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Detail for ZS11_C04G04430.t1

Genome:
ZS11: ZS11_C04G04430.t1
ZS11_v0: BnaC04T0051300ZS
WE: WE_C04G05860.t1
WE_v0: BnaC04T0050800WE
Darmor: C04p05420.1_BnaDAR
BH: BnaC04T053200BH
Quinta: BnaC04T0050100QU
ZS2: BnaC04T050100ZS2
SW: BnaC04T051400SW
Express61: C04p004920.1_BnaEXP
Xiaoyun: BnaC04G0050900XY
P202: BnaA05G004560P202.2
BL: BnaC04T053200BH
TA: BnaA05T045600TA
Da-Ae: Not available
RB: BnaC04T048200RB
No2127: BnaC04T0049800NO
P130: BnaC04G005630P130.1
Length: 170
KOG ID: KOG3363
KOG E-value: 1.580000e-117
KOG Score: 330.0
KOG Annotation: Function unknown
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
NR Protein: XP_013692802.1
NR E-value: 4.700000e-91
NR Score: 339.0
NR Annotation: XP_013692802.1 uncharacterized protein LOC106396848 [Brassica napus]
SwissProt Protein: Q6DFN1|NDUF3_XENTR
SwissProt E-value: 4.650000e-17
SwissProt Score: 77.4
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1
CDS Sequence (520 bp)
ATGGCTACGAGGCTGAAATCGATGGCGACTTTGCCAAAACTGATTCAAACCATGAGAAACGAAGCTCCTA
AGCATTCGAACCCTGTTTTGCCATCTCTGAGACGAGCTTTCTCCCTCTACGACCAGATCAATCTCATTGA
CAATGTCCCCGAAGACCAGCTCCGCTTCCAAGAGTTTAATGAGACGAGCTTCACGGTGAATGGAGTCAAA
TACGAAGGTAGCTTGCTCTGTGTTGGGAACTTGCTTATGTCGTGGACCCCTCGTCAATTCTCCGACATCA
CCCCTGATAGCTTGTCTATCTTCCAGACGGTTCGACCCATTCCAGAGCTCTTAATTGTTGGTTGTGGAAG
AAACATTCACCCGGTAACTCCCGAGCTCCGTCAGTTTGTCAAGTCTATTGGCATGAAGCTAGAAACCGTT
GATTCTAGAAACGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTGCTGCTGCATTGC
TTCCATATGGAGTTTCATCTTAA
Upstream Sequence
ATGGCTACGAGGCTGAAATCGATGGCGACTTTGCCAAAACTGATTCAAACCATGAGAAACGAAGCTCCTA
AGCATTCGAACCCTGTTTTGCCATCTCTGAGACGAGCTTTCTCCCTCTACGACCAGATCAATCTCATTGA
CAATGTCCCCGAAGACCAGCTCCGCTTCCAAGAGTTTAATGAGACGAGCTTCACGGTGAATGGAGTCAAA
TACGAAGGTAGCTTGCTCTGTGTTGGGAACTTGCTTATGTCGTGGACCCCTCGTCAATTCTCCGACATCA
CCCCTGATAGCTTGTCTATCTTCCAGACGGTTCGACCCATTCCAGAGCTCTTAATTGTTGGTTGTGGAAG
AAACATTCACCCGGTAACTCCCGAGCTCCGTCAGTTTGTCAAGTCTATTGGCATGAAGCTAGAAACCGTT
GATTCTAGAAACGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTGCTGCTGCATTGC
TTCCATATGGAGTTTCATCTTAAAGAATTTTCTAGCAACTCGAGCTCGGTCTGTATAACTGTAGATGAAT
GTTTGAGACTTTATCTCTTGTGAAAATAAACCGAAACACATCGGATTTTTCTTGCTTCTCGAGGTTAATA
ACAGACGTTGTAACAAACATGAACCTTTTCATTGCATTTCTCACCTTTCTATATATCTCGGAGTTT
Downstream Sequence
GTAATCTATCCCAATTCGAAAGCATCTCCCTTCTTGGGTTTCTCAGTGAATGATCTTGTG
TTGGTTTGGTTTGTGTAGGTTTAATGAGACGAGCTTCACGGTGAATGGAGTCAAATACGA
AGGTAGCTTGCTCTGTGTTGGGAACTTGCTTATGTCGTGGACCCCTCGTCAATTCTCCGA
CATCACCCCTGATAGGTAGGCAAAAGGTTGAGACTTTAAGCTATCTAGATACCTGGTCGT
TGGTTTCTCTGTCTTGGAGTCTAACCAAATGTTATGTCACAACCTGATGTTGCTTTTTTT
TAACTGTTTTGAGTGAACGTTATGTGCTTTTGATGTTCATTTTCATCAAAGTGGTTTGAA
