGCAGATGGCCAAGAGATCAAGGAGAAGAAGGTGGTTGTTCTCGGGAGTGGATGGAGCGGCTACAGC
TTCTTGAGCCACTTCAACAACCCTAACTACGACGTTCAAGTTGTCTCTCCTCGTAACTTTTTCCTCTTCA
CCCCTCTCTTGCCAAGTGTCACCAACGGCACCGTTGAAGCTCGTAGCATTGTTGAACCCATCCGTGGCCT
TATGCGCAAGAAAGGATTTGAGTACACAGAGGCAGAGTGTGTCAAGATCGATCCATCCAACAAGAAGATC
CATTGCAAGTCAAAGGATAGCACAAGCCTCAAAGGCACAACAGAGTTTGACATTGACTACGACATTCTAG
TCATAGCTGTTGGAGCCAAGCCCAACACATTCAACACCCCTGGAGTTGAGGAACACGCCCATTTCCTAAA
GGAAGCAGAGGATGCTCTCAAGATTCGTCGCTCAGTCATAAACTGTTTCGAGAGAGCGTCTCTTCCTGAT
CTAACCGAAGAAGAGAGGAAAAAGATTCTTCACTTCGTTGTGGTTGGTGGAGGACCAACCGGTGTCGAGT
TCTCAGCTGAGCTACATGACTTCTTGGTCGAGGATGTGGCTAAGATATACCCAAAGGTGCAAGAGTTCAC
GAGAATCACTCTTCTTGAAGCAGGAGACCACATTCTCAACATGTTTGACAAGAGGATCACTGCCTTTGCT
GAGGAGAAGTTCCAGAGAGACGGTATTGATTTGAAGACAAAGAACATGGTTGTGGGAGTGACTGCTGACG
AGATATCTACAAAGGAAAGGGGGAGTGGTGAAGTTGTGTCTGAGCCTTATGGTATGGTTGTGTGGTCAAC
AGGTATTGGTTCACGTCCTGTCATCAAGGACTTTATGCATCAGATTGGTCAGGGTCAGAGACGTGTCTTG
GCAACTGATGAATGGCTTAGAGTGGAGGGATGTGATAGTGTTTATGCTTTAGGTGACACTGCAACCATCA
ACCAACGCAGAGTCATGGAAGATATAGCTGCAATATTCGGTAAAGCAGACAAGGGAGAGACAGGAACACT
GAACAAGAAAGAGTTCAAAGGTGTGGTGAAAGACATTTGCCAGAGGTACCCTCAAGTGGAGCTTTACTTG
AAGAAGAAGAAACTTAGAAACATTGCAAACTTGCTCAAGAGTGCGAATGGCGATAACACAGAGCTCAGCA
TCGAAACGTTTAAGCAAGCTCTCTCAGAAGTTGATACACAAATGAAAAATCTTCCAGCTACTGCCCAGGT
TGCATCACAACAAGGGAAGTACCTTGCTAAGTGCTTCAACAAAATGGAAAAATGTGAGAATAAGCCAGAG
GGACCATTGAGGTTCAGAGGAGAAGGTCGACACCGGTTCCAGCCGTTTAGGTACAGACATTTCGGATCGT
TTGCTCCGCTTGGAGGGGAGCAGACAGCAGCTGAACTGCCTGGAGATTGGGTTTCCATTGGTCACAGCAG
CCAATGGCTGTGGTACTCTGTTTACGCCAGCAAGCTGGTGAGCTGGCGCACAAGGTCGCTTGTAGTCTCT
GACTGGGTTCGACGCTTTATCTTTGGTCGTGACTCCAGCAGCATCTAA