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Detail for ZS11_C02G67300.t1

Genome:
ZS11: ZS11_C02G67300.t1
ZS11_v0: BnaC02T0554900ZS
WE: WE_C02G72420.t1
WE_v0: BnaC02T0536800WE.1
Darmor: C02p64800.1_BnaDAR
BH: BnaC07T221400BH
Quinta: BnaC02T0543100QU.1
ZS2: BnaC02T543700ZS2
SW: BnaC09T073200SW
Express61: C02p039560.2_BnaEXP
Xiaoyun: BnaC02G0560300XY
P202: BnaC02G043940P202.1
BL: BnaC07T221400BH
TA: BnaC02T581600TA
Da-Ae: Not available
RB: BnaC02T441600RB
No2127: BnaC02T0506700NO
P130: BnaC02G069030P130.4
Length: 628
KOG ID: KOG2403
KOG E-value: Not available
KOG Score: 1216.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0022900(electron transport chain)
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity),GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0050660(flavin adenine dinucleotide binding)
KEGG Ortholog: K00234 SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
NR Protein: XP_013621687.1
NR E-value: Not available
NR Score: 1273.1
NR Annotation: XP_013621687.1 PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like isoform X1 [Brassica oleracea var. oleracea]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1216.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (1913 bp)
ATGTGGCGCTGCGTCTCTCGTAGCCTTCGTGTTCCTTCCTCAAGGAACTCCTCGCTCTCTGGATCTCGCT
TCCCTAGATTCTTCTCCTCCGCTTCTCAGACCGGTGATTACACGATAGTGGATCACACCTATGACGCGGT
GGTGGTGGGAGCTGGTGGTGCAGGGCTTAGGGCGGCCATTGGATTATCGGAGCATGGCTTTAACACCGCT
TGCATCACCAAGCTTTTCCCCACACGCTCCCATACCGTCGCTGCTCAGGGTGGTATTAATGCTGCTCTCG
GAAACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTCAAAGGCAGTGACTGGCTTGGTGA
TCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCTAAAGCTGTCATTGAACTTGAGAACTACGGCCTT
CCCTTTTCTCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTTGACTTTGGCA
AAGGTGGGCAGGCCTATCGTTGTGCCTGTGCTGCGGATCGGACTGGGCATGCTCTCTTGCATACCCTTTA
TGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTCGATTTGCTCATGGCTAGT
GATGGCAGTTGCCAGGGTGTTATTGCATTAAACATGGAAGATGGAACACTCCATCGTTTCCGCTCTGCAC
AAACAATTTTGGCCACTGGGGGTTATGGAAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAGG
AGATGGCAATGCCATGGTTGCACGTGCTGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAATTCCATCCA
ACTGGTATATATGGAGCCGGTTGTCTCATCACCGAAGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACA
GTGAAGGTGAACGATTTATGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTC
CAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCACAAGGATCATATCTACCTCCAT
TTGAATCATCTTCCACCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATATTTG
CTGGTGTTGATGTCACCAAAGAGCCTATTCCAGTCTTGCCCACTGTTCACTACAACATGGGTGGTATCCC
AACAAATTACCACGGCGAGGTAGTGACCATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATG
GCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCAAACAGGCTCGGTGCAAATTCTCTCCTCGACA
TTGTTGTGTTTGGCCGTGCTTGTGCAAATAGGGTTGCAGAGATAAGTAAACCAGGTGAGAAACAGAGACC
TCTAGAGGAGAATGCAGGAAAGAAGACAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTT
