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Detail for ZS11_C04G08490.t1

Genome:
ZS11: ZS11_C04G08490.t1
ZS11_v0: BnaC04T0085100ZS
WE: WE_C04G09970.t1
WE_v0: BnaC04T0086000WE
Darmor: C04p09610.1_BnaDAR
BH: BnaC04T089600BH
Quinta: BnaC04T0085500QU
ZS2: BnaC04T086400ZS2
SW: BnaC04T088300SW
Express61: C04p010150.1_BnaEXP
Xiaoyun: BnaC04G0088000XY
P202: BnaC04G005890P202.2
BL: BnaC04T089600BH
TA: BnaC04T089100TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA05T080700RB
No2127: BnaC04T0085400NO
P130: BnaC04G009470P130.1
Length: 558
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1098.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0052716(hydroquinone:oxygen oxidoreductase activity),GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013748375.1
NR E-value: Not available
NR Score: 1113.2
NR Annotation: XP_013748375.1 laccase-4-like [Brassica napus]
SwissProt Protein: O80434|LAC4_ARATH
SwissProt E-value: Not available
SwissProt Score: 1103.0
SwissProt Annotation: Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2
CDS Sequence (1700 bp)
ATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTTCTTGTCTGTGTTCCCAGCTCCATCGGAGA
GCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAACATTACTAGACTATGCTCAAGCAAGCCAAC
CGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAA
GTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCACGGTGTGAGACAAGTGAGAACGGGGTGGG
CCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCAGGTCAAGTCTACACATACAACTACACCTT
GACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCCTCTGGCTTCGAGCCACGGTTCACGGCGCA
ATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTTATCGTTC
TAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTGGATTAGCCTCTAA
TGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATCTCAGGGTTACAAA
CTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAATGAAGAGCTCTTTT
TTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTCGACGCCGTCTACGTCAAACCGTTCAAGACCGA
CACCATCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAAATCTGCCGGCAAATAC
CTTGTAACAGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGACAATGTTACCGCCACCGCCACTGTTC
ATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACTCTCCCTCCGCCGCAAAACGCTACTACCAT
CGCCAACAACTTTACAAACTCTCTTCGTAGTCTCAACTCTAAGAAGTACCCTGCCTTAGTCCCGACCACC
ATCGACCACCACCTCTTTTTCACCGTCGGCCTCGGATTAAACCCGTGTCCCACTTGTAAGGCTGGAAACG
GAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACTATGCCCAAAACCGCTTTGCTTCCAGCTCA
TTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCAAGAACCCACCGCATGTTTTCAACTACAGC
GGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAGGCTTTACAAGCTACCTTACAACGCCACGG
TGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAGAACCATCCTATTCATCTACATGGCTTTAA
CTTCTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCAAGAAAGATCCAAGCAACTTCAATTTGGTC
GATCCTGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGGATGGGTTGTCATCAGATTCAGAGCGGATA
ATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTTCTT
GGTGGAGAACGGCAAAGGACCAAATCAGTCGATTTTGCCACCGCCTAAGGATCTTCCCAAGTGTTAG
Upstream Sequence
GTTGCCTCCTTCTCTCGTTTCTAAACTCTTTCTCCTCTCTCTTTTATAAGCTTGCGTTGGCCAGTCGCTC
ATCTCAAACACAAAGACAAGAATATTAAACACACAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGAA
AGGACGAAAGAAACTGAGGAGAGATAGATATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTT
CTTGTCTGTGTTCCCAGCTCCATCGGAGAGCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAAC
ATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACG
CACGAGAAGACGACACGTTGCTCATCAAAGTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCA
CGGTGTGAGACAAGTGAGAACGGGGTGGGCCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCA
GGTCAAGTCTACACATACAACTACACCTTGACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCC
TCTGGCTTCGAGCCACGGTTCACGGCGCAATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCC
CAAACCCGACCACGAGAAAGTTATCGTTCTAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAAC
GAGGCGCTTAAGTCTGGATTAGCCTCTAATGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCG
TAAATAATTGTCCATCTCAGGGTTACAAACTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGT
CAATGCTGCACTTAATGAAGAGCTCTTTTTTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTCGAC
GCCGTCTACGTCAAACCGTTCAAGACCGACACCATCCTTATAGCACCCGGTCAAACCACCAACGTCCTCC
TAACCACCTCAAAATCTGCCGGCAAATACCTTGTAACAGCTTCTCCCTTCATGGACTCCCCCATCGCGGT
GGACAATGTTACCGCCACCGCCACTGTTCATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACT
CTCCCTCCGCCGCAAAACGCTACTACCATCGCCAACAACTTTACAAACTCTCTTCGTAGTCTCAACTCTA
AGAAGTACCCTGCCTTAGTCCCGACCACCATCGACCACCACCTCTTTTTCACCGTCGGCCTCGGATTAAA
CCCGTGTCCCACTTGTAAGGCTGGAAACGGAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACT
ATGCCCAAAACCGCTTTGCTTCCAGCTCATTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCA
AGAACCCACCGCATGTTTTCAACTACAGCGGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAG
GCTTTACAAGCTACCTTACAACGCCACGGTGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAG
AACCATCCTATTCATCTACATGGCTTTAACTTCTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCA
AGAAAGATCCAAGCAACTTCAATTTGGTCGATCCTGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGG
ATGGGTTGTCATCAGATTCAGAGCGGATAATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACAC
ACGACGTGGGGATTAAAGATGGCTTTCTTGGTGGAGAACGGCAAAGGACCAAATCAGTCGATTTTGCCAC
CGCCTAAGGATCTTCCCAAGTGTTAGATTCTTCAACTAAACAAGGGCACGTTTAAGAAGACCAGCGAGTG
GTGAATTAATGCGTGGATTTGGTTAGCAAATTATATTTTTTGAGCAAAGTTAAAGGTTCGATTTTTTTgc
tcaagcaaatttgaataaaagaggaaggaaaagaaattgtattataacaatattattttttaatcattat
atccaaaatccatttatatattattattctctccaacac
Downstream Sequence
CGTGAGTTTATATCTATCCACTTGCATAGATGTATATTTACATACATATTATGTGTTCGT
GTACGTGCCATGCCGATCTCTTACGCTACATAGGAAGTAGTCGCAAGCTGTCCCATATAT
ATATGCACACTCGTTATCGGTACTTACTTATACGCATAAGTTATATTTCGTACATGCTTA
CGTAGTGATATATATGGTTTATGGCTTCACATAATTAGAACATATATATGTAATTTGTAC
TGATGTCAAAAAAAAAAGTAATTTGTACTTCATGTAGGATATTTAGACCTTAATTTTCTG
TAAATATATTTTTATTTCTTATGAGCCTTTTACTGGCACACATTACCATTTCAAAGTTAT
GTACGTCAGGTGTTTTCTCCTTTTTAAACATGACAATCATTTTATATAAAAGGGCTATAT
AATGTTTTGACGTACATGCGAATGAAGTGAAGTATGTTTTTATCTATTTTTGGTTACAAC
TTACAGTCAGATAATGATTATAGTTATTGTTTTGCTTTTCTTTTATTTACCTTTTTCCCT
TTTGCCTAACTTTGCAATATAATTATTACTGATTAAATTTGTGTTTGAAAATCACACAGG
TTGTGATGAAAAACATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGAACGGTA
GATATCCAGGTCCCACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAAGTCGTTA
ATCACGTCAAGTACAACGTCTCCATCCACTGGTAATTAACCTCCTACTTAATCTTCAAAT
GAATCATCATTGGTAAGTTTATTAGTTAATTGATTGGTGACTGTGGACAACCGAGAACAG
GCACGGTGTGAGACAAGTGAGAACGGGGTGGGCCGATGGGCCAGCTTACATCACCCAGTG
CCCACTCCAGCCAGGTCAAGTCTACACATACAACTACACCTTGACCGGCCAACGCGGGAC
TCTCTGGTGGCACGCTCACATCCTCTGGCTTCGAGCCACGGTTCACGGCGCAATTGTTAT
CCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTTATCGT
TCTAGGTAGCTTAATCATTCTATTTTAGAAAGTTCGGATATATTGAATCTAATTCTCATG
TGGCTTGCACTTCACCGTGTTAATTAAAAACCTATAAAGCTGAATGCGGTTATCTTTTGT
GGCAATGAATATATGTTAATTTGGCATGACTAACTAATGCTCATCATTTATGGCAGCTGA
ATGGTGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTGGATTAGCCTC
TAATGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATC
TCAGGGTAATTAATTTCTTAGTTACCATTATAAATTTTTTTAGTAATACTAATAGTTACC
AAAAAGCTGATTATGAAACCCTCATTTTGCTCTGGAAGGTTACAAACTGTCAGTAACAAA
TGGCAAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAATGAAGAGCTCTTTTTTAA
AGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTCGACGCCGTCTACGTCAAACCGTTCAA
GACCGACACCATCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAA
ATCTGCCGGCAAATACCTTGTAACAGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGA
CAATGTTACCGCCACCGCCACTGTTCATTACTCCGGAACACTATCCTCCTCCCCAACAAC
ACTCACTCTCCCTCCGCCGCAAAACGCTACTACCATCGCCAACAACTTTACAAACTCTCT
TCGTAGTCTCAACTCTAAGAAGTACCCTGCCTTAGTCCCGACCACCATCGACCACCACCT
CTTTTTCACCGTCGGCCTCGGATTAAACCCGTGTCCCACTTGTAAGGCTGGAAACGGAAG
CCGTGTGGTGGCCAGCATCA
Pro Sequence
MKSHMVWFLFLVSFLSVFPAPSESMVRHYKFNVVMKNITRLCSSKPTVTV
NGRYPGPTIYAREDDTLLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYI
TQCPLQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVHGAIVILPKRGVP
YPFPKPDHEKVIVLAEWWKSDTENVINEALKSGLASNVSDAHMINGHSGP
VNNCPSQGYKLSVTNGKTYLLRLVNAALNEELFFKVAGHLFTVVEVDAVY
VKPFKTDTILIAPGQTTNVLLTTSKSAGKYLVTASPFMDSPIAVDNVTAT
ATVHYSGTLSSSPTTLTLPPPQNATTIANNFTNSLRSLNSKKYPALVPTT
IDHHLFFTVGLGLNPCPTCKAGNGSRVVASINNVTFTMPKTALLPAHYFN
ISGVFTTDFPKNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQD
TGVIAPENHPIHLHGFNFFEVGRGLGNFNAKKDPSNFNLVDPVERNTIGV
PSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILP
PPKDLPKC
mRNA Sequence
GTTGCCTCCTTCTCTCGTTTCTAAACTCTTTCTCCTCTCTCTTTTATAAGCTTGCGTTGGCCAGTCGCTC
ATCTCAAACACAAAGACAAGAATATTAAACACACAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGAA
AGGACGAAAGAAACTGAGGAGAGATAGATATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTT
CTTGTCTGTGTTCCCAGCTCCATCGGAGAGCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAAC
ATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACG
CACGAGAAGACGACACGTTGCTCATCAAAGTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCA
CGGTGTGAGACAAGTGAGAACGGGGTGGGCCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCA
GGTCAAGTCTACACATACAACTACACCTTGACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCC
TCTGGCTTCGAGCCACGGTTCACGGCGCAATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCC
CAAACCCGACCACGAGAAAGTTATCGTTCTAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAAC
GAGGCGCTTAAGTCTGGATTAGCCTCTAATGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCG
TAAATAATTGTCCATCTCAGGGTTACAAACTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGT
CAATGCTGCACTTAATGAAGAGCTCTTTTTTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTCGAC
GCCGTCTACGTCAAACCGTTCAAGACCGACACCATCCTTATAGCACCCGGTCAAACCACCAACGTCCTCC
TAACCACCTCAAAATCTGCCGGCAAATACCTTGTAACAGCTTCTCCCTTCATGGACTCCCCCATCGCGGT
GGACAATGTTACCGCCACCGCCACTGTTCATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACT
CTCCCTCCGCCGCAAAACGCTACTACCATCGCCAACAACTTTACAAACTCTCTTCGTAGTCTCAACTCTA
AGAAGTACCCTGCCTTAGTCCCGACCACCATCGACCACCACCTCTTTTTCACCGTCGGCCTCGGATTAAA
CCCGTGTCCCACTTGTAAGGCTGGAAACGGAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACT
ATGCCCAAAACCGCTTTGCTTCCAGCTCATTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCA
AGAACCCACCGCATGTTTTCAACTACAGCGGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAG
GCTTTACAAGCTACCTTACAACGCCACGGTGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAG
AACCATCCTATTCATCTACATGGCTTTAACTTCTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCA
AGAAAGATCCAAGCAACTTCAATTTGGTCGATCCTGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGG
ATGGGTTGTCATCAGATTCAGAGCGGATAATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACAC
ACGACGTGGGGATTAAAGATGGCTTTCTTGGTGGAGAACGGCAAAGGACCAAATCAGTCGATTTTGCCAC
CGCCTAAGGATCTTCCCAAGTGTTAGATTCTTCAACTAAACAAGGGCACGTTTAAGAAGACCAGCGAGTG
GTGAATTAATGCGTGGATTTGGTTAGCAAATTATATTTTTTGAGCAAAGTTAAAGGTTCGATTTTTTTgc
tcaagcaaatttgaataaaagaggaaggaaaagaaattgtattataacaatattattttttaatcattat
atccaaaatccatttatatattattattctctccaacac