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Detail for ZS11_C04G21220.t1

Genome:
ZS11: ZS11_C04G21220.t1
ZS11_v0: BnaC04T0192500ZS
WE: WE_C04G22900.t1
WE_v0: BnaC04T0187000WE
Darmor: C04p22220.1_BnaDAR
BH: BnaC04T195000BH
Quinta: BnaC04T0183600QU
ZS2: BnaC04T187100ZS2
SW: BnaC04T192700SW
Express61: A09p005900.1_BnaEXP
Xiaoyun: BnaC04G0189200XY
P202: BnaC04G014260P202.1
BL: BnaC04T195000BH
TA: BnaA09T063000TA
Da-Ae: Not available
RB: BnaC04T190900RB
No2127: BnaC04T0184000NO
P130: BnaC04G020900P130.1
Length: 100
KOG ID: KOG1436
KOG E-value: 2.370000e-20
KOG Score: 85.1
KOG Annotation: Nucleotide transport and metabolism
Biological Process: -
Cellular Component: GO:0005737(cytoplasm)
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors)
KEGG Ortholog: K00254 DHODH, pyrD; dihydroorotate dehydrogenase [EC:1.3.5.2]
NR Protein: XP_013597843.1
NR E-value: 1.100000e-26
NR Score: 124.4
NR Annotation: XP_013597843.1 PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Brassica oleracea var. oleracea]
SwissProt Protein: P32746|PYRD_ARATH
SwissProt E-value: 9.460000e-32
SwissProt Score: 118.0
SwissProt Annotation: Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PYRD PE=1 SV=2
CDS Sequence (307 bp)
ATGATCAGTGTTCTTCCTCTACTAATATCGTCGGACGGTTCACTTTCATCGAAACCTAACGTTTTTTTAC
ACTTGGGAAAGATTCCACTGATAGGCTGCGGTGGTGTTAGAAGTGGTGAGGATGCTTACAAGAAGACAAG
AGCCGGAGCTACTATTTTCCAGCTGTACATTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAAAA
ACTTATCTCATTCACAAAGAAGAGCTGGTGAGCTTATTAGAAAGGGATGGCTTCAAGTTGATTCAAGAAG
CTATTGGTGCAGATCATAGATGA
Upstream Sequence
ATGATCAGTGTTCTTCCTCTACTAATATCGTCGGACGGTTCACTTTCATCGAAACCTAACGTTTTTTTAC
ACTTGGGAAAGATTCCACTGATAGGCTGCGGTGGTGTTAGAAGTGGTGAGGATGCTTACAAGAAGACAAG
AGCCGGAGCTACTATTTTCCAGCTGTACATTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAAAA
ACTTATCTCATTCACAAAGAAGAGCTGGTGAGCTTATTAGAAAGGGATGGCTTCAAGTTGATTCAAGAAG
CTATTGGTGCAGATCATAGATGA
Downstream Sequence
GTGTGTAAGAACAATGGTGTGTAAGAAATTAATATCAACTAGAAATTGATTCGCACATCC
ACCCATACgtgtctccgtttttctatttgaaaaaattagaaaaaaagacacctagaactt
tggtttgttccaataagatttttagaagattatttaggagaataagatttacattcttgt
AAATACCATAATACTCTTTAATTAACCAATAAATCTGAATTATAAATAATAGTCTTTGCA
ATTGATTTAGTTAttaaaaaaagttaaaaaacagaaaaaaaagaaaaccgagagaggtac
