SEARCH

DETAIL

Detail for ZS11_C02G29740.t1

Genome:
ZS11: ZS11_C02G29740.t1
ZS11_v0: BnaC02T0252800ZS
WE: WE_C02G33260.t1
WE_v0: BnaC02T0243100WE
Darmor: C02p28200.1_BnaDAR
BH: BnaA01T182500BH
Quinta: BnaC02T0204300QU
ZS2: BnaA01T178000ZS2
SW: BnaA01T182700SW
Express61: C02p024870.1_BnaEXP
Xiaoyun: BnaC02G0251200XY
P202: BnaC02G009650P202.1
BL: BnaA01T182500BH
TA: BnaA01T178300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g16770D
RB: BnaA01T182400RB
No2127: BnaC02T0205700NO.1
P130: BnaC02G027340P130.1
Length: 72
KOG ID: KOG3135
KOG E-value: 4.150000e-38
KOG Score: 126.0
KOG Annotation: General function prediction only
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
NR Protein: CDY09483.1
NR E-value: 2.200000e-34
NR Score: 149.4
NR Annotation: CDY09483.1 BnaC02g20250D [Brassica napus]
SwissProt Protein: Q6NQE2|FQRL1_ARATH
SwissProt E-value: 8.520000e-38
SwissProt Score: 127.0
SwissProt Annotation: Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27270 PE=1 SV=1
CDS Sequence (222 bp)
ATGAGTACACCGCCAAAGAGTGATGCTCCTCTTATCACCCCCAATGACCTTGCCGAGGCTGATGGCTTTA
TCTTTTGCTTTGGTATGATGGCTGCTCAGTTCAAGGTATTCTTAGATAAAACTGGTGGTCTCTGGAGGAC
TTTACAACTTGCTGGTAAGCCAGCCAGAATCTTCTACAGCACCGGGTCTCAAGGTGGTGGTCAAGAAACC
ACCGCATAA
Upstream Sequence
ATGAGTACACCGCCAAAGAGTGATGCTCCTCTTATCACCCCCAATGACCTTGCCGAGGCTGATGGCTTTA
TCTTTTGCTTTGGTATGATGGCTGCTCAGTTCAAGGTATTCTTAGATAAAACTGGTGGTCTCTGGAGGAC
TTTACAACTTGCTGGTAAGCCAGCCAGAATCTTCTACAGCACCGGGTCTCAAGGTGGTGGTCAAGAAACC
ACCGCATAA
Downstream Sequence
AGTTTCTTTTCTCAATCCAAAATAACACCTCATCAAAGACACTTGCTTCGGTTTTTATGT
TTTGGAGTGTTACTTGTGTTGTCATTGATTTCTAACACGTTTTTTTTTATAATCTTTGTA
AGCAGGATTTATAAACTATCGAACTAATTCTATTTTTATAAATCTTGATCTCATGCCAAT
TAAGCAAACATAAGAATTTTTTTCTCATATTTTTCTAAACGTAAAAATCAAGATAAATGT
TTCCAACTACATGTTTGGTTCCTAATGACAATTATAGCATATGGTGAGTTAGTTTTTCTT
CACTTTTAAGCTTTAACTCGTTTTTAGTTATAGGATGATGAACAAAATACAAATCCATAA
CGGTCAAAGTTTAACTTATATGTCTGAGCAAGATAATAACACTATCATACCAATTCTACT
AACCCTTTTGTTGAGCCCAAGAAAATAATTCTTTTTTTTTTTGTCAACAAGCCCAAAAAT
AACTATTAAAAATATAgttatcttaatcaaaatcaagattgaaaattccatatccatatt
cagatctatgcgcttgaattgaattcaaaattttatcttactatttgaatcaaacaaaac
cAAAATACCTAAACTTAAACCAGACTCAAATTTATAAATaATCAAACGGTTCATATATTT
CTTGAACCGAAAACCAAAAACCacaaccaaaccgaaaacaaaagtacaatctagaagcga
accaaaaccAAACGCACATGCCAAATATATTAGTTAACAAATCAACATGTTGATAAATTT
GTCAACAAAAAATAATCCCGCGCTTTCTGTCCTAGTATtatttataaatttcaatccAGA
AAAAAATTAGTTGTAAATCCTTATTTACTAAAGTATACAAAAAAATTTCTAGATTAAATT
TTGCCCCACAAATTTTAAAGCTATATTTCACTCAATCATCTTAAACTTTTCATTTAATCG
ATTTTTTCTTTTATTGCGTTGAACCGAACCGACTCTGATTTTCTATTCTGGTCCTGATTA
CTCGTTAGACACACGGGAGAAAATAAAACACGTACGTTTTAGAAAAAGCACCAAAACGGA
ATTTTCCCAAAAAAACCTAAAACCCTAACTAACCTATTTAAACACCCCTCGGCTCAACAA
TCACATCCATTCTCTGTCTTGGTCACAATCTTCTCTGCTTTCTCGCATCGCCAAAACCAA
AAAGTGCTTCTCCCTTCCACGATTTCGATCTTAATCTTACCGTGGAACCGTTTGTGAATG
GTGGAAACGAATCCGATTGGTGATAAGTTTACTTTCCCCCTTCACATCCAAAGAGCAAGC
TTCCTCCTCCCCCTCTCTTCTTCCTCTGCTTTCTCTTTCGGTTCCTGCAAAGAAGGCTGG
TACTTTCGCTGCCTCGGCCTCGACCCGTGAATCTCAATCTCATCAACAAACCCTAGTTTC
ATCTCGTAAATTTAGTGTTTTATTTCTGTTGAAATTTTTTTCGAAGATGTTGCTCTACAA
CAAGCAGAAGAAGAACGCTAAGGGAAACAGAATCCTTATCAGCGTTACCGTTCTCGGTAG
CGCCGGTCCGATCCGGTTCCTTGCGTACGAAGAAGATCTCGTAGCTTCGGTTATCGACAC
TGCTCTCAAGTGCTACGCTCGTGAAGGTCGCCTTCCTCTTCTCGGATCCGACTTCAATGA
TTTCATTCTCTATTGTCCCATGGTTGGACCTGAATGTAAGTAACCAATTAATTTCCTAAT
CCTCATTCGAATTGATTTTTTGTAACCTAATTTGTTTACTAAACCGGTTTTTGGTTTTTT
TTTTGACAGCTATGAGCGCGTGGAAAGGTATTGGATCGCTTGGTGCAAGGAACTTTACTC
TGTGTAGGAAGCCAGAGGAGAAGAATAAGGTGGTCAAGGAAGGTGATGTTGCTAGAAAAG
GAGGAAGCTTCAAAGCTTGGATCAACAAGTCCTTCAGTCTCAGAGTCTCCACCCATTAAA
GATTCTTTCTTTTTCAGACC
Pro Sequence
MSTPPKSDAPLITPNDLAEADGFIFCFGMMAAQFKVFLDKTGGLWRTLQL
AGKPARIFYSTGSQGGGQETTA
mRNA Sequence
ATGAGTACACCGCCAAAGAGTGATGCTCCTCTTATCACCCCCAATGACCTTGCCGAGGCTGATGGCTTTA
TCTTTTGCTTTGGTATGATGGCTGCTCAGTTCAAGGTATTCTTAGATAAAACTGGTGGTCTCTGGAGGAC
TTTACAACTTGCTGGTAAGCCAGCCAGAATCTTCTACAGCACCGGGTCTCAAGGTGGTGGTCAAGAAACC
ACCGCATAA