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Detail for ZS11_A02G11270.t1

Genome:
ZS11: ZS11_A02G11270.t1
ZS11_v0: BnaA02T0103000ZS
WE: WE_A02G11550.t1
WE_v0: BnaA02T0105000WE
Darmor: A02p06900.1_BnaDAR
BH: BnaA02T112600BH
Quinta: BnaA02T0103000QU
ZS2: BnaA02T108900ZS2
SW: BnaA02T118000SW
Express61: A02p010210.1_BnaEXP
Xiaoyun: BnaC02G0120700XY
P202: BnaC09G010320P202.1
BL: BnaA02T112600BH
TA: BnaC02T125400TA
Da-Ae: Not available
RB: BnaA02T117000RB
No2127: BnaA02T0104400NO
P130: BnaA02G009810P130.1
Length: 499
KOG ID: KOG1284
KOG E-value: Not available
KOG Score: 907.0
KOG Annotation: Coenzyme transport and metabolism
Biological Process: GO:0009231(riboflavin biosynthetic process)
Cellular Component: -
Molecular Function: GO:0003935(GTP cyclohydrolase II activity),GO:0008686(3,4-dihydroxy-2-butanone-4-phosphate synthase activity)
KEGG Ortholog: K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
NR Protein: RID73955.1
NR E-value: 6.100000e-280
NR Score: 968.0
NR Annotation: RID73955.1 hypothetical protein BRARA_B01074 [Brassica rapa]
SwissProt Protein: Q9FN89|RIBA3_ARATH
SwissProt E-value: Not available
SwissProt Score: 907.0
SwissProt Annotation: Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA3 PE=1 SV=1
CDS Sequence (1521 bp)
ATGGATTCTGCTTTATCTCCTCGCATTCTTTTCCCACACAGCTTCGTTAACTCAAGGTCGCCTAGGTTTG
GAGCTACGAGTACTACTTGCTGGAGATTAGTTAATACTTTATCTTGGGAGGCCAAGGCTATTGGGAACAG
TGATCGCAATGAAAGTCCTCTCAAAGGAACAGATGGTTCTTTCTTTGATCATGTTGACGCGGAACTCACG
CCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAGATTGTCCTACTCAAGGCTACTCCT
CTATCGAACTCGCTCTTCAATCTCTACGCCAAGGGAAGTTTTTGATCGTTGTTGACGATGAGAACGGGGA
TGTTGAAGGAAACCTGATCATGTCGGCAACTCTAACGAGTCCAAAAGACATAGCCTTTCTGATCAAGAAT
GGTTCTGGTATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTCAC
CTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCACCGTGGATGCAAAATCAGGAACGTC
AACAGGAGTCTCAGCTTCAGACAGGGCCATGACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGAT
GATTTCAGGAGACCAGGTCATGTGTTCCCTCTCAAGTACAGAGAGGGTGGAGTTTTGAGGAGAGCCGGTC
ACACTGAAGCTTCGGTAGATCTAATGATATTAGCTGGTTTACGTCCAGTATCAGTTCTTTCAGCTATTCT
TGATCAAGAAGATGGGTCTATGGCTTCACTACCATATATGAAAAAGCTTGCTACAGAACATGACATTCCC
ATTGTATCCTTGACTGATCTAATCAGATATCGAAGAAAGCGAGATAAGCTAGTGGAGAGAATCACCGTGT
CTCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCTACCGATCAAAACTCGATGGAGCCGAAAA
