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Detail for ZS11_A02G15820.t1

Genome:
ZS11: ZS11_A02G15820.t1
ZS11_v0: BnaA02T0143400ZS
WE: WE_A02G16140.t1
WE_v0: BnaA02T0143500WE
Darmor: A02p11580.1_BnaDAR
BH: BnaC03T168600BH
Quinta: BnaA02T0143000QU
ZS2: BnaC03T162000ZS2
SW: BnaA02T161200SW
Express61: A02p014250.1_BnaEXP
Xiaoyun: BnaA02G0138200XY
P202: BnaC03G017170P202.1
BL: BnaC03T168600BH
TA: BnaC03T160400TA
Da-Ae: Not available
RB: BnaC03T171500RB
No2127: BnaA02T0142800NO
P130: BnaA10G011190P130.1
Length: 169
KOG ID: KOG3365
KOG E-value: 2.640000e-113
KOG Score: 320.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022904(respiratory electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03949 NDUFA5; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
NR Protein: XP_013687753.1
NR E-value: 1.100000e-92
NR Score: 344.4
NR Annotation: XP_013687753.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Brassica napus]
SwissProt Protein: Q9FLX7|NDUA5_ARATH
SwissProt E-value: 1.120000e-112
SwissProt Score: 320.0
SwissProt Annotation: Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1
CDS Sequence (517 bp)
ATGTTCTTACGAGCAATCGGACGGCCACTGTTGGCCAAAGCGAAGCAGACGACAGGGATCGTCGGGCTTG
ACGTAGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGTAAAGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTAGAGGAGCTCATCGAAGAGGCCC
AAGATGAGCTCACACTCATTGCCAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAATG
CGAAGTAATTGAGAACGATGCGCCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTTCCTGAG
GACTTCTACAGAACCCTTGAAGGTCTTCTTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCTGCTG
ATCCACAGTTGGAGAAGTAA
Upstream Sequence
ATGTTCTTACGAGCAATCGGACGGCCACTGTTGGCCAAAGCGAAGCAGACGACAGGGATCGTCGGGCTTG
ACGTAGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGTAAAGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTAGAGGAGCTCATCGAAGAGGCCC
AAGATGAGCTCACACTCATTGCCAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAATG
CGAAGTAATTGAGAACGATGCGCCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTTCCTGAG
GACTTCTACAGAACCCTTGAAGGTCTTCTTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCTGCTG
ATCCACAGTTGGAGAAGTAA
Downstream Sequence
GGTCCGTATGCTCTTCCCTTTCTTAAAACGCACCGGTTTGATGCCATTCATTTGCTATTT
GATTTGATGTTGAGAGTGTAGAACGAGTTTTGGATTAGAATCTGGAATCTAGAGGCGTTG
TGGATCGTTAGGTAGCAGAAAATAGACAGAGAGCATTGCAAAGAAGAACTCTTTATTGGG
TTTTAAGTTAGTGGACTGGAATGAAACTAAGAGTTAGTGGTCATTCAAGACGTAAGCTGA
AATGAAATGCAAAGATGGACTCTTTGTTGAGTATTAAGCTTATGGGTGAAGGTTTGCACA
GTTCACTTAAGTTTGGAACGGTCTTGTCTTGCTTCATTGTTATATAGGTGTGGTGGTGTT
