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Detail for ZS11_C03G17270.t1

Genome:
ZS11: ZS11_C03G17270.t1
ZS11_v0: BnaC03T0155300ZS
WE: WE_C03G12850.t1
WE_v0: BnaC03T0095600WE
Darmor: C03p18160.1_BnaDAR
BH: BnaC03T168600BH
Quinta: BnaC03T0147500QU
ZS2: BnaC03T162000ZS2
SW: BnaC03T161900SW
Express61: C03p016880.1_BnaEXP
Xiaoyun: BnaC03G0155900XY
P202: BnaC03G017170P202.1
BL: BnaC03T168600BH
TA: BnaC03T160400TA
Da-Ae: Not available
RB: BnaC03T171500RB
No2127: BnaA03T0134800NO
P130: BnaC03G013980P130.1
Length: 170
KOG ID: KOG3365
KOG E-value: 2.440000e-113
KOG Score: 320.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022904(respiratory electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03949 NDUFA5; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
NR Protein: XP_013686838.1
NR E-value: 8.600000e-93
NR Score: 344.7
NR Annotation: XP_013686838.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Brassica napus]
SwissProt Protein: Q9FLX7|NDUA5_ARATH
SwissProt E-value: 1.040000e-112
SwissProt Score: 320.0
SwissProt Annotation: Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1
CDS Sequence (520 bp)
ATGTTCCTTCGTGCAATCGGACGGCCGTTATTGGCCAAAGTGAAGCAGACGACGGGGATCGTGGGGCTCG
ACGTCGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCCGT
GCCGGAGGACGAAGGATACCGTAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGCAAGGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTCGAGGAGCTCATCGAGGAGGCGC
AAGATGAGCTCACACTCATTGCGAAGATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAACGATGCACCCATTCCCAAGCACGTTCCTCAGCATCGACCTGGTCCTCTTCCTGAG
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCCGCTACCTCCA
CTGATTCGCAGTTGAAGGAGTGA
Upstream Sequence
ATGTTCCTTCGTGCAATCGGACGGCCGTTATTGGCCAAAGTGAAGCAGACGACGGGGATCGTGGGGCTCG
ACGTCGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCCGT
GCCGGAGGACGAAGGATACCGTAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGCAAGGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTCGAGGAGCTCATCGAGGAGGCGC
AAGATGAGCTCACACTCATTGCGAAGATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAACGATGCACCCATTCCCAAGCACGTTCCTCAGCATCGACCTGGTCCTCTTCCTGAG
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCCGCTACCTCCA
CTGATTCGCAGTTGAAGGAGTGA
Downstream Sequence
GGTGCGTGTGCTCTCTCCTTCTCTTTGCATTATCATGCGATTCGTTTTGCTATTTTATCT
GATTTTGAGGATGTAGATTGAGATTTTGAGATTAGAATGTTAATTTAGGTTTCTTGTTAG
GGAAAACTTTGAGCTGTAGAATGTTAGGTAGAGAAATCTCAACACAGGGGATTGCAAAGG
TGTCATCTTTATGGGCTATAAAGGCTAAGTGAAAGGAAGTATGTGTGAAATGGAAGTAAG
GGAATGCAAAAGGCAAGCTTTTGTTATTGTTTGCTAGCTTTAGGCGTATGGGTGAATGTT
