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Detail for ZS11_C03G29460.t1

Genome:
ZS11: ZS11_C03G29460.t1
ZS11_v0: BnaC03T0264600ZS
WE: WE_C03G25430.t1
WE_v0: BnaC03T0202400WE
Darmor: C03p30640.1_BnaDAR
BH: BnaC03T284400BH
Quinta: BnaC03T0253700QU
ZS2: BnaC03T269800ZS2
SW: BnaC03T273300SW
Express61: C03p026710.1_BnaEXP
Xiaoyun: BnaC03G0262700XY
P202: BnaC03G031000P202.1
BL: BnaC03T284400BH
TA: BnaC03T266300TA
Da-Ae: Not available
RB: BnaC03T285700RB
No2127: BnaC03T0187300NO
P130: BnaC03G024110P130.1
Length: 139
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0006121(mitochondrial electron transport, succinate to ubiquinone)
Cellular Component: GO:0016020(membrane),GO:0005743(mitochondrial inner membrane),GO:0005749(mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013734872.1
NR E-value: 3.000000e-67
NR Score: 259.6
NR Annotation: XP_013734872.1 succinate dehydrogenase subunit 4, mitochondrial [Brassica napus]
SwissProt Protein: Q941A0|SDH4_ARATH
SwissProt E-value: 1.280000e-63
SwissProt Score: 194.0
SwissProt Annotation: Succinate dehydrogenase subunit 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH4 PE=1 SV=1
CDS Sequence (425 bp)
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTTAC
CTTTCTCGGTGAGTAACATCTCCTCCCCATCCGCCGCCGTGAGAAACCCAATCGGGAGAGAAATCTCTTC
GATCCCATTTTTCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGAAATCTGATCTC
GCCAAATTCGCTCGTCTGCCATCGTCTCGAGGTTACAGTAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGAATGGAAGAAGTTTTGGCGGATTATGTTCATCAGGAGATGACCAGGAATCT
GATGGTGATCTCTCTGGGCTTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA
Upstream Sequence
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTTAC
CTTTCTCGGTGAGTAACATCTCCTCCCCATCCGCCGCCGTGAGAAACCCAATCGGGAGAGAAATCTCTTC
GATCCCATTTTTCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGAAATCTGATCTC
GCCAAATTCGCTCGTCTGCCATCGTCTCGAGGTTACAGTAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGAATGGAAGAAGTTTTGGCGGATTATGTTCATCAGGAGATGACCAGGAATCT
GATGGTGATCTCTCTGGGCTTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA
Downstream Sequence
AGCAAGGAATCATCTCATGGGCTCTCATGAACTCGATCATCTAGTGAGATAAAGTCCCTT
CTTATTATCTTTTAATGAATAAAGAACATTGGTGCAATGGCATCTTTAACCTTCCAAGTT
TGCTTCAGTTTGTGTAAGGCTTTAATTGGAATTCTAAGTGTGTTTGAAAGGGATATTAAG
AATCTCTCTTTGGATTGAATAAAAGAGAAGTTTTCTCAATTCTGGTCTTTTTTTTTTTTG
CAATTTCATCAAAGATGTGATCTCAGGTTTCTCTGCGGTATATATTATGTTGAATTTGTG
