SEARCH

DETAIL

Detail for ZS11_C03G20720.t1

Genome:
ZS11: ZS11_C03G20720.t1
ZS11_v0: BnaC03T0186700ZS
WE: WE_C03G16410.t1
WE_v0: BnaC05T0028900WE
Darmor: C03p21790.1_BnaDAR
BH: BnaC03T202600BH
Quinta: BnaA10T0027400QU
ZS2: BnaC03T192000ZS2
SW: BnaC03T196200SW
Express61: C03p019810.1_BnaEXP
Xiaoyun: BnaC03G0185500XY
P202: BnaA09G059800P202.1
BL: BnaC03T202600BH
TA: BnaC03T190000TA
Da-Ae: Not available
RB: BnaC03T205500RB
No2127: BnaC03T0112000NO
P130: BnaC03G016830P130.1
Length: 142
KOG ID: KOG3300
KOG E-value: 3.670000e-56
KOG Score: 173.0
KOG Annotation: Energy production and conversion; Cell cycle control, cell division, chromosome partitioning
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
NR Protein: VDC88875.1
NR E-value: 2.200000e-49
NR Score: 200.3
NR Annotation: VDC88875.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: O49313|NDADB_ARATH
SwissProt E-value: 1.560000e-55
SwissProt Score: 173.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1
CDS Sequence (435 bp)
ATGATAAGGAAGAAGCCAAGGATGGCGAGTGTGAAGGATATGCCTTTGCTTCAGGATGGTCCACCACCGG
GTGGGTTTCTTCCGGTTCGGTATGCTCGTCGGATCTCCAACACGGGTCCGAGCGCTATGGCTATTTTCCG
GTGCTTTTGTTTGGGGGGATGTACCAAGTCGGCCAAGGCAACAAAATACGCAGGTGGTCGGATTGTGATT
TATCAGCTTGACAACAACACATGTTATCCTCTGTTGGTTCTAATTAAGATTTGCTGTGGTGATGATAGAG
CGTTGAAGGAAGAGAAATACGCTGCGCGTAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAG
GTTTGTGTCTGAGTGGAACAAGTATCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAA
GTTGTATAA
Upstream Sequence
ATGATAAGGAAGAAGCCAAGGATGGCGAGTGTGAAGGATATGCCTTTGCTTCAGGATGGTCCACCACCGG
GTGGGTTTCTTCCGGTTCGGTATGCTCGTCGGATCTCCAACACGGGTCCGAGCGCTATGGCTATTTTCCG
GTGCTTTTGTTTGGGGGGATGTACCAAGTCGGCCAAGGCAACAAAATACGCAGGTGGTCGGATTGTGATT
TATCAGCTTGACAACAACACATGTTATCCTCTGTTGGTTCTAATTAAGATTTGCTGTGGTGATGATAGAG
CGTTGAAGGAAGAGAAATACGCTGCGCGTAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAG
GTTTGTGTCTGAGTGGAACAAGTATCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAA
GTTGTATAA
Downstream Sequence
GTAAATTATATAGATTCTAGCTCAAAATTTTACTTTTTTTTCTGGGAACAAGTAACCTTA
AAAGCTTCAAATTTTGTGTGTTTGTAGTGTTAAATTGGTTATGAATAACACACTGTAGGT
TAATTAACGATCCCTTGAGCTTTGGTGAAGATGATACTAGTTACTTGTGTTTGCTTGATA
CAGTATCATTACACAACACCAAAGCTTCAGTTTTTAGTCTTTATTTAGTTTACTAATAAC
CCATTTTATGGCTAATTAGTTGAACCCTTGAGATTTAGTGAAGAAAGCATTGTAATTGGA
AAAGGATGATGATACCAGTTACTTGGGTTTTGGTTTTTAGGTGGTCGGATTGTGATTTAT