TATAGCACTTGTTAAGGGAAACATCGGAAACGGTCAGGATATTCTGGTGCGGGTGCATTCAGAGTGCTTA
ACCGGAGACATATTCGGTTCAGCACGGTGTGACTGTGGAAACCAATTGGAGTTAGCCATGCAGCTAATCG
AGAAAGAGGGAAGAGGCGTGGTTGTGTATCTTAGGGGACACGAAGGAAGAGGCATTGGTCTTGGTCACAA
GCTTAGAGCTTATAACTTGCAAGACGAAGGACACGACACTGTTCAGGCCAACCTTGAACTTGGTCTAGCC
ATTGATGCTCGTGAATATGGTATTGGTGCTCAGATGCTTCGGGATATAGGAGTGAGAACAATGAGGCTGA
TGACGAATAATCCAGCGAAGTTCACAGGTCTGAAAGGGTACGGACTGGCAGTAGTTGGGCGTGTGCCGGT
GGTGACACCAATCACCAATGAGAACAGAAGATACATGGAGACCAAACGCAAGAAGATGGGTCACATTTAT
ATCTCTGACATCGATCAGCCTTTGGTTTGA
Upstream Sequence
GTGATTTTGTTTCTGTTACATCCTTGTAAAATGTCTGCTTTATGTTTTTTTTCTTTTCTTGAAGTAGTAG
ATTTGGATACGTAAACAAGTAAACAATCTAAAGGAGACGTGAAGCAGCGAATCGATCGTACCAAGATATA
TACTTTCATGTCCTTATCCTCTGCGTTATTCATAACGATCCTGTAGATGGATTCTGCTTTATCTCCTCGC
ATTCTTTTCCCACACAGCTTCGTTAACTCAAGGTCGCCTAGGTTTGGAGCTACGAGTACTACTTGCTGGA
GATTAGTTAATACTTTATCTTGGGAGGCCAAGGCTATTGGGAACAGTGATCGCAATGAAAGTCCTCTCAA
AGGAACAGATGGTTCTTTCTTTGATCATGTTGACGCGGAACTCACGCCTGAGACTGTTGATTTCTTCGTG
AGTGACGCAGAAGGTGATCCAGATTGTCCTACTCAAGGCTACTCCTCTATCGAACTCGCTCTTCAATCTC
TACGCCAAGGGAAGTTTTTGATCGTTGTTGACGATGAGAACGGGGATGTTGAAGGAAACCTGATCATGTC
GGCAACTCTAACGAGTCCAAAAGACATAGCCTTTCTGATCAAGAATGGTTCTGGTATTGTTTCAGTTGGG
ATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTCACCTGAAATGGAAGATGAAGATTCCT
CTGCACCAACTTTCACCATCACCGTGGATGCAAAATCAGGAACGTCAACAGGAGTCTCAGCTTCAGACAG
GGCCATGACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGTCATGTG
TTCCCTCTCAAGTACAGAGAGGGTGGAGTTTTGAGGAGAGCCGGTCACACTGAAGCTTCGGTAGATCTAA
TGATATTAGCTGGTTTACGTCCAGTATCAGTTCTTTCAGCTATTCTTGATCAAGAAGATGGGTCTATGGC
TTCACTACCATATATGAAAAAGCTTGCTACAGAACATGACATTCCCATTGTATCCTTGACTGATCTAATC
AGATATCGAAGAAAGCGAGATAAGCTAGTGGAGAGAATCACCGTGTCTCGTTTGCCTACCAAATGGGGTC
TTTTCCAAGCTTATTGCTACCGATCAAAACTCGATGGAGCCGAAAATATAGCACTTGTTAAGGGAAACAT
CGGAAACGGTCAGGATATTCTGGTGCGGGTGCATTCAGAGTGCTTAACCGGAGACATATTCGGTTCAGCA
CGGTGTGACTGTGGAAACCAATTGGAGTTAGCCATGCAGCTAATCGAGAAAGAGGGAAGAGGCGTGGTTG
TGTATCTTAGGGGACACGAAGGAAGAGGCATTGGTCTTGGTCACAAGCTTAGAGCTTATAACTTGCAAGA
CGAAGGACACGACACTGTTCAGGCCAACCTTGAACTTGGTCTAGCCATTGATGCTCGTGAATATGGTATT
GGTGCTCAGATGCTTCGGGATATAGGAGTGAGAACAATGAGGCTGATGACGAATAATCCAGCGAAGTTCA
CAGGTCTGAAAGGGTACGGACTGGCAGTAGTTGGGCGTGTGCCGGTGGTGACACCAATCACCAATGAGAA
CAGAAGATACATGGAGACCAAACGCAAGAAGATGGGTCACATTTATATCTCTGACATCGATCAGCCTTTG
