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Detail for ZS11_C02G41160.t1

Genome:
ZS11: ZS11_C02G41160.t1
ZS11_v0: BnaC02T0344600ZS
WE: WE_C05G41570.t1
WE_v0: BnaC02T0332100WE
Darmor: C02p39270.1_BnaDAR
BH: BnaC02T222100BH
Quinta: BnaC02T0290200QU
ZS2: BnaC02T339900ZS2
SW: BnaA09T022100SW
Express61: C02p047570.1_BnaEXP
Xiaoyun: BnaC03G0323800XY
P202: BnaC02G019500P202.1
BL: BnaC02T222100BH
TA: BnaC02T347400TA
Da-Ae: Not available
RB: BnaC02T216800RB
No2127: BnaC02T0296100NO
P130: BnaC02G039180P130.1
Length: 341
KOG ID: KOG3196
KOG E-value: 7.300000e-84
KOG Score: 255.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2]
NR Protein: XP_022552286.1
NR E-value: 2.000000e-80
NR Score: 304.7
NR Annotation: XP_022552286.1 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like [Brassica napus]
SwissProt Protein: O22769|NDUV2_ARATH
SwissProt E-value: 2.260000e-83
SwissProt Score: 256.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02580 PE=1 SV=3
CDS Sequence (1040 bp)
ATGGAGCGCAAGACAATTGATTTGGATCAAGGATGGGACTATATGCAGACTGGAGATTTTTTTCTCCGAC
ACTTCCATCTCCGACACCTCCTTCTCCATCACCACCTTCGAAGGTCACGGCCGTATTCAATTCCTGACAC
CCCAACCCCATCTGGTCTTCCTATTTGTTGTCGTCGACGAACCCTAACCCCACACCACCGATTTAAGTCA
CCACCTCATTCAACTCCCAGAAACTTGAAGCCGTTGGCTTCATCTCCTGCCATTAGAATATATCCTCCGC
GCTTATACGAAGTTGAGAAAACATCAATTCACAACAAGAGTTATTTAAACGATCAAGAAGATGAAGATGT
ATTGTTTTCCGGTGTAGCCAGCGGAAGAGCTGGTGTATCATGCTCTCCTTTAGTGACTTATGCCGACTAT
AACCAAGAAAGAATAGAAAATCAGATTTGGATTATGAGGCCAAGAAAAATCCTGAAAAATGCGAAGCGTC
TTCTGGAGATTCGTCAAGTTTTCCGCCAACCACCCTCTCAGGTTCATGTATCCTCTCACTTTATATCAGG
TTGCAAAAGTTATGGAAGTTGCTCATATCCGTGTTTACGAGATTGCAACTTATTACTCAATGTTGGAAAG
TATCACCTGCTCGTTTGTGGCACAACACCTTGCATGATCTGTGGTTCACGAGATATCGAATCAGTTTTGC
TAGACCATTTGGGAGTCAAACGCGGTGAAGTCACAAAGGATGGCTTGTTCTCTGTTAGAGAGATGGAATG
CATGGGATGCTGTGTTAATGCGCCCATGATCACGGTGGAAGATTATTCCAATGGATCACAAGGATATACA
TACAACTATTTCGTATACGTTAGACCTGAGAAAGTTGTAGAGATCGTTGAAAAGCTAAGAAAAGGAGAAA
AGCCACCGCATGAAACTCAAGACCCGAAGAGGATCAAGTGCGGACCTGAAGGAGGAAACACGACACTGCT
CGGCGAGCCAAAGCCACTACAGTTCCGTGATCTGGATGCTTGCTAA
Upstream Sequence
ATGGAGCGCAAGACAATTGATTTGGATCAAGGATGGGACTATATGCAGACTGGAGATTTTTTTCTCCGAC
ACTTCCATCTCCGACACCTCCTTCTCCATCACCACCTTCGAAGGTCACGGCCGTATTCAATTCCTGACAC
