BrassicaPanDB

CDS Sequence (136 bp)

ATGGGTCAAGTATTTGCTTCATTAGTTCCAACAGTGGTAGCTGCAGAATCCGCTATTGGATTAGCCTTTT
TTGTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGgATAA

Upstream Sequence

ATGGGTCAAGTATTTGCTTCATTAGTTCCAACAGTGGTAGCTGCAGAATCCGCTATTGGATTAGCCTTTT
TTGTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGgATAA

Downstream Sequence

TCTAAAATTATAGTAAAAAAATGTTCTAACATGATATATATATGtatagagtaaattata
tttttggtaaatcatagtctaataaatcagacaaaaatatttttaaaaatacagtaactt
tctctaacatacaataaattaattatatataaggaagccattattaaaactattctaaat
ttaataagtgaattttattttagaaaacctaataagttattgggataatatttttattaa
gtccttaaatataataatatataaaatattcagtcatatattatttaaatattgaCAATT
AAAATTATGTTTTGATTCTCTTTTTTTAACAAATAATTTCCAATTATACTGAATTATATA
TTCATGTTCAATTATTAAAATATGTAAAATAAacaaaaatacaggtacattcgatatata
caaaatataaaataaacaatgttttgagtattaaactttaccacaacaataaaagcaaAT
CTACTTACTATATATAAAATTTTGAGCAAACATTTAGGAAAATGTATACCATTTTAATCA
TGACAATCGTGTCATGCTAATATAAACTTTTAATCTCTAATAAAACTAATAAAAAATATA
TACTAATTAGGTTTAGTTTGATATATGCGAAGATGATATAAAAATGGGTTTTCATTATAA
AAACATTGCAAAAAATAAAAATAATAACTAAAATAGTATAATGTCATAAAATATATTTGA
CAACAAATAAAAAAACAAAAACAAGTTAGAAAAATAAACAAACATCAAACAAATGTTAAG
TAAATAAACATAATACCCCTCATCACTTAAAATTTTCTACAAGACAAAAATCATTATTAT
ACACATCTCTTGCAAATGAAAATCTAAAACACAaaccataaaatcatagaaaaataaaaa
tctagatAACAAATAAAATATATCCCGCCCGTAGGGCGGACCAACCCTAGTATATCTTCT
TATACAGTAAAACAGGCTTGTGTCTCTCCTCATTAAGCCACATCAGCAGGGAGATAGGAG
CTTGTTGCGACACGTCAGCATTCTCTTCCTGTAATATCACGAGTTCAATGGGCCACGCTT
AGGTTGGTGTTTAGATGATAAAAGCCCAATGTAACATTTCTCCTTCTCGACGGTGGTCAT
CTGCTTGATACTCCTAAACTCCACCGGCTTTGACGTAACTGAGGCGTAACGTTGTAACGT
TTTTTATATTCATTGAAACTAGCATTAAGATTCACCTTTAACTCTCTTATTAAAGCTCTT
CCACGGGGTCGATTTAAGTTACTCTGTTAATTTGCTTCCTATAGATCGTTCGCTTTGCTT
TCGTGATTAGATTCTGATGATCGATTGATTTGATTGATTTGCAGAAATGAAATAAGCGTA
AATCAAGATCACACACAAGATTTGTTAACCCGGACTTCGTTTCCTACTGTCCGGGGAGGG
AGCTTCGCCCTCAACGATTCACTAAAGCCAATATAGAGTTCCGGTAACAGTTACACAGCT
GATATCTCAACACAACAGAGAAGATACAGTTTCGTTACCTCCGAAATACACTCAAGGTAA
TCGGAACCTTCTATACGACGTCACCGGAGCTACTCCTGCTCCAGTCTCTGATCAATCGCA
CAAGGTAGATTTCTCTTCTGCGAATCGCTCTCTCCAGTCTCAGTTTCAGGATGATCGCAT
GACGAAGATAAAGTGGTCGTTAGGCCGTTAGACCTTTTGTCATCACGTGACCTGACTTGG
GCTTCTCATCTCATATTCAAGCCCAGCTCGTCGGCCCATTAGAAGAAGTCAGAAGTCCTC
AAAGGCAAAGCCCACAAATCTCCACCTCTTTTGACTTCAGACATGTCGACGAGACCCTAA
CACTGTCGATCTCTTCTCTCTTGTCGCCGATTAACCTCAATCCTATCTCCTCCTGTCATC
GATATTCTTAGACCTCGATCGTCAATCAGCTTCTCCATCATCTCTTCTGAAACTGACCCG
AAACAGCTCTCTCTTCAAAA

Pro Sequence

MGQVFASLVPTVVAAESAIGLAFFVITFRVQETFVVKFINSIQG

mRNA Sequence

ATGGGTCAAGTATTTGCTTCATTAGTTCCAACAGTGGTAGCTGCAGAATCCGCTATTGGATTAGCCTTTT
TTGTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGgATAA

Genome:
ZS11:	ZS11_C03G55470.t1
ZS11_v0:	BnaA10T0078100ZS
WE:	WE_C03G53320.t1
WE_v0:	BnaA10T0076800WE
Darmor:	C01p34800.1_BnaDAR
BH:	BnaC03T524400BH
Quinta:	BnaA04T0074500QU
ZS2:	BnaC03T492200ZS2
SW:	BnaC03T511000SW
Express61:	Not available
Xiaoyun:	BnaA04G0084100XY
P202:	Not available
BL:	BnaC03T524400BH
TA:	BnaC03T495700TA
Da-Ae:	Not available
RB:	BnaC03T523500RB
No2127:	BnaC01T0200600NO
P130:	Not available
Length:	44
KOG ID:	KOG4669
KOG E-value:	1.660000e-18
KOG Score:	72.4
KOG Annotation:	Energy production and conversion
Biological Process:	GO:0042773(ATP synthesis coupled electron transport)
Cellular Component:	-
Molecular Function:	GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog:	K03882 ND4L; NADH-ubiquinone oxidoreductase chain 4L [EC:7.1.1.2]
NR Protein:	ESQ50970.1
NR E-value:	8.100000e-11
NR Score:	70.5
NR Annotation:	ESQ50970.1 hypothetical protein EUTSA_v10023053mg [Eutrema salsugineum]
SwissProt Protein:	Q04614\|NU4LM_ARATH
SwissProt E-value:	2.430000e-15
SwissProt Score:	65.9
SwissProt Annotation:	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=2 SV=2

DETAIL

Detail for ZS11_C03G55470.t1

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