ATGCTTTATTGGTGTGATCTTGTACAAAGGCGATGGGGACTTTCAACAGGTCCGAAGAGA
TACATGAGACTGTAAAGAAGTAAGTTTGATCAGTGTTCCACAGCTGAAACGTTGAGTTGA
GTTGAGCTTATCCCCCGCAAAAAACCAATCCCATCCTCTGATTCATAGATTTATTTGGTT
TGTTGAGATACGCTCTCTGAGTTTCTATGGTGTTTATCGTATGAGCCACGTTCTGAACCC
CCAACATCTATTGACCTTAAAGATTCATGATACATGCTCTAGCTCTAGAGCGTCGGATTT
ACTCGATACGGTTTTCAGTTTCTCGACCGTATAGTGGGCTGAGCTTCTCAACTCATCCAC
AAGCCTCCCTCTTTCGTTCTTAAACGAATCACTCCTTCCAAAAAACAAAAAAAGTAATTA
AGAACATATCCAATATGGCTCGGAAAAAAACAAACTAGTTGGCAATGGTCTTGGTCTCAT
GCATAAAGTTCAGTTAAGACTTTATGCTCATGATTATCTACCTTCTTCAGGAATATACAA
GCTTGTTTTTAGCGTCTTTAAGGACTCGGTTTGTCACTCAAAAATCATCTATGGAGAGCG
AGAAAGAAGATTCTGTATTTTCTGCTGAAGAAGAGAACAAATCCCAAATGGTAGGGGAAA
ATATTGAATAATAATTATAGAGAAAATAATAAAAGGCCCAAATctaaaacttaacaaggc
ccaaacaagtggcatttctgttaaCTGGAAAATTACGATCTTATCCCCAATCATCCTAAA
CGGTGATATAATTACGATCTTATTCCCAAATCACTGACTTGCTTACCACTCCAAGGTTAA
AAGAATAATCAACCGCGACACATATGGTAAGAAATGGAATATAAGAACAAATATAATAAT
CGCCGTCACCTTTGACAATTAAAAGAGTAAATTTTTGTGTAATACGCGTCATCTACGCAA
ACTAGGTGGCGACACGTGTAATCCATTAAAAAAAAACCCTCTCTCTCTCTAAGGTCTATG
ACCCTTGTTTCTCTAGCTGCCATTGATCAATCAAACCCTAGCTCACAGACTTTGCTATAA
TTGGATCCTCCTTAAAGCTCCGTGTCTCGTCCTCCTTCGCTCTTTGATTCTTTCCTTGTG
GTAAGAATGCACTCCCTTTCCGTTTTGCTTCTTCTCGATTTTTAGATTTGCTCGCCGACC
GATCCCTGATCAATTGGATTTGATTTCTAGGGTTTATTGCAAGAAGAAGAAGCGATGGAT
TTGTGAATTTTAGTTATTATCGCGTCGGTTTGTTGTATTTCTATATTAGCAAAGTTCGTA
GCTTTCTCGAAATCCTTTTTAAGATGTCATCAGCTGATGTTACGCTAAGCCCGGTTCGTA
ACGAGCCATCGATGATGCCTCTCGTCCATGCCAATTCCTGTACTGATTCCCTCCCTGACG
AGACCATTTTGATCTACCTGACACTCCCCGGAACTCTGATACCAATGCGAGTGCTCGAAT
CCGATTCCATCGAGTCCGTTAAGCTCCGGATCCAGTCGTATCGCGGGTTTGTAGTGAGGA
ACCAGAAGCTCGTTTTCGGTGGACGAGAGCTCGCGAGGAGCAACTCCAACATGCGTGACT
ACGGCGTGAGTGATGGCAACGTTCTTCATTTGGTTGTCAAGGTCTCTGATCTCCAGGTTC
TTGATGTCAAGACCACTTGT
Pro Sequence
MSLRRSILGLHRQTHNLSLSKALPFSVSNISSPSAAVRNPIGREISSIPF
FLTQKLKPDSGNRSLGKSDLAKFARLPSSRGYSNASLVRKIPVLFHINAG
MEEVLADYVHQEMTRNLMVISLGLFQIIVIKDVIVFLFF
mRNA Sequence
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTTAC
CTTTCTCGGTGAGTAACATCTCCTCCCCATCCGCCGCCGTGAGAAACCCAATCGGGAGAGAAATCTCTTC
GATCCCATTTTTCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGAAATCTGATCTC
GCCAAATTCGCTCGTCTGCCATCGTCTCGAGGTTACAGTAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGAATGGAAGAAGTTTTGGCGGATTATGTTCATCAGGAGATGACCAGGAATCT
GATGGTGATCTCTCTGGGCTTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA