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Detail for ZS11_C02G13990.t1

Genome:
ZS11: ZS11_C02G13990.t1
ZS11_v0: BnaC02T0124900ZS
WE: WE_A02G11550.t1
WE_v0: BnaC02T0118300WE
Darmor: C02p12200.1_BnaDAR
BH: BnaA02T112600BH
Quinta: BnaC02T0078200QU
ZS2: BnaC02T122400ZS2
SW: BnaA02T118000SW
Express61: C02p011420.1_BnaEXP
Xiaoyun: BnaC02G0120700XY
P202: BnaC03G075340P202.1
BL: BnaA02T112600BH
TA: BnaC02T125400TA
Da-Ae: Not available
RB: BnaA02T117000RB
No2127: BnaC02T0080100NO
P130: BnaC02G012750P130.1
Length: 499
KOG ID: KOG1284
KOG E-value: Not available
KOG Score: 908.0
KOG Annotation: Coenzyme transport and metabolism
Biological Process: GO:0009231(riboflavin biosynthetic process)
Cellular Component: -
Molecular Function: GO:0003935(GTP cyclohydrolase II activity),GO:0008686(3,4-dihydroxy-2-butanone-4-phosphate synthase activity)
KEGG Ortholog: K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
NR Protein: XP_022572781.1
NR E-value: 6.700000e-279
NR Score: 964.5
NR Annotation: XP_022572781.1 monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1 [Brassica napus]
SwissProt Protein: Q9FN89|RIBA3_ARATH
SwissProt E-value: Not available
SwissProt Score: 908.0
SwissProt Annotation: Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA3 PE=1 SV=1
CDS Sequence (1521 bp)
ATGGATTCTGCTTTATCTCCTCGCATTCTTTTCGCACACAGCTTCATTAACTCAAGGTCGCCTAGGTTTG
CAGCTACTAGTACTACTTGCTGGAGATTAGTTAATGGTTCATCTTGGGAGACTAAGGCTATTGGGAACAG
TGATAGCAATGAAAGTCCACTCAGAGGAACAGATGCGTCTTTCTTTGATCATGTTGACGCGGAACTCACG
CCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAGATTGTCCCACTCAAGGTTACTCCT
CTATCGAACTCGCTCTTCAATCCCTACGCCAAGGGAAGTTTGTGATCGTTGTTGACGATGAGAACGGCGA
TGTTGAAGGAAACCTGATCATGGCGGCTACTCTAACGAGTCCAAAAGACATTGCCTTTCTGATCAAGAAT
GGTTCTGGTATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTCAC
CTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCACCGTGGATGCAAAGTCAGGTACATC
AACAGGAGTCTCAGCTTCAGACAGGGCCATGACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGAT
GATTTCAGGAGACCAGGTCATGTGTTCCCTCTCAAGTACAGAGACGGTGGAGTTTTGAGGAGAGCCGGTC
ACACTGAAGCTTCGGTAGATCTAATGATATTAGCTGGTTTACATCCAGTATCAGTTCTTTCAGCTATTCT
TGATCAAGAAGATGGGTCTATGGCTTCACTACCGTATATGAAAAAGCTTGCTACAGGAAATGACATTCCC
ATTGTATCCTTGACTGATCTAATCAGATATCGAAGAAAGCGAGATAAGCTAGTGGAGAGAATCACCGTGT
CTCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCTACCGATCAAAGCTCGATGGAGCCGAAAA
TATAGCACTTGTTAAGGGAAACATCGGAAACGGTCAGGATATTCTGGTGCGGGTGCATTCAGAGTGCTTA
ACCGGAGATATTTTCGGTTCAGCACGGTGTGACTGCGGAAACCAATTAGAGTTAGCCATGCAGCTAATCG
AGAAAGAAGGAAGAGGCGTGGTTGTGTATCTTAGGGGACACGAAGGAAGAGGCATTGGTCTTGGTCACAA
GCTTAGAGCTTATAACTTGCAAGACGAAGGACACGACACTGTTCAGGCCAATCTTGAACTTGGTCTATCT
ATTGATGCTCGTGAATATGGTATTGGTGCTCAGATGCTTCGGGATATAGGAGTGAGAACAATGAGGCTGA
TGACGAATAATCCAGCGAAGTTCACAGGACTGAAAGGGTACGGACTGGCAGTAGTTGGGCGTGTGCCGGT
GGTGACACCAATCACCAATGAGAACAGAAGATACATGGAGACCAAACGCAAGAAGATGGGTCACATTTAT
ATCTCTGACATCGATCAGCCTTTGGTTTGA
Upstream Sequence
AAACAATCTAAAGGAGGAGACGTGAAGCAGCGAATCTATCGTACCAAGATATATACTTTCATGTCCTTAT
CCTCTGCGTTATTCGATCCTGTAGATGGATTCTGCTTTATCTCCTCGCATTCTTTTCGCACACAGCTTCA
TTAACTCAAGGTCGCCTAGGTTTGCAGCTACTAGTACTACTTGCTGGAGATTAGTTAATGGTTCATCTTG
GGAGACTAAGGCTATTGGGAACAGTGATAGCAATGAAAGTCCACTCAGAGGAACAGATGCGTCTTTCTTT
GATCATGTTGACGCGGAACTCACGCCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAG
ATTGTCCCACTCAAGGTTACTCCTCTATCGAACTCGCTCTTCAATCCCTACGCCAAGGGAAGTTTGTGAT
CGTTGTTGACGATGAGAACGGCGATGTTGAAGGAAACCTGATCATGGCGGCTACTCTAACGAGTCCAAAA
GACATTGCCTTTCTGATCAAGAATGGTTCTGGTATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAA
GATTAAACCTTACACTCATGTCACCTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCAC
CGTGGATGCAAAGTCAGGTACATCAACAGGAGTCTCAGCTTCAGACAGGGCCATGACGGTTCTTACACTT
GCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGTCATGTGTTCCCTCTCAAGTACAGAGACG
GTGGAGTTTTGAGGAGAGCCGGTCACACTGAAGCTTCGGTAGATCTAATGATATTAGCTGGTTTACATCC
AGTATCAGTTCTTTCAGCTATTCTTGATCAAGAAGATGGGTCTATGGCTTCACTACCGTATATGAAAAAG
CTTGCTACAGGAAATGACATTCCCATTGTATCCTTGACTGATCTAATCAGATATCGAAGAAAGCGAGATA
AGCTAGTGGAGAGAATCACCGTGTCTCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCTACCG
ATCAAAGCTCGATGGAGCCGAAAATATAGCACTTGTTAAGGGAAACATCGGAAACGGTCAGGATATTCTG
GTGCGGGTGCATTCAGAGTGCTTAACCGGAGATATTTTCGGTTCAGCACGGTGTGACTGCGGAAACCAAT
TAGAGTTAGCCATGCAGCTAATCGAGAAAGAAGGAAGAGGCGTGGTTGTGTATCTTAGGGGACACGAAGG
AAGAGGCATTGGTCTTGGTCACAAGCTTAGAGCTTATAACTTGCAAGACGAAGGACACGACACTGTTCAG
GCCAATCTTGAACTTGGTCTATCTATTGATGCTCGTGAATATGGTATTGGTGCTCAGATGCTTCGGGATA
TAGGAGTGAGAACAATGAGGCTGATGACGAATAATCCAGCGAAGTTCACAGGACTGAAAGGGTACGGACT
GGCAGTAGTTGGGCGTGTGCCGGTGGTGACACCAATCACCAATGAGAACAGAAGATACATGGAGACCAAA