AGGTCGATTTTGATGTGTTTGATCAAACGTTTGGTTTAGTATATGTTTAATTGAGAGGTT
GTGGTATATGTTTGATAAGCAAGTGGCTTAACGTCTCTACATTTCTTTTTTCATGGATGC
AGCTTGTCTATCTTCCAGACGGTTCGACCCATTCCAGGTGATAATACATCAAATACTATT
TGTTTCGTTGTCAATTTGTACAACAAAGAAACTGAATGATAACATATGAAAAATGTAGTC
GCATTGCCATTGGTTAATCAACTAGATTTTTGCATATTAGCATCAACGTCAGGACTTATT
ATATATGTATTCTGTTGAGCTGTGTTTTTTTTTTTTTTTCATTTCAGAGCTCTTAATTGT
TGGTTGTGGAAGAAACATTCACCCGGTAACTCCCGAGCTCCGTCAGTTTGTCAAGTCTAT
TGGCATGAAGCTAGAAACCGTTGATTCTGTATGTTTTCTTCTACTCCCTTACATCATTCT
CTAGTCCCACACAAGCCTAATTCTTATATTGATTACTTGATTCAGAGAAACGCTGCATCA
ACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTGCTGCTGCATTGCTTCCATATGGA
GTTTCATCTTAAAGAATTTTCTAGCAACTCGAGCTCGGTCTGTATAACTGTAGATGAATG
TTTGAGACTTTATCTCTTGTGAAAATAAACCGAAACACATCGGATTTTTCTTGCTTCTCG
AGGTTAATAACAGACGTTGTAACAAACATGAACCTTTTCATTGCATTTCTCACCTTTCTA
TATATCTCGGAGTTTGCTTATGTGATGACTTTTATGGCGCAATAGGTCTAACACAATAAA
AGAAAtGTCcACAACCTTTTTAAAATATaattcattcgtttcaaaataattcacgttttc
caaaaaaatgtttaaaaaaaaacagttttatatttttaatatattctgtaaactttgaaa
aagttaactgcgtgttaaatttttattgattaaaatttgcgaaagatagtaaatcacaaa
aatatattatatttaTAATTAAATTTAATGTTTTACTAATGTGTGTAAACATTAACCATT
TTGAAACAAAAGGAATAAATGATGTTAACATGGGATTCCGACAATACTAATATAAAGCAC
ATTTCGGAATATTTAAAATTATTTTATTATATCAAGCCACAAAGTTACATATTTTCCACA
TAAAATCTATGTAAACGATCACAACCTATGACTTTTACTATGATACATAACAAAATAGAG
AAAGATCAAGCAACGGCGGCCAAAACACCAACAAATGGAGCAACTGTGACGATCACAGGC
TCACTTTGCTGAAAATTAGTCCTCGCATCTCCATAAGCATCGTTCTCGTCGGGTCCTCCC
ACGAGTGCTCCGGTTAGTACGTTAGGGTTTGGTGCAGGATTGTTATACCATTTGTTCATT
CCGTCATTGCACGTCACGGCGGTGCTGTTCTGTTTGATCGACACTATAGAGGCTGCTCTA
TGGTGTGGACTCTTTGGATAGTTGGTTCCGAATCCAACCATGTAGCTCATGCTCGTCGGG
TTTGATCCAAGTATGTAGTCTACCTATATAAACCAATATTATCGTGTGTAAATTGTTAGG
CAATAAATATCGTTCGTGGT
Pro Sequence
MATRLKSMATLPKLIQTMRNEAPKHSNPVLPSLRRAFSLYDQINLIDNVP
EDQLRFQEFNETSFTVNGVKYEGSLLCVGNLLMSWTPRQFSDITPDSLSI
FQTVRPIPELLIVGCGRNIHPVTPELRQFVKSIGMKLETVDSRNAASTYN
ILNEEGRVVAAALLPYGVSS
mRNA Sequence
ATGGCTACGAGGCTGAAATCGATGGCGACTTTGCCAAAACTGATTCAAACCATGAGAAACGAAGCTCCTA
AGCATTCGAACCCTGTTTTGCCATCTCTGAGACGAGCTTTCTCCCTCTACGACCAGATCAATCTCATTGA
CAATGTCCCCGAAGACCAGCTCCGCTTCCAAGAGTTTAATGAGACGAGCTTCACGGTGAATGGAGTCAAA
TACGAAGGTAGCTTGCTCTGTGTTGGGAACTTGCTTATGTCGTGGACCCCTCGTCAATTCTCCGACATCA
CCCCTGATAGCTTGTCTATCTTCCAGACGGTTCGACCCATTCCAGAGCTCTTAATTGTTGGTTGTGGAAG
AAACATTCACCCGGTAACTCCCGAGCTCCGTCAGTTTGTCAAGTCTATTGGCATGAAGCTAGAAACCGTT
GATTCTAGAAACGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTGCTGCTGCATTGC
TTCCATATGGAGTTTCATCTTAAAGAATTTTCTAGCAACTCGAGCTCGGTCTGTATAACTGTAGATGAAT
GTTTGAGACTTTATCTCTTGTGAAAATAAACCGAAACACATCGGATTTTTCTTGCTTCTCGAGGTTAATA
ACAGACGTTGTAACAAACATGAACCTTTTCATTGCATTTCTCACCTTTCTATATATCTCGGAGTTT