CCCAACCCCATCTGGTCTTCCTATTTGTTGTCGTCGACGAACCCTAACCCCACACCACCGATTTAAGTCA
CCACCTCATTCAACTCCCAGAAACTTGAAGCCGTTGGCTTCATCTCCTGCCATTAGAATATATCCTCCGC
GCTTATACGAAGTTGAGAAAACATCAATTCACAACAAGAGTTATTTAAACGATCAAGAAGATGAAGATGT
ATTGTTTTCCGGTGTAGCCAGCGGAAGAGCTGGTGTATCATGCTCTCCTTTAGTGACTTATGCCGACTAT
AACCAAGAAAGAATAGAAAATCAGATTTGGATTATGAGGCCAAGAAAAATCCTGAAAAATGCGAAGCGTC
TTCTGGAGATTCGTCAAGTTTTCCGCCAACCACCCTCTCAGGTTCATGTATCCTCTCACTTTATATCAGG
TTGCAAAAGTTATGGAAGTTGCTCATATCCGTGTTTACGAGATTGCAACTTATTACTCAATGTTGGAAAG
TATCACCTGCTCGTTTGTGGCACAACACCTTGCATGATCTGTGGTTCACGAGATATCGAATCAGTTTTGC
TAGACCATTTGGGAGTCAAACGCGGTGAAGTCACAAAGGATGGCTTGTTCTCTGTTAGAGAGATGGAATG
CATGGGATGCTGTGTTAATGCGCCCATGATCACGGTGGAAGATTATTCCAATGGATCACAAGGATATACA
TACAACTATTTCGTATACGTTAGACCTGAGAAAGTTGTAGAGATCGTTGAAAAGCTAAGAAAAGGAGAAA
AGCCACCGCATGAAACTCAAGACCCGAAGAGGATCAAGTGCGGACCTGAAGGAGGAAACACGACACTGCT
CGGCGAGCCAAAGCCACTACAGTTCCGTGATCTGGATGCTTGCTAA
Downstream Sequence
GGTGCCACTAAGCTCAAACGGATTCTTGAAGGATTGCCCTAGCCGCATTTTGACTCTGAG
CAATACATGATGCTTTAATATGTATGTTCTTCCAACACTTGTTTATTTATTATGAGAAAT
TACTCAAAATGACTCAAATTATATATGTAATGACTAAAATAACTCTTATAATTTTGTATT
TACTAAAATAACTCATAAGGGAAACAAAAATACCAAAAAACCAGTCTAAGCCTCATTATT
CACAGTTTTGCCATTATATTTATTAATAGGAATAAATTTTTAATTGTGTAAAAGCAAAAA
AAAATAGAAAGTCGACTTCTCTTTCTCTTTCACAGCCGCAGGGGACGACGCCAAAGGAGA
TTTTTTTCTCCGACACTTCCATCTCCGACACCTCCTTCTCCATCACCACCTTCGAAGGTC
ACGGCCGTATTCAATTCCTGACACCCCAACCCCATCTGGTCTTCCTATTTGTTGTCGTCG
ACGAACCCTAACCCCACACCACCGATTTAAGTCACCACCTCATTCAACTCCCAGAAACTT
GAAGCCGTAAGTCACAAATCCATCCTAATCATGTTTGATATTCTTTGTTGTTAACATTAT
TTGATTGATTGCATTTTTAATTTTGAAAACCCTATTTCACAAATCCCCTTTTCCTCTGAA
GTTGAAATCCAAAAACTGTTTATTTGTAAAGTAGACTAAGCATTGAATTCATAGATTAGC
AATACGGTATTGGGTTTGTTGTTTATTGAAAACCCTTTGTTTCTATATAAGACAGCAATC
AGCAATGACTATTGACACTTTGTACTGACTGTAGCTGATTGTGTTCATTGTTTATTGCAG
GTTGGCTTCATCTCCTGCCATTAGAATATATCCTCCGCGCTTATACGAAGTTGAGAAAAC
ATCAATTCACAACAAGAGTTATTTAAACGATCAAGAAGATGAAGATGTATTGTTTTCCGG
TGTAGCCAGCGGAAGAGCTGGTGTATCATGCTCTCCTTTAGTGACTTATGCCGACTATAA
CCAAGAAAGAATAGAAAATCAGATTTGGATTATGAGGCCAAGGTTAAGACACATAGGATC
AAATTCTCAATTTTTCTCGTGTTGGTGAAACTGACTCAAGACAAGACAAGAGAAAGAGAC
TGAATCATGCTCAAGACGGGAAATGATCAAGAGTGTGCTGAGATGGGGATTGACTGATTT
GAGTTTTTTCTCTATTGTAGTTGTGGGGCTTGTAACACTGAAATTTTAGCATCTTGGAAT