CGCAAGAAGATGGGTCACATTTATATCTCTGACATCGATCAGCCTTTGGTTTGACCACTAGCGTTTGATA
GAAACAAAAAGACTTTAATTTTGTTAATCAATTTAATCACACTGCCAGAGGAAAGGCCTCTTTTATACAC
Downstream Sequence
GGTTTGAATGATGATAACTCTCTCCCTCTTTGTTATGTGGTTTATCTTGTGTTGTCTCCT
TGAAAACACTGGCTCTCTTACTTGTACAGGTCGCCTAGGTTTGCAGCTACTAGTACTACT
TGCTGGAGATTAGTTAATGGTTCATCTTGGGAGACTAAGGCTATTGGGAACAGTGATAGC
AATGAAAGTCCACTCAGAGGAACAGATGCGTCTTTCTTTGATCATGTTGACGCGGAACTC
ACGCCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAGATTGTCCCACT
CAAGGTTACTCCTCTATCGAACTCGCTCTTCAATCCCTACGCCAAGGGAAGGTTTGTTCT
TGATGAAGACCCCATTGGTTTATAAGTTGTGTAGACTCGGTCTTACCACGTTTCTTTCTT
TCTTATCAGTTTGTGATCGTTGTTGACGATGAGAACGGCGATGTTGAAGGAAACCTGATC
ATGGCGGCTACTCTAACGAGTCCAAAAGACATTGCCTTTCTGATCAAGAATGGTTCTGGT
ATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTCA
CCTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCACCGTGGTATAgttt
attaaaactttaatattttttccacaatttgaaagttatctatGTATATAACTTTTAAAA
AATTTAGGGGCAAATTAAAGTCCAATGTTTCATTTTTTAACTGTGTCCGGACCCGGGCCA
GTTTTGCAAAAAATAAATATGATATGATTCTCAAAAGTGTTTCAGCTCTTATATTGTTGT
TGGTTACAGGATGCAAAGTCAGGTACATCAACAGGAGTCTCAGCTTCAGACAGGGCCATG
ACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGTCAT
GTGTTCCCTCTCAAGTACAGAGACGGTGGAGTTTTGAGGAGAGCCGGTCACACTGAAGCT
TCGGTAGATCTAATGATATTAGCTGGTTTACATCCAGTATCAGTTCTTTCAGCTATTCTT
GATCAAGAAGATGGGTCTATGGCTTCACTACCGTATATGAAAAAGCTTGCTACAGGAAAT
GACATTCCCATTGTATCCTTGACTGATCTAATCAGGTAAGTAAATAAGAATGAAAATGTA
TTTAGAAGATTGATAACTTTGGTTGGATTGACTGATAGGGTTAGATAGGACTCTGATACC
ATATTAAGTTAGACGGACTTCTAACATAAAACCAATGATAAGTAAATTGGTTCATCTATA
TTATATATTACTTATGCTAACTTCTAACTTTTGATGTGAGAGACTTTGTCTCTAATAAAT
GTAATATAATCGTAGATATCGAAGAAAGCGAGATAAGCTAGTGGAGAGAATCACCGTGTC
TCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCTACCGATCAAAGCTCGATGG
AGCCGAAAATATAGCACTTGTTAAGGTACATCAAACACCACTTGCTTTAGATCAAAATCT
TGATCAGTTTTGGTTAAGACCAGTCTTGTTTTGTTTCTGTCTGAACCATAACCAGGGAAA
CATCGGAAACGGTCAGGATATTCTGGTGCGGGTGCATTCAGAGTGCTTAACCGGAGATAT
TTTCGGTTCAGCACGGTGTGACTGCGGAAACCAATTAGAGTTAGCCATGCAGCTAATCGA
GAAAGAAGGAAGAGGCGTGGTTGTGTATCTTAGGGGACACGAAGGAAGAGGCATTGGTCT
TGGTCACAAGCTTAGAGCTTATAACTTGCAAGACGAAGGACACGACACTGTTCAGGCCAA
TCTTGAACTTGGTCTATCTATTGATGCTCGTGAATATGGTATTGGTGCTCAGGTCAGCCA
TAGAATATTCAGTTTTGATTTTAATTTTTTTTGTTTAGATAGTTTGGTTATGTAGTTAGA
AAAAAAATAATTAGAACCAA
Pro Sequence
MDSALSPRILFAHSFINSRSPRFAATSTTCWRLVNGSSWETKAIGNSDSN