CCTACTTCAAGTATCAGGTTGAACATGCAGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAG
AAACATTGGAAGAAGGTTGTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAAGTTAAAGA
TCGGAGTTTGATATGGAACTCTGATTTGATAGAGACAATAGAACTGGAGAACCTTTTGATAAACGCTTCC
ATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGACTTCACGAAAA
GAGAGGATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAGGTGAGGTTGGAGTATAG
GCCTGTTCACATGGACACTCTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGCGTCTATTAA
Upstream Sequence
AGTAAAAGGGAATAGAAAGAGTTGATCGTTTTCTATTTTTCTTAGTGAAGGAAGAACCTCACCTCGGTGG
CTCTCTCTCGCTCGCGAGTTGTGAGGAAAAGCACACTATATTTGTCTGTTCATTTCTACGGAGGAGTTGC
AGCATACAAGTCATTCACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGTGGCGCTGCGTCTCT
CGTAGCCTTCGTGTTCCTTCCTCAAGGAACTCCTCGCTCTCTGGATCTCGCTTCCCTAGATTCTTCTCCT
CCGCTTCTCAGACCGGTGATTACACGATAGTGGATCACACCTATGACGCGGTGGTGGTGGGAGCTGGTGG
TGCAGGGCTTAGGGCGGCCATTGGATTATCGGAGCATGGCTTTAACACCGCTTGCATCACCAAGCTTTTC
CCCACACGCTCCCATACCGTCGCTGCTCAGGGTGGTATTAATGCTGCTCTCGGAAACATGTCTGAAGATG
ACTGGAGATGGCACATGTATGATACTGTCAAAGGCAGTGACTGGCTTGGTGATCAAGATGCTATCCAGTA
CATGTGTAGAGAGGCACCTAAAGCTGTCATTGAACTTGAGAACTACGGCCTTCCCTTTTCTCGTACTGAA
GAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTTGACTTTGGCAAAGGTGGGCAGGCCTATC
GTTGTGCCTGTGCTGCGGATCGGACTGGGCATGCTCTCTTGCATACCCTTTATGGACAAGCTATGAAGCA
TAACACACAGTTCTTTGTTGAATACTTCGCTCTCGATTTGCTCATGGCTAGTGATGGCAGTTGCCAGGGT
GTTATTGCATTAAACATGGAAGATGGAACACTCCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTG
GGGGTTATGGAAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAGGAGATGGCAATGCCATGGT
TGCACGTGCTGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAATTCCATCCAACTGGTATATATGGAGCC
GGTTGTCTCATCACCGAAGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGAACGATTTA
TGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCCAGATCTATGACTATGGA
AATCAGGGAAGGTCGTGGTGTAGGACCGCACAAGGATCATATCTACCTCCATTTGAATCATCTTCCACCA
GAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATATTTGCTGGTGTTGATGTCACCA
AAGAGCCTATTCCAGTCTTGCCCACTGTTCACTACAACATGGGTGGTATCCCAACAAATTACCACGGCGA
GGTAGTGACCATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCT
TGTGCATCTGTTCATGGTGCAAACAGGCTCGGTGCAAATTCTCTCCTCGACATTGTTGTGTTTGGCCGTG
CTTGTGCAAATAGGGTTGCAGAGATAAGTAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGG
AAAGAAGACAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACTTCAAGTATCAGG
TTGAACATGCAGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTT
GTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAAGTTAAAGATCGGAGTTTGATATGGAA
CTCTGATTTGATAGAGACAATAGAACTGGAGAACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCG
GAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGACTTCACGAAAAGAGAGGATGGAGAATGGA
TGAAGCATACATTGGGGTACTGGGAAGATGAGAAGGTGAGGTTGGAGTATAGGCCTGTTCACATGGACAC
TCTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGCGTCTATTAATTGATTCCCTTCCCCTCACAC
ACAAGCAAAGTAGCAGCCATATGCTTTATTACTTTTTATGTCATCAGAATAATTAATAACAATATCAGGG
