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Detail for ZS11_C03G43230.t1

Genome:
ZS11: ZS11_C03G43230.t1
ZS11_v0: BnaC03T0392900ZS
WE: WE_C03G40600.t1
WE_v0: BnaC03T0325800WE
Darmor: C03p45540.1_BnaDAR
BH: BnaC03T418400BH
Quinta: BnaA03T0315200QU
ZS2: BnaC03T396300ZS2
SW: BnaC03T407200SW
Express61: C03p039100.1_BnaEXP
Xiaoyun: BnaC01G0458800XY
P202: BnaC03G049570P202.1
BL: BnaC03T418400BH
TA: BnaC01T446800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g34900D
RB: BnaA01T395200RB
No2127: BnaC03T0313500NO
P130: BnaC03G037070P130.1
Length: 133
KOG ID: KOG3426
KOG E-value: 5.910000e-95
KOG Score: 270.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
NR Protein: XP_009135218.1
NR E-value: 2.100000e-70
NR Score: 270.0
NR Annotation: XP_009135218.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Brassica rapa]
SwissProt Protein: Q9LHI0|NDUA6_ARATH
SwissProt E-value: 2.510000e-94
SwissProt Score: 270.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=2 SV=1
CDS Sequence (407 bp)
ATGGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTCGCC
GCCGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCTCCA
AGACGTCGTCGCGCCTTCCCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACC
GACCCTAAGGTAATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCTA
AGCAGCGTCACCACATCATCGGTCAGTACGTTGTGGGTGAAGGGCTGGTGCAGAATACCGGAAGCAAAGA
TCAAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGA
Upstream Sequence
AAAACGACGTCGTTGACTGTTTCTCTCTCAAATCGATTAGTTCCTCTCTCATTTTGTCTTCTTTGCTTTC
GTTATCTCAGGAAGAGAAAAAAAAAAAAAATCTCGATTCATCGATCAAACAAGCGTTAGATAGATCAGAT
GGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTCGCCGC
CGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCTCCAAG
ACGTCGTCGCGCCTTCCCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACCGA
CCCTAAGGTAATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCTAAG
CAGCGTCACCACATCATCGGTCAGTACGTTGTGGGTGAAGGGCTGGTGCAGAATACCGGAAGCAAAGATC
AAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCATTTTCGAGTTTGCCG
TTCCAGTATTGTATTTCATGACTTGAAGAAGCCGTCTTCCCGAA
Downstream Sequence
GGTAACTTCCCCTAAGTAATCGCACTCTGATTAAAAAGTGGAAGACTTTCTTTGTCTGTG
TCCCTGAATCATTGAGCCTTTTTGCTTGTTAATCTGGGTTCTGTTGGGCTTTTGACTTGG
TTTAATCGTTATCTTTGTCTGAAAGTTGAGAGCTTTGGGGACTTAAATCTTCTGGTTAGT
TGAGTCTAGTCTATGATTGAAGTGCCTTTGTGGGTTGGGTGGTGGGTAGAGAGTTTCTCA
GAGCAGAAAGGTGTGAGCTTTGGGGACTTAATGTTGTGGGTAGTCGAGTCATATCGATGA
TCGAAGTGCCTTGTGTGTTGGGTGCTGGGTAGAGAGTTTCTCAGAGCAGAAAGCTGTGAG