GTTTGACCCACAAGCATTTGATAGAAACAAAGACTTTAATTTTGTTAATCAGTTTAATCACACTGCCAGA
GGAAAGGCCTCTTTTATACACATAATTCAATGTAAAGCCCAAATGTATTTATGGTCCATCAAAGCCCATC
AGTAGC
Downstream Sequence
GGTTTGAATGATGATAACTCTCTCCCTCTTTGTTATGTGGTTTATCTTGTGTTGTCTCCT
TGAAAACACTGGCTCTCTTACTTGTACAGGTCGCCTAGGTTTGGAGCTACGAGTACTACT
TGCTGGAGATTAGTTAATACTTTATCTTGGGAGGCCAAGGCTATTGGGAACAGTGATCGC
AATGAAAGTCCTCTCAAAGGAACAGATGGTTCTTTCTTTGATCATGTTGACGCGGAACTC
ACGCCTGAGACTGTTGATTTCTTCGTGAGTGACGCAGAAGGTGATCCAGATTGTCCTACT
CAAGGCTACTCCTCTATCGAACTCGCTCTTCAATCTCTACGCCAAGGGAAGGTTTGTTCT
TGAAGACCCCATTGGTTTATAAGTTGTGTAGACTCGGTCTTACCACGTTTCTTTCTTTCT
TTCTTATCAGTTTTTGATCGTTGTTGACGATGAGAACGGGGATGTTGAAGGAAACCTGAT
CATGTCGGCAACTCTAACGAGTCCAAAAGACATAGCCTTTCTGATCAAGAATGGTTCTGG
TATTGTTTCAGTTGGGATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTC
ACCTGAAATGGAAGATGAAGATTCCTCTGCACCAACTTTCACCATCACCGTGGTATagtt
tattaagaactttactatttttttccacaatttgaaaGTTCTCTATGTATATAACTTTAA
AAAAATTTAGGGGCAAATTAAAGTCCAATGTTTCATTTTTTAACTGTGTCCGGACCCGGG
CCAGTTTTGCAAAAAACAAATATGATATGATTCTCAAAAGTGTTTCAGCTCTTATATTCT
TGTTGGTTACAGGATGCAAAATCAGGAACGTCAACAGGAGTCTCAGCTTCAGACAGGGCC
ATGACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGT
CATGTGTTCCCTCTCAAGTACAGAGAGGGTGGAGTTTTGAGGAGAGCCGGTCACACTGAA
GCTTCGGTAGATCTAATGATATTAGCTGGTTTACGTCCAGTATCAGTTCTTTCAGCTATT
CTTGATCAAGAAGATGGGTCTATGGCTTCACTACCATATATGAAAAAGCTTGCTACAGAA
CATGACATTCCCATTGTATCCTTGACTGATCTAATCAGGTAAGTGAATAAGAATGTTAAT
GTATTTAGAAGATAGATAATTTTGGTTGAATTGTGTGTATCGGGATCTGATACCATATTA
ATTTAGATAGATTTCCATCTATCTTTACATATTATATGATCATTTCCAACTTCCGATGTG
ACAGAAGTCTCTAATAAATATGATATACTCGTAGATATCGAAGAAAGCGAGATAAGCTAG
TGGAGAGAATCACCGTGTCTCGTTTGCCTACCAAATGGGGTCTTTTCCAAGCTTATTGCT
ACCGATCAAAACTCGATGGAGCCGAAAATATAGCACTTGTTAAGGTACATCAAACACCAC
TTGCTTTAGATCAAAATCTTGATCAGTTTTGGTTAAGACTTAGACCAGTCTTGTTTTGTT
TCTGTCTGAACCAACCAGGGAAACATCGGAAACGGTCAGGATATTCTGGTGCGGGTGCAT
TCAGAGTGCTTAACCGGAGACATATTCGGTTCAGCACGGTGTGACTGTGGAAACCAATTG
GAGTTAGCCATGCAGCTAATCGAGAAAGAGGGAAGAGGCGTGGTTGTGTATCTTAGGGGA
CACGAAGGAAGAGGCATTGGTCTTGGTCACAAGCTTAGAGCTTATAACTTGCAAGACGAA
GGACACGACACTGTTCAGGCCAACCTTGAACTTGGTCTAGCCATTGATGCTCGTGAATAT
GGTATTGGTGCTCAGGTCAGCCATAAAATATTCAGTTTTGGTTTTAAATTTTTTTGGTTT
AGTTGGTTTAGATAGTTTGGTTATGTAGTTAGAAAAAAAAATTAGAATCAAACTAACAGG
TTTGGTTTCGGGAAAAAAAA
Pro Sequence
MDSALSPRILFPHSFVNSRSPRFGATSTTCWRLVNTLSWEAKAIGNSDRN
ESPLKGTDGSFFDHVDAELTPETVDFFVSDAEGDPDCPTQGYSSIELALQ
