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Detail for ZS11_C03G77800.t1

Genome:
ZS11: ZS11_C03G77800.t1
ZS11_v0: BnaC03T0684500ZS
WE: WE_C03G76170.t1
WE_v0: BnaC03T0592800WE
Darmor: C03p78920.1_BnaDAR
BH: BnaC03T707700BH
Quinta: BnaC02T0310600QU
ZS2: BnaC03T673300ZS2
SW: BnaC03T695900SW
Express61: C03p057440.1_BnaEXP
Xiaoyun: BnaC03G0686300XY
P202: BnaC03G100630P202.1
BL: BnaC03T707700BH
TA: BnaC03T669600TA
Da-Ae: Not available
RB: BnaC03T710000RB
No2127: BnaC03T0595400NO
P130: BnaC03G075110P130.4
Length: 157
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016655(oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor)
KEGG Ortholog: -
NR Protein: XP_013685554.1
NR E-value: 4.400000e-83
NR Score: 312.4
NR Annotation: XP_013685554.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Brassica napus]
SwissProt Protein: Q2V2S7|NDHM_ARATH
SwissProt E-value: 2.950000e-85
SwissProt Score: 251.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1
CDS Sequence (480 bp)
ATGGCTGCAGCATTCTCTTACACTGCCTGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGGTCAAA
TCCGACCAATTAGAACATCACAAAAGGCTTTCGTGGTGACAAACCCTGAACAAGACAACACATTCCAGGA
ACAAGGAATAGATACAATCAAAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTG
AGACCAGTGGAGAAACAGACTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGGTGAGTGGCTAA
GCAGTGTGACACGCCACGTCAGGATATACGCTGCTTATATCGATCCAGAGACTTGTGAGTTTGACCAGAC
GCAGATAGATAAACTCACTTTGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAGAGCTGTAAC
AAGGTTTATTCTTACTTCCAGGAACTAGTCGATCACTATGAGGATCGGATGTAG
Upstream Sequence
AAGCTGTGGCCATTTCTCAACCTCATCAAATCTCTTTACAGAACATGGTTCTGTTACCAGATAACATCTC
ACAACATAAACTCTCTTCTTCTTTTTTCACATTTTTCAGACAAGAAAAAAATGGCTGCAGCATTCTCTTA
CACTGCCTGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGGTCAAATCCGACCAATTAGAACATCA
CAAAAGGCTTTCGTGGTGACAAACCCTGAACAAGACAACACATTCCAGGAACAAGGAATAGATACAATCA
AAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTGAGACCAGTGGAGAAACAGAC
TAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTC
AGGATATACGCTGCTTATATCGATCCAGAGACTTGTGAGTTTGACCAGACGCAGATAGATAAACTCACTT
TGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAGAGCTGTAACAAGGTTTATTCTTACTTCCA
GGAACTAGTCGATCACTATGAGGATCGGATGTAG
Downstream Sequence
GTAACAATATCATCTATATAGTACACTCAAGAAGACACTATAAAAAAAAAGAAAAGAAGA
AGACACTATAtatatatatatatatcatttgcttaaacattttagattgatactcagtca
cttcgttttttATTAGATGACATTTTAGAAATAAGCATGAGAATTAAAAAATGATTTCAT
TTTACGTTTTTAAAACATTATTAATTATTTACGTAACCATAATTAAAAAAATAATATAAC
AATCTGCGTAATACaaaagtcatataattcaaaaaactaataaatttacattggaaaatg