CTACTTGATGTTCTGGGTAGTCTGAGTTTTATCGATGATAAAGTTTCTTGTGGGTTGGGT
GGTGGGTAGAGAGTGTCTCAGAGCGGAAAGGTGGGAGCTTTAGTCTAAAGCTGTGCTACC
TTTGTGTGTTCCTTCTGTGTGTGACATTAGATACTTTCCTTCTTTGCATTTGTCTAAAAG
AATATGGAACCAAAAGTCTGTGTGATGAATAAATGGATTGTTTCTACACTTTGTAAAGGT
TTGCTTGTGTGGCGATTTGTTCGAGTTTTGAACCATTAATTTAAGGCATCTTCTTGTGTT
TGAATGCAGTATCTCGGGTTTTGTTTGTTTTGTTCTCTTGTTAGGTGATTTTAGAAATAG
TGTTGCTTCTGCAGGTGATTAACCTGCGTTCCATTGCACTTTTGACTTGGTTTTATTGTC
ATCTATGTCTGAAAGCTGAAAGCTTTGGGTACTTAATCTTCTTGGTAGTAGAGTCTTATC
GGTTATGAAGTGTTTTGTTGATTGGATGCCGGGTATAGAGTTTGTAAGAGCGGAAAGGTG
TGCCAAGGCTTTGCTAGCTTTATGTGACATTAGACACTTTCTTCTTTGCATTTTTCTAAA
ATAAAATAAAATGGAAACAGAAGGCGATGTGAAAAACTTGCTACAATAAATTTGGATTCT
TTCTATTTGGTACCTTATGCTAAGGTTTTGCTTTGGTGGCGATTTGTTCGAATTTTGAAC
CATTAATTTAATGCATCTTCTTGTGTTTAGCTCTCTTTTGGTTCTCTGTTGGCTCATTTA
GAATGCAGCAATCTATAGTATTCCTGATGATAGTATTGCTTCTGCAGGTAATTGATCTTC
TTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCTAAGCAGCGTCACC
ACATCATCGGTCAGTACGTTGTGGGTGAAGGGCTGGTGCAGAATACCGGAAGCAAAGATC
AAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCATTTTC
GAGTTTGCCGTTCCAGTATTGTATTTCATGACTTGAAGAAGCCGTCTTCCCGAAAATAAT
AAGACCTTTTTTCATTTGTATGAGTTTGGTCAAACCTCTCTAAGTTTTATCTGTGACAGT
GTTTGTTGTGCAGATATTGCTATGATTTAACTCTCAAATATAAATTGAATTGGTCTGTTT
GATTTATGATCATTAAACAATCCAAGTTCCTGAAAGTGTATCCCATCTCCTGTCATGTTC
AATATTCAAAGGCTATAAACATCCACTCTCTAGAAACTACACAACCTGATTGGCTAAAGA
TTACAACACACAACACAATCTAAGTCTTTTGGGGATCTCAGAAACCCATTTTCAAGATCT
GCAGTCTTCTGTAAGATGAGAAAGGCCTTTTGCTTTGTGATTCTCTTGGAAGGAGTATAC
CTACCGATTTGAATTGTAAGATTATGTATAGAAGGTGAGTAAAGCACTATCCTTGTGTTT
CACTCTCTTGGCCGGGCAAGCCACAATGAACTAAGAGCACGTAGGCGAGATGAATAATCA
TGTATGGCAAGAAAAGCTCGAGCTGACTGACGCGTTGTTAACACTCTAATCATCTGTTGG
AGTGTTTGCAGCCTCAAGTT
Pro Sequence
MAAPFTLRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVV
APSQLRFAISAQIRNNAHVTDPKVIDLLLFKGMEELTDIVDHAKQRHHII
GQYVVGEGLVQNTGSKDQGKSDFLKNFYTSNYF
mRNA Sequence
AAAACGACGTCGTTGACTGTTTCTCTCTCAAATCGATTAGTTCCTCTCTCATTTTGTCTTCTTTGCTTTC
GTTATCTCAGGAAGAGAAAAAAAAAAAAAATCTCGATTCATCGATCAAACAAGCGTTAGATAGATCAGAT
GGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTCGCCGC
CGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCTCCAAG
ACGTCGTCGCGCCTTCCCAGCTCCGCTTCGCAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACCGA
CCCTAAGGTAATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCTAAG
CAGCGTCACCACATCATCGGTCAGTACGTTGTGGGTGAAGGGCTGGTGCAGAATACCGGAAGCAAAGATC
AAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCATTTTCGAGTTTGCCG
TTCCAGTATTGTATTTCATGACTTGAAGAAGCCGTCTTCCCGAA