ESPLRGTDASFFDHVDAELTPETVDFFVSDAEGDPDCPTQGYSSIELALQ
SLRQGKFVIVVDDENGDVEGNLIMAATLTSPKDIAFLIKNGSGIVSVGMK
QQDLERLNLTLMSPEMEDEDSSAPTFTITVDAKSGTSTGVSASDRAMTVL
TLASLEAKPDDFRRPGHVFPLKYRDGGVLRRAGHTEASVDLMILAGLHPV
SVLSAILDQEDGSMASLPYMKKLATGNDIPIVSLTDLIRYRRKRDKLVER
ITVSRLPTKWGLFQAYCYRSKLDGAENIALVKGNIGNGQDILVRVHSECL
TGDIFGSARCDCGNQLELAMQLIEKEGRGVVVYLRGHEGRGIGLGHKLRA
YNLQDEGHDTVQANLELGLSIDAREYGIGAQMLRDIGVRTMRLMTNNPAK
FTGLKGYGLAVVGRVPVVTPITNENRRYMETKRKKMGHIYISDIDQPLV
mRNA Sequence
AAACAATCTAAAGGAGGAGACGTGAAGCAGCGAATCTATCGTACCAAGATATATACTTTCATGTCCTTAT
CCTCTGCGTTATTCGATCCTGTAGATGGATTCTGCTTTATCTCCTCGCATTCTTTTCGCACACAGCTTCA
TTAACTCAAGGTCGCCTAGGTTTGCAGCTACTAGTACTACTTGCTGGAGATTAGTTAATGGTTCATCTTG
GGAGACTAAGGCTATTGGGAACAGTGATAGCAATGAAAGTCCACTCAGAGGAACAGATGCGTCTTTCTTT
GATCATGTTGACGCGGAACTCACGCCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAG
ATTGTCCCACTCAAGGTTACTCCTCTATCGAACTCGCTCTTCAATCCCTACGCCAAGGGAAGTTTGTGAT
CGTTGTTGACGATGAGAACGGCGATGTTGAAGGAAACCTGATCATGGCGGCTACTCTAACGAGTCCAAAA
GACATTGCCTTTCTGATCAAGAATGGTTCTGGTATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAA
GATTAAACCTTACACTCATGTCACCTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCAC
CGTGGATGCAAAGTCAGGTACATCAACAGGAGTCTCAGCTTCAGACAGGGCCATGACGGTTCTTACACTT
GCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGTCATGTGTTCCCTCTCAAGTACAGAGACG
GTGGAGTTTTGAGGAGAGCCGGTCACACTGAAGCTTCGGTAGATCTAATGATATTAGCTGGTTTACATCC
AGTATCAGTTCTTTCAGCTATTCTTGATCAAGAAGATGGGTCTATGGCTTCACTACCGTATATGAAAAAG
CTTGCTACAGGAAATGACATTCCCATTGTATCCTTGACTGATCTAATCAGATATCGAAGAAAGCGAGATA
AGCTAGTGGAGAGAATCACCGTGTCTCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCTACCG
ATCAAAGCTCGATGGAGCCGAAAATATAGCACTTGTTAAGGGAAACATCGGAAACGGTCAGGATATTCTG
GTGCGGGTGCATTCAGAGTGCTTAACCGGAGATATTTTCGGTTCAGCACGGTGTGACTGCGGAAACCAAT
TAGAGTTAGCCATGCAGCTAATCGAGAAAGAAGGAAGAGGCGTGGTTGTGTATCTTAGGGGACACGAAGG
AAGAGGCATTGGTCTTGGTCACAAGCTTAGAGCTTATAACTTGCAAGACGAAGGACACGACACTGTTCAG
GCCAATCTTGAACTTGGTCTATCTATTGATGCTCGTGAATATGGTATTGGTGCTCAGATGCTTCGGGATA
TAGGAGTGAGAACAATGAGGCTGATGACGAATAATCCAGCGAAGTTCACAGGACTGAAAGGGTACGGACT
GGCAGTAGTTGGGCGTGTGCCGGTGGTGACACCAATCACCAATGAGAACAGAAGATACATGGAGACCAAA
CGCAAGAAGATGGGTCACATTTATATCTCTGACATCGATCAGCCTTTGGTTTGACCACTAGCGTTTGATA
GAAACAAAAAGACTTTAATTTTGTTAATCAATTTAATCACACTGCCAGAGGAAAGGCCTCTTTTATACAC