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Detail for ZS11_C02G61230.t1

Genome:
ZS11: ZS11_C02G61230.t1
ZS11_v0: BnaC02T0503600ZS
WE: WE_C02G66210.t1
WE_v0: BnaC02T0486500WE
Darmor: C02p58870.1_BnaDAR
BH: BnaC02T381900BH
Quinta: BnaC02T0470100QU
ZS2: BnaC02T492900ZS2
SW: BnaC02T034000SW
Express61: C02p037140.2_BnaEXP
Xiaoyun: BnaC09G0184100XY
P202: BnaC06G061020P202.2
BL: BnaC02T381900BH
TA: BnaC02T504700TA
Da-Ae: Not available
RB: BnaC02T388000RB
No2127: BnaC06T0401000NO
P130: BnaC02G063600P130.1
Length: 68
KOG ID: KOG1223
KOG E-value: 2.920000e-08
KOG Score: 49.7
KOG Annotation: Amino acid transport and metabolism
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: CDY24986.1
NR E-value: 3.700000e-31
NR Score: 138.7
NR Annotation: CDY24986.1 BnaC02g40220D [Brassica napus]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: 1.240000e-07
SwissProt Score: 49.7
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (209 bp)
ATGCGGTATGATCCCCACGACAAAATATCTGTGGAATGGGAACCCACTGGTGCATTTTACTTTGTTGTGC
CTCATGTTATATTACTGAGTTTGGTGGAAGCTCGATGTTGGATGCAACTCTTGCTTGGGACAATGAACTT
TCTTGGACGCTGGAGAATGCTATTGAAGCACTTTAGGAGACTATGCTTCAGGTGTCTTCTGTTGTGA
Upstream Sequence
ATGCGGTATGATCCCCACGACAAAATATCTGTGGAATGGGAACCCACTGGTGCATTTTACTTTGTTGTGC
CTCATGTTATATTACTGAGTTTGGTGGAAGCTCGATGTTGGATGCAACTCTTGCTTGGGACAATGAACTT
TCTTGGACGCTGGAGAATGCTATTGAAGCACTTTAGGAGACTATGCTTCAGGTGTCTTCTGTTGTGA
Downstream Sequence
GTACAAGTTTGAATCTTTGAACTAATTTTCTGGAGGATGAGATTTTTTTTTTTGACTAAT
ATGTATGCTTCGTGTAAATTGCCTGATGCAAACGCAGGTTATATTACTGAGTTTGGTGGA
AGCTCGATGTTGGATGCAACTCTTGCTTGGGACAATGAACTTTCTTGGACGCTGGAGAAT
GCTATTGAAGCACTTTAGGAGACTATGCTTCAGGTAAACCTAGAACAAATTCTGCTTTTC
TGCCTTAAAGTTATTGAATGGTCTTTACACTAATGCGAAATTTGTTGTTTCAGGTGTCTT
CTGTTGTGATGAGGTTATGAAGGGGGTCTCTAGGAGTATTTGTTCTTAGCAAGAATCATG
TTCGACAAAAGGAACGTATTACCCTGCTGTAGAGAAGGCTTTGTAGATGATTAAGCAAAA
CAGTTCATCTCTTAGGCCTCAAACTGCTTCAACTGCGCGGGATATTGAGATAGAATGTGA
CTTACTAACCAGGTGAGTTTTTTATTCTACTGTTTTAAACAATCACATAATCCATTTTTA
TAATTGAAATTTCTGGATATGCATACTGACTTGGTTTAGTTAATTGCAGCAGCCCTAAAG
ATGATCTTGAGTTCTCTATTGTACAAGAGAATATATGAGACAAGTTAAACCGTAAGTTCA
ATCTTATTGCTCTTCATCTTTCAAACCTTTTGTCTGCAGTTAGTTTGAATTTTGACACTT
TAACAAGTGTATTAACACATGTTCAATTATCATATTTTTCCTTTCAGTCAATATGTGACA
AAAAACTGTGAGGAAGCTTGCAAGATTGCAACACATATATTCTCAATTGGTGGGGAGGCT
GAGGAGAGAAGTTGACGAGGTGAGGAATAATTTTACAACACATGATCATCTAGATAGCTT
ATAGTTAAGGGTTGTGAATGTTATCTCCATGCTTTTATTTTCTTCACACTGTGCTTGACT
CATTTGTGTTTTTATCTACGGtttgacatacaactccagctgtttgcgggctttcagcag
aagaagccaatacttttgatcaaggaaaagaggtgaaatatCACCTGGTTTTGTGATTTT
TTATTTGCTATATATTTTTGAGAATTGCCaTTTTTTCTTCTATCCATGTACTCTTGAGAA
TTGAATTGCCATACTCATTCGTTAtGATCAAtATAtGacCGGATGaGAATATCTTTAAAA
AATATAGTAATATCAAAAGATTTAAACGGGTCAATGGTTGTTTAATGGTTACACTGAAAA
AAATATTAAAATATTAATATCAAAAGCCTTTTACTCATATCACTACACCCAATTTTAGCA
AAAAAATGATATTATTTCACGAGGCTAAATTAACAAGATTATAAGTTTACTTTGTAACTT
ATTTGAATGTCACAGTTACGATTACATGTCATCCCTACACCACTGCAATCGGATGTGACA
CATATATTTTACAAATAGATTAAAATTTCATTTTTATAATTTAAAAACATTCACCGCTAT
TCAGTTACATTTTTTTTTAATTTTGATTAACTCAAATAATCATCGCTTCCACTGCAATAA
CATGTAAAAAGATTATGATTTCAACATAAAAAAAATTACTCTCGTAGCATACACAAAAAA
TTATCTACAATCCAATTTTTCCGAACCCAAAATATTACAAACCACAAATAACGCACCGAA
TATAGAATGAAATTTTTGTTAAATATCATAAAGACCATTTGAAGCCTATACAACATATCA
ATGCCATAACttttaatacagaaaactattgtaaacaatcaaaatATATCTTATCACATA
TAGTTCTTTCTTACTTAAAATTTTTTTGAAAACAAAATTATTATAACATTTATTGCAAAT
GCAATAAATACAAACTACCAAATCATACAAAAAAAATAATAACATATATCACAAATAAAT
TATATCCTGCACGTAGGGTGTACCGATCCTAGTGGTCTATTAAAATCTAAGATAAACTCT
TAGTTTAAGTAATAGTATAA
Pro Sequence
MRYDPHDKISVEWEPTGAFYFVVPHVILLSLVEARCWMQLLLGTMNFLGR
WRMLLKHFRRLCFRCLLL
mRNA Sequence
ATGCGGTATGATCCCCACGACAAAATATCTGTGGAATGGGAACCCACTGGTGCATTTTACTTTGTTGTGC
CTCATGTTATATTACTGAGTTTGGTGGAAGCTCGATGTTGGATGCAACTCTTGCTTGGGACAATGAACTT
TCTTGGACGCTGGAGAATGCTATTGAAGCACTTTAGGAGACTATGCTTCAGGTGTCTTCTGTTGTGA