CTTGCTTTGCAGCTAACCTAGGCGTATTAGTGAAAGAGTGCATATTTCACTTATGTTTGG
AGCGGTTCTTGCTTCACTGTCACATAGGCGTGGTCGTGTTCTTGCTTTTCAGTGAATCTA
AGGCGTATGGGGTTAAAGTTTGCATAGTTCACTTTAGTTTGGAACTGTTTTTGCTACATT
ATTGCATAGGTGTGGTCGTGTTATTGCTTTGCATCCAACCTAGGCGTATGGGTGAAAATT
TCCATAGGTCACTTAAGTTTGGAATGGTTCTTGCTTCATTGTCACGTACGTGTGTTCGTG
TTCTTGCTTTGGATCTACCTATACGTTAGTGTTAGTACTTGTAATAGCTCTCTTTTGAAT
ATTATAATCCTTCGAGCGAGGTTTTAGAAAATGTGACAGTGTTATGTTTGAGCCTAGTCA
CATTTTGGAGTTTTCCCCCATTGATAGCACGAGGTTGAAATATCTTATGTTTACATTTGC
AGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAATGCGAAGTAATTGAGAACGATGC
GCCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTTCCTGAGGACTTCTACAG
AACCCTTGAAGGTCTTCTTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCTGCTGA
TCCACAGTTGGAGAAGTAACTTCCAGTTTTACTTTGTGTGTACTTCTTGTTCTCTTTTTT
GGCTAGTGTTTGTTTCAGAGGCCAACTAAGAAATTGCGTAATAATTTTGAAAACAATAAC
AATGTCACTCTTTTCATAAATGTTTTTTCTTTCTTCTCAAAAACCAATGATAATCCAAAT
GATGTGTCTTCCCCATTGGAATAACATTTCCATTCTTAAGGACATGTACATGCTTCCCAT
ATCTTATAGTGACACTCTTATAAACTAGGTCATATGATTCATGAATGACATTAAATCATG
GCAAACCTTGCACATGATTTTGTTCTTAACAACATGAACCTGAGTTTTTGCTGAGACCAT
CTTCAATAACACACTATTTTTTCCTATATAAtttacattaaaatagaataactctattat
ataataatttttgctctgatgtgtacagaagaccGAAAACAACATTACGTTCTCATTACA
TGGTATGTAAAGCCTGATCTTTCGATCTCACTCCATCCATTCTACCTCTGTTTGATACTA
ATGTGAAAGTATTTGAAAATGCAAATGAAGCTCTATTTGATACTACCATAGAACGGGCAA
AGTTGGAAGAGGAGGCATGGAGAAGAGAAAATGACTGAGAGAAAGTGGAAGCACCTGCAA
GGGAAAGATGATGAGAGTTAGGAGCTTCTCAATCAATGTATATCCCAGTGTATCACTTGG
ATTATTGGCATGCTTCGAATCCCTTAGTACACATGAATTGGGGCTATCAGCGATGTAATT
TGTCAACTGGCTCTGAATGGATTAAGACGCACATTCTAAGCTCAGTAAAAAATAAAAACA
GAAAGTTGTACACACATTCTAATCTCAGTGAAAAAGAAAACCGAATTTGCTAACATTGAA
ATAACGTCCATTTAATTAAGCTCTAAGCATGTTTGAAATCACGTTCATTGTTTCTGTTGG
AATTTAATTAATTAAAGGAA
Pro Sequence
MFLRAIGRPLLAKAKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPED
EGYRKAVESFTRHRLNVCKEEEDWEAIEKRLGCGQVEELIEEAQDELTLI
AKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEDFYRTLEGLL
SESKTKIPAASSADPQLEK
mRNA Sequence
ATGTTCTTACGAGCAATCGGACGGCCACTGTTGGCCAAAGCGAAGCAGACGACAGGGATCGTCGGGCTTG
ACGTAGTACCGAACGCGAGGGCGGTGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCGGT
GCCGGAGGATGAAGGATACCGAAAAGCGGTGGAATCGTTCACGCGCCACCGTCTCAATGTGTGTAAAGAA
GAGGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAAGTAGAGGAGCTCATCGAAGAGGCCC
AAGATGAGCTCACACTCATTGCCAAAATGATCGAATGGGACCCTTGGGGTGTTCCAGATGACTACGAATG
CGAAGTAATTGAGAACGATGCGCCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTTCCTGAG
GACTTCTACAGAACCCTTGAAGGTCTTCTTTCAGAGTCCAAAACAAAAATCCCAGCTGCTAGCTCTGCTG
ATCCACAGTTGGAGAAGTAA