GAGCGAAAGAAATCAAATACCTTGTTGTTCCCTAAAAGTTTATTGGCATTGTAAACAGTT
TAAATTGTTTATGTCATCCACATCCTCTTTTGAGCACACAGTGGGGTAGTAATAGATCAC
ATCTTCATTTCTTTTTTACACTAACAAAGAAAAAAAATGCAAGGTTTTTGGCTGAGCTGC
GATGCATTGTGATTTCCATCATTGTGAGTGGAAGGGATAATACGAGAAAGAAAAATTATT
CATTCTTTGTAGTTTTTAACTTAGAATAAAGAAGACTGATGCTTTTCATCTCTCACCACT
TGTAATAATAATTTCGTATTGTAAGAATGGATGAGGATCCATTGAATATGTTTTTATAAT
GTTTGTGATCCATGTTTCTCCAAGCAAAAAGATTGCAACAAGTGATTAAACCACCATGAC
AAATAACAACTTGATAAGGAAGAAAAACAAATGAAAGAAAAAAAGACAAATACCAAAAGT
TTACCTAATTCTGGATCTTAATTATCCTAACAATAAACCAGATTCAAAATTAATATACAA
CATGTCAAAATTCAACATTAAATTAAGTTCGGTTTACACAAACCCAAATTTCCGTCAATA
AATCTACCGTAACATAAATTAAAAAATCTGTCACCACATAAACAAAAAGTCTACCAACAA
TTTTAAATCGGATATAAAACTCTGCCGTAAGAAAATAAGTCGAACATAACAAATAAAGTC
TGTACATAAGAAAATAAATT
Pro Sequence
MERKTIDLDQGWDYMQTGDFFLRHFHLRHLLLHHHLRRSRPYSIPDTPTP
SGLPICCRRRTLTPHHRFKSPPHSTPRNLKPLASSPAIRIYPPRLYEVEK
TSIHNKSYLNDQEDEDVLFSGVASGRAGVSCSPLVTYADYNQERIENQIW
IMRPRKILKNAKRLLEIRQVFRQPPSQVHVSSHFISGCKSYGSCSYPCLR
DCNLLLNVGKYHLLVCGTTPCMICGSRDIESVLLDHLGVKRGEVTKDGLF
SVREMECMGCCVNAPMITVEDYSNGSQGYTYNYFVYVRPEKVVEIVEKLR
KGEKPPHETQDPKRIKCGPEGGNTTLLGEPKPLQFRDLDAC
mRNA Sequence
ATGGAGCGCAAGACAATTGATTTGGATCAAGGATGGGACTATATGCAGACTGGAGATTTTTTTCTCCGAC
ACTTCCATCTCCGACACCTCCTTCTCCATCACCACCTTCGAAGGTCACGGCCGTATTCAATTCCTGACAC
CCCAACCCCATCTGGTCTTCCTATTTGTTGTCGTCGACGAACCCTAACCCCACACCACCGATTTAAGTCA
CCACCTCATTCAACTCCCAGAAACTTGAAGCCGTTGGCTTCATCTCCTGCCATTAGAATATATCCTCCGC
GCTTATACGAAGTTGAGAAAACATCAATTCACAACAAGAGTTATTTAAACGATCAAGAAGATGAAGATGT
ATTGTTTTCCGGTGTAGCCAGCGGAAGAGCTGGTGTATCATGCTCTCCTTTAGTGACTTATGCCGACTAT
AACCAAGAAAGAATAGAAAATCAGATTTGGATTATGAGGCCAAGAAAAATCCTGAAAAATGCGAAGCGTC
TTCTGGAGATTCGTCAAGTTTTCCGCCAACCACCCTCTCAGGTTCATGTATCCTCTCACTTTATATCAGG
TTGCAAAAGTTATGGAAGTTGCTCATATCCGTGTTTACGAGATTGCAACTTATTACTCAATGTTGGAAAG
TATCACCTGCTCGTTTGTGGCACAACACCTTGCATGATCTGTGGTTCACGAGATATCGAATCAGTTTTGC
TAGACCATTTGGGAGTCAAACGCGGTGAAGTCACAAAGGATGGCTTGTTCTCTGTTAGAGAGATGGAATG
CATGGGATGCTGTGTTAATGCGCCCATGATCACGGTGGAAGATTATTCCAATGGATCACAAGGATATACA
TACAACTATTTCGTATACGTTAGACCTGAGAAAGTTGTAGAGATCGTTGAAAAGCTAAGAAAAGGAGAAA
AGCCACCGCATGAAACTCAAGACCCGAAGAGGATCAAGTGCGGACCTGAAGGAGGAAACACGACACTGCT
CGGCGAGCCAAAGCCACTACAGTTCCGTGATCTGGATGCTTGCTAA