SLRQGKFLIVVDDENGDVEGNLIMSATLTSPKDIAFLIKNGSGIVSVGMK
QQDLERLNLTLMSPEMEDEDSSAPTFTITVDAKSGTSTGVSASDRAMTVL
TLASLEAKPDDFRRPGHVFPLKYREGGVLRRAGHTEASVDLMILAGLRPV
SVLSAILDQEDGSMASLPYMKKLATEHDIPIVSLTDLIRYRRKRDKLVER
ITVSRLPTKWGLFQAYCYRSKLDGAENIALVKGNIGNGQDILVRVHSECL
TGDIFGSARCDCGNQLELAMQLIEKEGRGVVVYLRGHEGRGIGLGHKLRA
YNLQDEGHDTVQANLELGLAIDAREYGIGAQMLRDIGVRTMRLMTNNPAK
FTGLKGYGLAVVGRVPVVTPITNENRRYMETKRKKMGHIYISDIDQPLV
mRNA Sequence
GTGATTTTGTTTCTGTTACATCCTTGTAAAATGTCTGCTTTATGTTTTTTTTCTTTTCTTGAAGTAGTAG
ATTTGGATACGTAAACAAGTAAACAATCTAAAGGAGACGTGAAGCAGCGAATCGATCGTACCAAGATATA
TACTTTCATGTCCTTATCCTCTGCGTTATTCATAACGATCCTGTAGATGGATTCTGCTTTATCTCCTCGC
ATTCTTTTCCCACACAGCTTCGTTAACTCAAGGTCGCCTAGGTTTGGAGCTACGAGTACTACTTGCTGGA
GATTAGTTAATACTTTATCTTGGGAGGCCAAGGCTATTGGGAACAGTGATCGCAATGAAAGTCCTCTCAA
AGGAACAGATGGTTCTTTCTTTGATCATGTTGACGCGGAACTCACGCCTGAGACTGTTGATTTCTTCGTG
AGTGACGCAGAAGGTGATCCAGATTGTCCTACTCAAGGCTACTCCTCTATCGAACTCGCTCTTCAATCTC
TACGCCAAGGGAAGTTTTTGATCGTTGTTGACGATGAGAACGGGGATGTTGAAGGAAACCTGATCATGTC
GGCAACTCTAACGAGTCCAAAAGACATAGCCTTTCTGATCAAGAATGGTTCTGGTATTGTTTCAGTTGGG
ATGAAGCAACAAGACCTTGAAAGATTAAACCTTACACTCATGTCACCTGAAATGGAAGATGAAGATTCCT
CTGCACCAACTTTCACCATCACCGTGGATGCAAAATCAGGAACGTCAACAGGAGTCTCAGCTTCAGACAG
GGCCATGACGGTTCTTACACTTGCCTCTCTTGAAGCTAAACCAGATGATTTCAGGAGACCAGGTCATGTG
TTCCCTCTCAAGTACAGAGAGGGTGGAGTTTTGAGGAGAGCCGGTCACACTGAAGCTTCGGTAGATCTAA
TGATATTAGCTGGTTTACGTCCAGTATCAGTTCTTTCAGCTATTCTTGATCAAGAAGATGGGTCTATGGC
TTCACTACCATATATGAAAAAGCTTGCTACAGAACATGACATTCCCATTGTATCCTTGACTGATCTAATC
AGATATCGAAGAAAGCGAGATAAGCTAGTGGAGAGAATCACCGTGTCTCGTTTGCCTACCAAATGGGGTC
TTTTCCAAGCTTATTGCTACCGATCAAAACTCGATGGAGCCGAAAATATAGCACTTGTTAAGGGAAACAT
CGGAAACGGTCAGGATATTCTGGTGCGGGTGCATTCAGAGTGCTTAACCGGAGACATATTCGGTTCAGCA
CGGTGTGACTGTGGAAACCAATTGGAGTTAGCCATGCAGCTAATCGAGAAAGAGGGAAGAGGCGTGGTTG
TGTATCTTAGGGGACACGAAGGAAGAGGCATTGGTCTTGGTCACAAGCTTAGAGCTTATAACTTGCAAGA
CGAAGGACACGACACTGTTCAGGCCAACCTTGAACTTGGTCTAGCCATTGATGCTCGTGAATATGGTATT
GGTGCTCAGATGCTTCGGGATATAGGAGTGAGAACAATGAGGCTGATGACGAATAATCCAGCGAAGTTCA
CAGGTCTGAAAGGGTACGGACTGGCAGTAGTTGGGCGTGTGCCGGTGGTGACACCAATCACCAATGAGAA
CAGAAGATACATGGAGACCAAACGCAAGAAGATGGGTCACATTTATATCTCTGACATCGATCAGCCTTTG
GTTTGACCCACAAGCATTTGATAGAAACAAAGACTTTAATTTTGTTAATCAGTTTAATCACACTGCCAGA
GGAAAGGCCTCTTTTATACACATAATTCAATGTAAAGCCCAAATGTATTTATGGTCCATCAAAGCCCATC
AGTAGC