TGTGTAGTTTACTTATGTGTGGAACGGTTTTTGCTTCAGTGACTGTCACATAGGTTTGGT
CGTGTTTTAAATTGGTAGTATATGCTTGCGAAAGCCGCTCTTTTTCGAGTTTCATGATCC
TTTAAGTGAGGTTTAAGGCATCTTCGTTTCTTCTTCTTTTGTAGAAGTAACTATTTTTTG
AGCTCCCATCACATTCTTGTGTTGATTTTCATTGTGTCCTCTTTATCGGCTGTCAAGTTA
GTGAAAAGAAAGTATTGAGTTATTCATGGGTATTGAAATTTTAAACTGAAACTGAATAAA
TGCAAAAGTTGAGCTTTTTGTAATGTTTGCTAACTTGGGCGTATGGGTGAATGTCTGCGT
TGTTTGCTTTAGTTTGGAACTGTTTTGCTTCAGTGTCACATAGGTTTGGTCATGTTCTAA
ATGTGAAGTTACTTCCCGTTCCAGTTTTGTTGAGGTTATTGCTGTCTTCGTCTTTGTTAA
TCTTGTTGTTGTTGGCTTGTTTTGATGCTTGAGCTATTTTGGGCCTTTTTTTTTTGGAGA
ATCTGTTGAAGCTTAATGATCTCGCTGACTTTGTTTGACTTCTTGGGTTGCATGGCGTGT
TTGGTTATCTCTGTGTTGTGTAATGATGAAGAAATTACAATTACCATAATGATGGTGTTT
GAAAATGTTTGATCACAAGGCTCTAACCTCCTCGCCTTGGCGCCAGGCGCCTTCTAAAAC
ACAGGAATTGCATGATCCTTTAAGTAGTTAGGCTTCAGGCATCTTATTTCTGTAACCGGC
TTTTGTAGAAGTAGCTACTGTTTGAGCCCTTATCACCTTCTTGTGCTGTATTATGCTACG
GAACAGACTTTCAATGGTTCATCGAATTTTGGAACCTTTTGTTCTGAGTTTGCTCATTTT
ACAAACACTTTCATCACCGTGGAGCTGTAATGTCTTTTGATTTGCGATTGCAGAATGGGA
CCCTTGGGGTGTTCCAGATGACTACGAGTGTGAAGTAATTGAGAACGATGCACCCATTCC
CAAGCACGTTCCTCAGCATCGACCTGGTCCTCTTCCTGAGGATTTCTACAGAACCCTTGA
AGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCCGCTACCTCCACTGATTCGCA
GTTGAAGGAGTGAGTAACTTCCAGTTCTACATTGTTTGTTTGTGTTCTTTGTTGCTTTGT
TTGGCCACTGTTCAGAGACAGCGAGCCTATGAATAAACTGGTTAATAATCTTTGAAAACT
AGAACAATATCACTCGTTTCATAAATGTTTTTATCTTTCTTCTCAAAGAACGTATGATGT
TTCATCCCCTTTGCAAAGAGCATTTACTTTTCTTTAAGACATGTACCCGATTACCTTGAA
CTCTATGGTACCCGATTAGCTCAGATAACACCAGATAGAGTCGGGGCCAGTCAAGCATTG
CCTATAGTCTCCAAAATTTATGAAAAAATAATATAGAAAGTAGAAACGAATCTTCAAATT
TGTAAAAAAAAAATTATTGAAAACTATTACTAAATCGTCTATGGTTCTCAAAATCTCGGG
TCGGTCATGGATAGAGTAACAACATTAGGTTCTACTCCTAGTCTTAACATTTTTTTGGGG
CAACAATCTCTATATCAACACTTCAAAACAATTCTGCTCAAATCCGTAATCCGCTTGACC
TAAGATTAACGTTGTCTAAG
Pro Sequence
MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPED
EGYRKAVESFTRHRLNVCKEEEDWEAIEKRLGCGQVEELIEEAQDELTLI
AKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEDFYRTLEGLI
SESKTKIPAAATSTDSQLKE
mRNA Sequence
ATGTTCCTTCGTGCAATCGGACGGCCGTTATTGGCCAAAGTGAAGCAGACGACGGGGATCGTGGGGCTCG
ACGTCGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCCGT
GCCGGAGGACGAAGGATACCGTAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGCAAGGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTCGAGGAGCTCATCGAGGAGGCGC
AAGATGAGCTCACACTCATTGCGAAGATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAGTG
TGAAGTAATTGAGAACGATGCACCCATTCCCAAGCACGTTCCTCAGCATCGACCTGGTCCTCTTCCTGAG
GATTTCTACAGAACCCTTGAAGGTCTAATTTCAGAGTCCAAAACAAAAATCCCAGCTGCCGCTACCTCCA
CTGATTCGCAGTTGAAGGAGTGA