aacttgagtagttttaccctaattattttcattttactcgtcttctccgccaaagcttct
caattccatcaatgccgatctatatttttggAGAATCTTTTGTTCTTCATCGATATTTAT
CCACTTTTTCGAGTCTAATATCGTTTTCTTCATCCTCCTCTTCGTTCCCACATACGAATC
AACGAAATCGAAGTGTTCTTCCTCTACTAATATCGTCGGACGGTTCACTTTCATCGAAAC
CTAACGTTTTTTTACACTTGGTATGCGTTTCTTCATACAGATTCTCCTAACCCTAGATAT
TTTTAAAACCAATTTGTCATCTCTTCTAAACTAAATTAGTTGTATGGGTTGTGTAACTAA
TCATCTTATACACTACGATTAAGTCAATGCATGTTACTGTTTTTGATTTGTATTTGTCAA
TTTAGTAGTTTTTTCAAAGGGGGGAAATTGGGGTAAACAATGCAAGATACTGATCGATTA
TACCAAGGAACTAAAACATGTCTGATTCGGGTTATTGGCTATTTCCATGATCTCTTAGGG
AAAGATTCCACTGATAGGCTGCGGTGGTGTTAGAAGGTAAACATCTAAACTTGTTTTTAG
ATTGTGAGGAAAACAAACACACACAAAATATGATGCAGATGAGTTTTTGTGTTTTCAGTG
GTGAGGATGCTTACAAGAAGACAAGAGCCGGAGCTACTATTTTCCAGCTGTACATTGGGT
TTGCGTATGGTGGACCTGCTCTCATCCCACAAAAAACTTATCTCATTCACAAAGTTATAA
AGTTTTTATTTTTGTCAACGTCTCTTTGTTGTAATCGACTCTGCATATGGAATTCAGATA
ATGTCTTCATTGATACTAATATTCAATGAAATTTTTTGGTGCAATAGGAAGAGCTGGTGA
GCTTATTAGAAAGGGATGGCTTCAAGTTGATTCAAGAAGCTATTGGTGCAGATCATAGAT
GATGAAACAATAACAGTAACAAAAAAATACAGAGGAGAGTCTCTTTTCTTACAGCAAAAA
CACATTGATTTGTTGTTTCTTTCTGCCTAAACAATAACATCATGACTCCTGTCTGTTGTT
TAAATGGGAAATAACAAAGCAACATTTGTTTTTCTCATTGTAACTAGTTTATCATTTGTT
CTCTTCATATTACAACATAACTTCTTCTACCACAAAAAAAAAAACACAGCTAATTAACTT
GAGAATTAAGATCAAAAGAGTCGTAACAAGACTCATCAGACACCATATGTGCAATCTCAA
AACATCAAAATAGTAAAAGCCACTACAAAATAACCAAGAGCGTTTATATGACGTTAAGCC
ACTACAAAACTCATCAGAGACCATGATCTTGATCTACTCCAATAGAGTAGTAATTTCTAA
TGTTATCTTTATCTACCGAAAAAACTCTGGTCACTGCAACTTGACATCCATACACCAGAT
TTAACATAGATTAGAACCATGTTGTATTGATAGAGAGAAGAGATGATGGTTATGTCGATG
AAGAAGATAGAGATATTGAAGCCCAAAGAAAAGCCCAACCTTATGATCCATTAGAATCTT
TAGACTAGGGTTATAGACTCATATatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatcgttaacagttctgaagttgtaactttggc
tgcatattgagcagcctctc
Pro Sequence
MISVLPLLISSDGSLSSKPNVFLHLGKIPLIGCGGVRSGEDAYKKTRAGA
TIFQLYIGFAYGGPALIPQKTYLIHKEELVSLLERDGFKLIQEAIGADHR
mRNA Sequence
ATGATCAGTGTTCTTCCTCTACTAATATCGTCGGACGGTTCACTTTCATCGAAACCTAACGTTTTTTTAC
ACTTGGGAAAGATTCCACTGATAGGCTGCGGTGGTGTTAGAAGTGGTGAGGATGCTTACAAGAAGACAAG
AGCCGGAGCTACTATTTTCCAGCTGTACATTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAAAA
ACTTATCTCATTCACAAAGAAGAGCTGGTGAGCTTATTAGAAAGGGATGGCTTCAAGTTGATTCAAGAAG
CTATTGGTGCAGATCATAGATGA