aatattttttataaagaaatttattttaaggcataaagagatagttagaagagctagact
tttgttgttctttgacaggagcaccattgaCAGAGTATACACTAAGATTGATAGGATCGG
ATGTAGAGCATTACATAAGGAAGATGTTGTTTGATGGAGAGATACAATACAACATGGATG
CAAGAGTTCTTAATTTCAGTATGGGCAAGCCTCGTGTTCAATTCAACACCAGCAACATTG
AAGGTGGTGGAGATGGCCAGCCTCAAAAAGATGCATAGTGAAAACAACTCTATACCAAAA
CTATGGAAAAAGAAGAGAGATATCAAAACAATATGATCTTTTGTATATGGGTTTATGAAA
TGCTTTTTCATTTTCTCATGCTACAAGTAACATATGTATATACATATATTATGATATTGT
CATATGCTATGTTTTAACTTTTAATTATCAATCCGCATAAGTTCATAACCATGAAATTAT
TTTAGAATCGTAACAAATCATAATCACAACTAAATATGTTGGAGAAAATCATAATTGAAA
TTGGGCTATGATGTCAATAAGCCCACACAAGGCCCAGACAATGACTTGTAGCCCACGGGG
CTTTTCCTATAAATGGTTAAACCCTACACGTTGTGCGTGTCCCATCTCCGAGCTTTAAAC
CCTTCTTTCTCCACCGACTCTCTCTCCAACCAAAAATGGCATCCGTCGCGCTTCTACGTG
CTCTTCGCCGCCGCGAACTCCACACAGCTTCCGTCTCCGCGTTTAAATCCGTATGTATCT
TTTCCCTCGATCTCCATTTCTAGCTTGAGAAATCACGTTTTAGTTTTCTAGATCTGTGAA
CCGGTAATACTACTTGGAAATGAATTAGGGTTTGAAATTATCCAATGGGTTGAATCGATT
TCTCATAAAGTTTCGTACTTTGCTTCGTCTGTGAAGTGGATCTAATATAAGTTGAAAGCT
TACACTTTTTAGTATTGAATCTGTAGGTTTCTACAAATGGAAAGACGTCTTTGATTGGGA
AGTTAGGTCACTTCGCAAGGCCTTTCTGGTATAACTTCAAGCTCTCTTGAACATGAATCT
GTCTCCCTTGTAATGTTTTTTTTTACTTATTTGTTCTGTTGATCCAGCTCGAGGCCTGTG
GGGAATGATGTTATCGGTATTGATTTGGGTACCACCAACTCTTGTGTAGCTGTCATGGAA
GGAAAGGTATTGACTTTGATCTTGATGTGATTGTTTGAATAAAGGCAAGTTATTGACTTT
GATCTCGTTTTTTTTTTTAACAGACTCCTAGAGTCATTGAGAACGCTGAAGGAACACGAA
CCACACCATCAGTGGTTGCTATCAACCAGAAGGGCGAGCTTCTCGTTGGAACACCAGCTA
AGCGTCAGGCTGTCACCAACCCAACCAACACCATCTTCGGGAGCAAGCGTTTGATCGGGA
GACGTTTCGACGATTCCCAGACGCAGAAGGAGATGAAAATGGTCCCTTACAAGATCGTCA
AGGCGCCGAACGGTGACGCTTGGGTTGAAGCGAATGGTCAGAAGTTTTCTCCAAGTCAGA
TTGGAGCTAATGTTTTGACCAAAATGAAGGAGACAGCTGAAGCTTACCTCGGGAAGAGCA
TTACCAAAGCTGTTGTGACTGTTCCAGCTTACTTCAACGACGCGCAGAGACAGGCCACGA
AGGATGCTGGGAAGATCGCT
Pro Sequence
MAAAFSYTACPKFSLLQPPMAGQIRPIRTSQKAFVVTNPEQDNTFQEQGI
DTIKEEQPAEQQMKKQPTPLRPVEKQTNVKSTGLPREFGGEWLSSVTRHV
RIYAAYIDPETCEFDQTQIDKLTLILDPTEEFVWEDESCNKVYSYFQELV
DHYEDRM
mRNA Sequence
AAGCTGTGGCCATTTCTCAACCTCATCAAATCTCTTTACAGAACATGGTTCTGTTACCAGATAACATCTC
ACAACATAAACTCTCTTCTTCTTTTTTCACATTTTTCAGACAAGAAAAAAATGGCTGCAGCATTCTCTTA
CACTGCCTGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGGTCAAATCCGACCAATTAGAACATCA
CAAAAGGCTTTCGTGGTGACAAACCCTGAACAAGACAACACATTCCAGGAACAAGGAATAGATACAATCA
AAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTGAGACCAGTGGAGAAACAGAC
TAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGGTGAGTGGCTAAGCAGTGTGACACGCCACGTC
AGGATATACGCTGCTTATATCGATCCAGAGACTTGTGAGTTTGACCAGACGCAGATAGATAAACTCACTT
TGATTCTTGATCCAACTGAAGAGTTTGTGTGGGAAGATGAGAGCTGTAACAAGGTTTATTCTTACTTCCA
GGAACTAGTCGATCACTATGAGGATCGGATGTAG