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Detail for ZS11_C03G55230.t1

Genome:
ZS11: ZS11_C03G55230.t1
ZS11_v0: BnaC03T0494900ZS
WE: WE_C03G53100.t1
WE_v0: BnaC06T0298000WE
Darmor: C03p57060.1_BnaDAR
BH: BnaC03T521800BH
Quinta: BnaC06T0262700QU
ZS2: BnaC06T268700ZS2
SW: BnaC06T292200SW
Express61: C06p024770.1_BnaEXP
Xiaoyun: BnaC06G0283800XY
P202: BnaC03G067740P202.1
BL: BnaC03T521800BH
TA: BnaC06T272800TA
Da-Ae: Not available
RB: BnaA07T374400RB
No2127: BnaC06T0262200NO
P130: BnaA07G027120P130.1
Length: 80
KOG ID: KOG1223
KOG E-value: 5.030000e-19
KOG Score: 80.9
KOG Annotation: Amino acid transport and metabolism
Biological Process: -
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: RQL90794.1
NR E-value: 3.100000e-24
NR Score: 115.9
NR Annotation: RQL90794.1 hypothetical protein DY000_00016992 [Brassica cretica]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: 2.170000e-18
SwissProt Score: 80.9
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (246 bp)
ATGACCAGCATGGTCGGGAGATTTTCTTCTCCTCTCGCCATTCCTCAACAGGTTTGTGTCTGCAGTGAAG
CTTCCGCTGCAACTAGGCCTCGAGCTGCTTCAACTGCGCGTGATATCGAGATAGAGCCTGTGAGGAAGCT
TGCACGATTGCGGCACCTATATTCTCAATTGGCGGGGAAGCTGAGGAGAGAAGATGACAAGTTTAACATA
TTGGCTGCTCTGCATCGAACTTCAGCTGTTTGA
Upstream Sequence
ATGACCAGCATGGTCGGGAGATTTTCTTCTCCTCTCGCCATTCCTCAACAGGTTTGTGTCTGCAGTGAAG
CTTCCGCTGCAACTAGGCCTCGAGCTGCTTCAACTGCGCGTGATATCGAGATAGAGCCTGTGAGGAAGCT
TGCACGATTGCGGCACCTATATTCTCAATTGGCGGGGAAGCTGAGGAGAGAAGATGACAAGTTTAACATA
TTGGCTGCTCTGCATCGAACTTCAGCTGTTTGA
Downstream Sequence
GTTCCGCTATTCATCCTTTGGAATCTCATTTTTGCTGTAATCTGATCTTTTAAGGCATTC
ATGTAGGGATCCTCATGCCCTGGATTTTTGTCATATATATATCAGAGTTGTTGTGTCAGA
TTTCTTATGTTGTTATGAGGTTACGAAGGGAGTATCTGTTCTTAGAAAGAATCATGTTCC
CACAAAAGGATCGCATTACCCTGCTGTAGACAAGGCTTTGGAGATGATTAAGCAAAAATT
TCATCTCTTAGCAAGGTAGTTTAGTGACCAATGTCCGTCTCTATTCTTGCAGCTTAGCAG
ATGTTTTCTGCTTTAAAAAACAGGTTGTGCTTGCTTGCTCGCAAGAGCAGGATTATAACG
GATATTGATATTGATCCCGTTGCTTGGTTTGCACAGTTACATGTTTGTTTTTTTGACTAA
GGATACTATATTCTTTTTTTTAGAATAAAGCAAGGTTAAGACTTGAATCTCACTCAAGTT
ATTGTTTCACGGAGTGAAGGGCATGATGCTCATAAGTTCTGTCTGTAACTAACTGGTGCA
CAAGCTTTTATCGGGAACACGATATGGTATATAAGTAATCTCTTGGTGCATTCTGTTCGA
TTCACATATCTTGAAGAAATTGTTGTTAAAGATATGTGCACATTGTTTGACATACATTTT
TGTGAAATAACCTGACAGACTTTTCCAAAGGAATCAATTAGGTGTCTGCAGTGAAGCTTC
CGCTGCAACTAGGCCTCGAGCTGCTTCAACTGCGCGTGATATCGAGATAGAGCGTAACTT
ACTAACCATGAGTTTCTTATTCTACTGTTTTGAAGAATCACATAATCACTTTTTTCATTG
AAATTTCCAGATATGCATACTGATTTGGTTTACTAAACTGCTGCAGCCCGAAATATGACG
TTGAGCTCTCTATTATACAAGAGAATATAAGAGACAAGTTAAACTTAACTTCATTCTTAT
TTCTCTGCATCTTCAAACCTTTTGTCTGCAGTTAGTTTCAATTTTACTCTTTAACAATGT
ATTGACACATGTTCTATTATCATATCTTTCTTTCAGTCTATATGTGACAAAAAGCTGTGA
GGAAGCTTGCACGATTGCGGCACCTATATTCTCAATTGGCGGGGAAGCTGAGGAGAGAAG
ATGACAAGGTAAGATAATAGTATTTGAATAATTGTACATAACATGATCATCTAGATAGCT
TGAAGTAAGGGTTGTGAATATTATCACCATTCTTTTCTTTTCTTCACAGTGGGTTTGATT
CTTTTGTGTTTTTATCCACAGTTTAACATATTGGCTGCTCTGCATCGAACTTCAGCTGTT
TGAAGGCTTCCAGCAGAAGAAACAAGACTTTTGATTAAGGAAATATGTGAAATATCAGCT
GTTTGTAATATTTTTTATTTGATGTATTTTTGAGAATTTCCATTTTTTCTTCTATCGATG
TCTCTTCCAGACAGCTAAAATAAAAGTACCAACAAATTTGTAAAGATATATATGAAAAGA
AAATAAAATGTTTAAGAAACTCCATCCTACTGATTATTATAGTAAGAATATAACAAAAAT
TTAAAAATCTACAATAGTTATAATCATGAAAATCTTTTTAATGTTAAAAACTTATAATTT
CTTAATAAATAATAAAATTAGTAAAAATAATGTTAATTCAATTAAAAATATATGAAGATG
CAATGAGAATGTGTTTTCGCTAAAcaaaaataaaacaatgcaaaaggaaaatatagttaa
aataattatCACAAAATATATTTTATACCAAATAAAAATAAAAATGTCAAATATTAAACT
AACAAGATGTAATATCCCGCACGAATCGCGGACAAACCCTTAGTTACACACAGTGATAGA
GCCACATGAGAGGTAGGGGTCAACTGACCCCTATGAAATATAAATATTTTAACATGTAAG
CTTATATCCAGTGTTTTAGCTGTGACAAAATGGCTAAACTATTTTTTTTTGAGTTCAAAA
CTCAGCTATGTTTCTTTTAA
Pro Sequence
MTSMVGRFSSPLAIPQQVCVCSEASAATRPRAASTARDIEIEPVRKLARL
RHLYSQLAGKLRREDDKFNILAALHRTSAV
mRNA Sequence
ATGACCAGCATGGTCGGGAGATTTTCTTCTCCTCTCGCCATTCCTCAACAGGTTTGTGTCTGCAGTGAAG
CTTCCGCTGCAACTAGGCCTCGAGCTGCTTCAACTGCGCGTGATATCGAGATAGAGCCTGTGAGGAAGCT
TGCACGATTGCGGCACCTATATTCTCAATTGGCGGGGAAGCTGAGGAGAGAAGATGACAAGTTTAACATA
TTGGCTGCTCTGCATCGAACTTCAGCTGTTTGA