CAGCTTGACAACAACACATGTTATCCTCTGTTGGTCAGCAATTCAGTTTCTTAATGATGA
CGAAAATGTTATAATGAGAATAATGTGTCACCACAAAGGTTCTAATTAAGATTTGCTGTG
GTGATGATAGAGCGTTGAAGGAAGAGAAATACGCTGCGCGTAGAGCTATTCTTCCCATTC
TTCAAGCAGAAGAAGATGAAAGGTTTACAAAACAAAACCAAAAAAAGTTATGTTTCTTGT
GGTATACTAGTCAGAGTTCAACTGAATCACATGTGTTTATTTGTAAATAGGTTTGTGTCT
GAGTGGAACAAGTATCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAA
GTTGTATAACTCTGGTCGTTGGATGCCTCCAGCTACTGGAGAGCTTCGTCCTGATGTCTG
GTCATATATTATCAATGCCTCCTTTTCATGATGATGATGAATATTGTGTAAGCATTTTAG
AACCTTGCTGTGTCTCTTCTTCTTATTCATCATATAATAAGAGAAATGATACATACACAC
TTCATGTATTGAGGAACATATTCTTGTTTTATTTCATTCACACCTTTCTTGTCTCTTTGT
CAATAGGAAACTTGGGTTTCTACATAGATAGATTTTGTTCACATTTTCTAATCAAGTTTT
GAAACTTCAGTATGTTTTCACATAAAAGTAGCTTATATATAATATGGTAACAAACACATT
ACCAACAAAATAAATTGATGTCTAAGAGTGGGAAGCCACATCTTCCTTACAACCAAAAAA
TCCAAAATCATATAAAtttaaaatatggtaatgccaatattgtgtgtGAACCCAGTAAGG
GTCTCTATCAATATTGCTCCAATAACAAAAGGTTAAAAAACCGATTACAAAAAATTAGTT
GTACATAGAGATGTTTCTTGCCACACAAGTAAAATATTGTCTGCTTTAACCTAACCTCCC
TGAAGAGAATGAACACGTAAGAATCAAATCAGGAGAGACGTAAGAATCAAATCAGCCCTC
TGAAACCCCTATTGACGAAACCTGTAGGATTCTACGTAGCGTAAATCTGTGCGAGGGAGT
AAAGGAATACTGTACAATTTCAGTTGTCAGATGAAGAACGGACCAAATAGGTCTCAGTCC
TTTAGAAAGTGGAAGTTAGGGTTATCAGCGAGTTCGACCGCTGCCTTTACATTGGTAAAT
TCCTTTTCTTGCATACAGTTGGAGATCTCATCGGCTGCAAAGGGGATGCTGAGTTTCACA
AAGACAGTTTCATGAGGTGTTATGGTGGTGAATAATGTCTGAATAACTGCGAGAAATTTA
CAAGTCCTTAATATTTTTAGTACCTGGAATCATTGTCTAACGAGAACGAACGGCTGTCTT
CGTCTTCATCTGTAATTAGAAGTTTCAAATTGGAAATCACCTGCATCGACAGAAAACATA
AAGCAGATAATGAAATGATACAAGAAGATTTGGTAACATGTATTATCGTTTATTTGAGAG
ATGTAAAGAGGAAACATACGTCCGGAGATACATTCTGATCCTTGTCGTCATCAATTTTGC
AGAGGGTACATATTCTATACAATTGCTGAGTACTAAGAGCCTGAGAGATTAAAGAAAGAG
ATAAGAGAGAGATCAGAAGA
Pro Sequence
MIRKKPRMASVKDMPLLQDGPPPGGFLPVRYARRISNTGPSAMAIFRCFC
LGGCTKSAKATKYAGGRIVIYQLDNNTCYPLLVLIKICCGDDRALKEEKY
AARRAILPILQAEEDERFVSEWNKYLDYEADVMKDVPGWKVV
mRNA Sequence
ATGATAAGGAAGAAGCCAAGGATGGCGAGTGTGAAGGATATGCCTTTGCTTCAGGATGGTCCACCACCGG
GTGGGTTTCTTCCGGTTCGGTATGCTCGTCGGATCTCCAACACGGGTCCGAGCGCTATGGCTATTTTCCG
GTGCTTTTGTTTGGGGGGATGTACCAAGTCGGCCAAGGCAACAAAATACGCAGGTGGTCGGATTGTGATT
TATCAGCTTGACAACAACACATGTTATCCTCTGTTGGTTCTAATTAAGATTTGCTGTGGTGATGATAGAG
CGTTGAAGGAAGAGAAATACGCTGCGCGTAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAG
GTTTGTGTCTGAGTGGAACAAGTATCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAA
GTTGTATAA