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Detail for ZS11_C02G52130.t1

Genome:
ZS11: ZS11_C02G52130.t1
ZS11_v0: BnaC02T0427800ZS
WE: WE_C02G56680.t1
WE_v0: BnaC02T0411200WE
Darmor: C02p49750.1_BnaDAR
BH: BnaC02T302300BH
Quinta: BnaC02T0403000QU
ZS2: BnaC02T422100ZS2
SW: BnaA02T354600SW
Express61: C02p031700.1_BnaEXP
Xiaoyun: BnaC02G0433600XY
P202: BnaC02G032670P202.1
BL: BnaC02T302300BH
TA: BnaC02T433000TA
Da-Ae: Not available
RB: BnaC02T310300RB
No2127: BnaC02T0379000NO
P130: BnaC02G054590P130.1
Length: 166
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009773(photosynthetic electron transport in photosystem I)
Cellular Component: GO:0009535(chloroplast thylakoid membrane),GO:0010598(NAD(P)H dehydrogenase complex (plastoquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013670179.1
NR E-value: 1.100000e-81
NR Score: 307.8
NR Annotation: XP_013670179.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Brassica napus]
SwissProt Protein: Q9ZVE7|CRR3_ARATH
SwissProt E-value: 1.280000e-76
SwissProt Score: 229.0
SwissProt Annotation: Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR3 PE=2 SV=1
CDS Sequence (508 bp)
ATGGTGGTCTTATCCAGCAGCATCTTCTCCATGAGCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACG
ACTCTCCATCTTCCCTTCCTTCGAAACCTACCAAGAAACCCACAAGAATCAGCCTGAAAACAGGAAATCA
AAATCAGCAATTATCACGGAAGCAACGGCGAGAGAAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTT
GGCGCTGGATCATATCGTGATTCTGAAGGGGAAATGGATATGAATACAGTATTCGATGAGCTTCTTCTGG
GTCATGCTAATAAGTTCGAAGGAAAGCTGGAGAAGAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCG
AACAGAGTCTAAGCTTCGTTCCTCCGGGAAACCAGTTTTGATGTTTACAATGCAATGGATACTTCCTATA
TGGATTGTGTCTCTGCTTTTGGCTTGTGGAATTATCAAACTTCCCTTTACCCTCCCTTTACTTGATGACT
TGATCATGTGA
Upstream Sequence
CCAAGCTGCGGAAACCACACAAGACAAGAGAAGGCAATGGTGGTCTTATCCAGCAGCATCTTCTCCATGA
GCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACGACTCTCCATCTTCCCTTCCTTCGAAACCTACCAA
GAAACCCACAAGAATCAGCCTGAAAACAGGAAATCAAAATCAGCAATTATCACGGAAGCAACGGCGAGAG
AAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTTGGCGCTGGATCATATCGTGATTCTGAAGGGGAAA
TGGATATGAATACAGTATTCGATGAGCTTCTTCTGGGTCATGCTAATAAGTTCGAAGGAAAGCTGGAGAA
GAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCGAACAGAGTCTAAGCTTCGTTCCTCCGGGAAACCA
GTTTTGATGTTTACAATGCAATGGATACTTCCTATATGGATTGTGTCTCTGCTTTTGGCTTGTGGAATTA
TCAAACTTCCCTTTACCCTCCCTTTACTTGATGACTTGATCATGTGATTGTACCTTATACACACACCACA
TATTTACCATGATCACAATCACTTTTGTGTTTAGCCACCCATAATAATCTCAAAAGAAAGTGATTTCTGT
GAACATTTTTATTAATCATAGTTAGAAAAATGTATACATAAATCCTATCCCACAAGAGAAATGTCAAGAG
GTATAATATTGCAGTTCTCTGTAAAAAGTGTTTACTAAATGAATTGTATTTTACTATTACACCATCTCAT
TTTGTCTAATGTTCCACATGTCATCGGTTT
Downstream Sequence
GTACGCATAAACTGCAAACTGTATAACATTTGATTGTATGGATACTTGAAGTTTATTTGC
TTTGTTTTGTTTTAAAAGGGAAATGGATATGAATACAGTATTCGATGAGCTTCTTCTGGG
TCATGCTAATAAGTTCGAAGGAAAGCTGGAGAAGAAGCTACGAGAGGTTGGCGAAATGTT
TGTAGACCGAACAGAGTCTAAGCTTCGTTCCTCCGGTAAGTTTAGTTTTTCTTTCTTGAA