GAAGGAAAATGGAATTAGAAGAAGACCAAAAGAAAAATATTGTTTTCTACTTGTTACAGTGTTGATAAGC
TCATGATGGAGGACAAAGCAGCGTTCGACGTCATCATCTGGGTTTTTACATTTTGACACCTGAAGTGTGT
AATAAAGTGATTACAAACAAAAGAAAACTTTATTTGTTTGATATATTTCTCTTTTTTTATCATTTcctgg
aacactacactttgtgaTATAAGCAGTTTTTAAATATGTTTT
Downstream Sequence
TGTAAGATCTCTCTCTCTCTCTCTTCCGATTATTAGTTTTCCGTTTCGATCGTATGTGGA
AGCTCTCTCGAGAGAGAGATAGAGTTGTGAACCTCACAGGGCGTCTAGTTTATTCACATG
ATAGTTTTGTTGAAAACCTGTCATTCTGTTAGGTTTTATATTTGGATGGGATCGCGTTTT
GTAGAAATGCTTTGTGCTGATTGATAATGCATGATGCAGCAGACCGGTGATTACACGATA
GTGGATCACACCTATGACGCGGTGGTGGTGGGAGCTGGTGGTGCAGGGCTTAGGGCGGCC
ATTGGATTATCGGAGCATGGCTTTAACACCGCTTGCATCACCAAGCTTTTCCCCACACGC
TCCCATACCGTCGCTGCTCAGGGTGGTATTAATGCTGCTCTCGGAAACATGTCTGAAGAT
GACTGGAGATGGCACATGTATGATACTGTCAAAGGCAGTGACTGGCTTGGTGATCAAGAT
GCTATCCAGTACATGTGTAGAGAGGCACCTAAAGCTGTCATTGAACTTGAGAACTACGGC
CTTCCCTTTTCTCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGT
CTTGACTTTGGCAAAGGTCTTACTCTCTCTCTCTCTCTCTCTCTAACGTCTTTTTGTTTC
GAAAGCTTCTCATATTTGGCTTTCTTTTTCTTTTACCATCAGGTGGGCAGGCCTATCGTT
GTGCCTGTGCTGCGGATCGGACTGGGCATGCTCTCTTGCATACCCTTTATGGACAAGCTA
TGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTCGATTTGCTCATGGCTAGTG
ATGGTATGTGTCTGAGAGCTTTTTTCTTTCTTTTTTTTTTTTTTGCTGTCGGTATTCATG
CAACATTGTTACTTCATTCATATGCAGGCAGTTGCCAGGGTGTTATTGCATTAAACATGG
AAGATGGAACACTCCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTGGGGTGAGCT
AGTTTTTATGTAAGACCAAGTTTTCCAGTAGTGCAAATATGCTCACCTGAAGGCTGGTGT
TTTTTTCCCAGGGTTATGGAAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAG
GAGATGGCAATGCCATGGTTGCACGTGCTGGTCTTCCACTCCAGGTTTGCCACCGCTTTC
GTTTTGAGATAAATGGTGTATAAAGTCTTTGTGTGCTATTCTTGTCTAATAACTTTGTGC
AGGACTTGGAGTTTGTTCAATTCCATCCAACTGGTATATATGGAGCCGGTTGTCTCATCA
CCGAAGGTTAGCATCTTGTTGTCCTCACATGCACTAATTTGAAGATTTAATGCGTTTGTC
TATTATACAATTGCAGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGAA
CGATTTATGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCC
AGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGTATGCTTCCCTTTAAACTA
GTTTTCTTTTTTTTTTTTTGGAGGAACTCTCATTACATGTCTTTGAGCTGTATCCGTGCT
TGATTTTGTGATACTTTAATACTCTTTTTTTTTTTTGGATCTGTTGCTAAAATCGCCAGG
ACCGCACAAGGATCATATCTACCTCCATTTGAATCATCTTCCACCAGAAGTTCTAAAAGA
AAGGCTTCCTGGAATCTCTGAGACAGCTGCAATATTTGCTGGTGTTGATGTCACCAAAGA
GCCTATTCCAGTCTTGCCCACTGTTCACTACAACATGGGTGGTATCCCAACAAATTACCA
CGGCGAGGTAAGAATAGGAGAAGCCCTTTTAGAAGTTTTGGGTGAAATTTGTGTAGATGA
GATGCATTAAAAGTCTCGCAGCCAAAGTAATTCTTTTCATTTTTGTCCTGCAGGTAGTGA
CCATAAAAGGAGATGATCCA
Pro Sequence
MWRCVSRSLRVPSSRNSSLSGSRFPRFFSSASQTGDYTIVDHTYDAVVVG
AGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDD
WRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKI
YQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE
YFALDLLMASDGSCQGVIALNMEDGTLHRFRSAQTILATGGYGRAYFSAT
SAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGI
LRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLH
LNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNY
HGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRA
CANRVAEISKPGEKQRPLEENAGKKTIEWLNKLRHSSGSLPTSSIRLNMQ
RIMQNNAAVFRTQETLEEGCQLIDKAWESFEDVQVKDRSLIWNSDLIETI
ELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDE
KVRLEYRPVHMDTLDDEIDTFPPKARVY
mRNA Sequence
AGTAAAAGGGAATAGAAAGAGTTGATCGTTTTCTATTTTTCTTAGTGAAGGAAGAACCTCACCTCGGTGG
CTCTCTCTCGCTCGCGAGTTGTGAGGAAAAGCACACTATATTTGTCTGTTCATTTCTACGGAGGAGTTGC
AGCATACAAGTCATTCACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGTGGCGCTGCGTCTCT
CGTAGCCTTCGTGTTCCTTCCTCAAGGAACTCCTCGCTCTCTGGATCTCGCTTCCCTAGATTCTTCTCCT
CCGCTTCTCAGACCGGTGATTACACGATAGTGGATCACACCTATGACGCGGTGGTGGTGGGAGCTGGTGG
TGCAGGGCTTAGGGCGGCCATTGGATTATCGGAGCATGGCTTTAACACCGCTTGCATCACCAAGCTTTTC
CCCACACGCTCCCATACCGTCGCTGCTCAGGGTGGTATTAATGCTGCTCTCGGAAACATGTCTGAAGATG
ACTGGAGATGGCACATGTATGATACTGTCAAAGGCAGTGACTGGCTTGGTGATCAAGATGCTATCCAGTA
CATGTGTAGAGAGGCACCTAAAGCTGTCATTGAACTTGAGAACTACGGCCTTCCCTTTTCTCGTACTGAA
GAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTTGACTTTGGCAAAGGTGGGCAGGCCTATC
GTTGTGCCTGTGCTGCGGATCGGACTGGGCATGCTCTCTTGCATACCCTTTATGGACAAGCTATGAAGCA
TAACACACAGTTCTTTGTTGAATACTTCGCTCTCGATTTGCTCATGGCTAGTGATGGCAGTTGCCAGGGT
GTTATTGCATTAAACATGGAAGATGGAACACTCCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTG
GGGGTTATGGAAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAGGAGATGGCAATGCCATGGT
TGCACGTGCTGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAATTCCATCCAACTGGTATATATGGAGCC
GGTTGTCTCATCACCGAAGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGAACGATTTA
TGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCCAGATCTATGACTATGGA
AATCAGGGAAGGTCGTGGTGTAGGACCGCACAAGGATCATATCTACCTCCATTTGAATCATCTTCCACCA
GAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATATTTGCTGGTGTTGATGTCACCA
AAGAGCCTATTCCAGTCTTGCCCACTGTTCACTACAACATGGGTGGTATCCCAACAAATTACCACGGCGA
GGTAGTGACCATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCT
TGTGCATCTGTTCATGGTGCAAACAGGCTCGGTGCAAATTCTCTCCTCGACATTGTTGTGTTTGGCCGTG
CTTGTGCAAATAGGGTTGCAGAGATAAGTAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGG
AAAGAAGACAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACTTCAAGTATCAGG
TTGAACATGCAGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTT
GTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAAGTTAAAGATCGGAGTTTGATATGGAA
CTCTGATTTGATAGAGACAATAGAACTGGAGAACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCG
GAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGACTTCACGAAAAGAGAGGATGGAGAATGGA
TGAAGCATACATTGGGGTACTGGGAAGATGAGAAGGTGAGGTTGGAGTATAGGCCTGTTCACATGGACAC
TCTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGCGTCTATTAATTGATTCCCTTCCCCTCACAC
ACAAGCAAAGTAGCAGCCATATGCTTTATTACTTTTTATGTCATCAGAATAATTAATAACAATATCAGGG
GAAGGAAAATGGAATTAGAAGAAGACCAAAAGAAAAATATTGTTTTCTACTTGTTACAGTGTTGATAAGC
TCATGATGGAGGACAAAGCAGCGTTCGACGTCATCATCTGGGTTTTTACATTTTGACACCTGAAGTGTGT
AATAAAGTGATTACAAACAAAAGAAAACTTTATTTGTTTGATATATTTCTCTTTTTTTATCATTTcctgg
aacactacactttgtgaTATAAGCAGTTTTTAAATATGTTTT