ATGGTATTGGTAATAAAAGCTCTCTTTCTTCTTGGCATAATGGGATGATTGATAATGTTG
CAGGGAAACCAGTTTTGATGTTTACAATGCAATGGATACTTCCTATATGGATTGTGTCTC
TGCTTTTGGCTTGTGGAATTATCAAACTTCCCTTTACCCTCCCTTTACTTGATGACTTGA
TCATGTGATTGTACCTTATACACACACCACATATTTACCATGATCACAATCACTTTTGTG
TTTAGCCACCCATAATAATCTCAAAAGAAAGTGATTTCTGTGAACATTTTTATTAATCAT
AGTTAGAAAAATGTATACATAAATCCTATCCCACAAGAGAAATGTCAAGAGGTATAATAT
TGCAGTTCTCTGTAAAAAGTGTTTACTAAATGAATTGTATTTTACTATTACACCATCTCA
TTTTGTCTAATGTTCCACATGTCATCGGTTTACAGTTATATTTACACAAAGCGAAATCTA
TACCAAGTTTGGGTGTTTGTAGCAGCAAAACACAATCGACACTTGTACGCAAAATCATCC
TGTTACAGTGAAAAAAAAGAATAGCCCCTCACTCTCTATACTAATCTTGACGGTGATTCC
AAATTTAGATATAAAGCTGGCCATTTTAGGTAGTTAGTGGTAGGTGGCCAACATTTCTAA
CTCTACTTTTGCTTTCAGTTGTGTATATTCTACCGGTTAACCCGTTTCTATAATCTCCAA
AAGCTTAAGGCATCTATAATGGAATAACAAACACCAAATTTGGTGTAATTTCATCTCTAG
CGAGACACTAAAATTTACACTATCCCACCAACTTACACTAAAAGTGACATTATCATACCA
AATTTGGTGTAGTGTGAATAGTATTACGAGAAAATATATACGAGAAGACCAGATTGTTTT
CATAATCAGAATGGTAACTTGTCTATTGAAATGTTAACCCTTTGAAACTACCTTTAAACC
TCGATTATACTATGAGGATTTGATACCAACAGATATAAAAAATACGGACAATAGAAGAAA
CAACCAACATAAACATTGTGCCCAGCATGGCGGTGGCGGTTGCGGTGATTCCAGCTGCTG
AGGCTGTGGTGGAAACACGTGGCCAAGTCCATGTGTGCAACTTCGAGCATTGGCTCCACA
TCGGTAGCAAAACTTATGTCCACATCTGCCACGAAAATGCAATGTTATATATTCTTATCA
AGATTAAAACATATATATAACCGAAATTGGAAAGGAAATGATGTGATTAATAGATATGAT
ACCTGCAAACTACGAGGACGCATCCTTTAGAAAGTTCAATCATGTGTTGGCATTTTCCGC
ACTGACGCCACAGTTTCTGATTTGCTAGGGCATGTAGCTTTAGCTCGCTTTCTCTTAAAT
TTGGATGCATTATCTTGAAATCGTCGCATGACAAGTTATCATGCCATGGAAACTTGCAGT
TAGTGCAGAAGGGCTCACCGCATTTTTCGCAGCATCTCCTAACTGCACTCTCTTTATTCA
GTTTTGAAAGCTCGGTTACGCGCATTAAAGCTGAGCACTTCGGGTTAGGGCAATAAACTC
TTTCCTCAAAAGGAATCGAGTTCTCTCTGATCCTTTGTCGCCAAATCTCTCTTAATTTAG
GTGTCAAAAGATCGGCACATCTATTAAAATTCAGTTCAGACTTGCAACGAAACTGAGGAC
ACGTCATCACACTTCCTTCGAGTAGCCTTACCTCTATGTGTCGTTTCACACACTCGGAAC
AAAACCGATGACCACATTTA
Pro Sequence
MVVLSSSIFSMSRASTAMASLTNDSPSSLPSKPTKKPTRISLKTGNQNQQ
LSRKQRREKKPSIAQIERAFGAGSYRDSEGEMDMNTVFDELLLGHANKFE
GKLEKKLREVGEMFVDRTESKLRSSGKPVLMFTMQWILPIWIVSLLLACG
IIKLPFTLPLLDDLIM
mRNA Sequence
CCAAGCTGCGGAAACCACACAAGACAAGAGAAGGCAATGGTGGTCTTATCCAGCAGCATCTTCTCCATGA
GCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACGACTCTCCATCTTCCCTTCCTTCGAAACCTACCAA
GAAACCCACAAGAATCAGCCTGAAAACAGGAAATCAAAATCAGCAATTATCACGGAAGCAACGGCGAGAG
AAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTTGGCGCTGGATCATATCGTGATTCTGAAGGGGAAA
TGGATATGAATACAGTATTCGATGAGCTTCTTCTGGGTCATGCTAATAAGTTCGAAGGAAAGCTGGAGAA
GAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCGAACAGAGTCTAAGCTTCGTTCCTCCGGGAAACCA
GTTTTGATGTTTACAATGCAATGGATACTTCCTATATGGATTGTGTCTCTGCTTTTGGCTTGTGGAATTA
TCAAACTTCCCTTTACCCTCCCTTTACTTGATGACTTGATCATGTGATTGTACCTTATACACACACCACA
TATTTACCATGATCACAATCACTTTTGTGTTTAGCCACCCATAATAATCTCAAAAGAAAGTGATTTCTGT
GAACATTTTTATTAATCATAGTTAGAAAAATGTATACATAAATCCTATCCCACAAGAGAAATGTCAAGAG
GTATAATATTGCAGTTCTCTGTAAAAAGTGTTTACTAAATGAATTGTATTTTACTATTACACCATCTCAT
TTTGTCTAATGTTCCACATGTCATCGGTTT