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Detail for ZS11_C04G32110.t1

Genome:
ZS11: ZS11_C04G32110.t1
ZS11_v0: BnaC04T0279100ZS
WE: WE_A04G01980.t1
WE_v0: BnaA04T0016900WE
Darmor: A04p01810.1_BnaDAR
BH: BnaA04T017200BH
Quinta: BnaA04T0009600QU
ZS2: BnaA04T018900ZS2
SW: BnaA04T020900SW
Express61: A04p001620.1_BnaEXP
Xiaoyun: BnaA04G0018300XY
P202: BnaC04G023030P202.1
BL: BnaA04T017200BH
TA: BnaA04T019100TA
Da-Ae: Not available
RB: BnaC04T281200RB
No2127: BnaC04T0267800NO.2
P130: BnaA04G001720P130.1
Length: 181
KOG ID: KOG3363
KOG E-value: 6.720000e-108
KOG Score: 306.0
KOG Annotation: Function unknown
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
NR Protein: XP_013670627.1
NR E-value: 8.600000e-99
NR Score: 364.8
NR Annotation: XP_013670627.1 uncharacterized protein LOC106375304 [Brassica napus]
SwissProt Protein: Q6DFN1|NDUF3_XENTR
SwissProt E-value: 2.170000e-16
SwissProt Score: 75.9
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1
CDS Sequence (553 bp)
ATGATAAATCGTTTGGAGAAGACCGGAGATGGCGGTGAGACAAAAAAAAAAGCTATGGCGACGTTGCCGA
AGCTGATTCGAGCCATGAGAAATGAATTTCCCAAGCATCACAACCTCGTCTTGCCATCTCTACGAAGAGC
TTTCTCTCTCTACGATCAGATCAATCTCATCGACAACGTCCCCGAGGATCAGCTTCGGTTTCAGGAATTT
GATGAGGCGAGTTTCACGGTGAATGGGGTTAAGTACGATGGGAGCTTGCTCTGTGTTGGGAACTTGCTGA
TGTCATGGAGCCCTCGTAGCTTCTCCGAGATCACAACAGATAGCTTGTCAATCTTCCAGACTGTTCGACC
AATTCCAGAGCTTTTAATTGTCGGCTGTGGAAGATACAATCACCCAGTGAATCCCCAAGTCCGTCAGTTC
GTGAAGTCAATTGGAATGAAGCTAGAAACTTTGGACTCTAGAAATGCTGCATCGACTTACAACATACTGA
ATGAGGAAGGCAGGATCGTGGCGGCTGCGTTGCTTCCTTATGGAGTTACATCCTAA
Upstream Sequence
GGGTTCGTAAAAGTCTAGTCGTTTCGAATGATAAATCGTTTGGAGAAGACCGGAGATGGCGGTGAGACAA
AAAAAAAAGCTATGGCGACGTTGCCGAAGCTGATTCGAGCCATGAGAAATGAATTTCCCAAGCATCACAA
CCTCGTCTTGCCATCTCTACGAAGAGCTTTCTCTCTCTACGATCAGATCAATCTCATCGACAACGTCCCC
GAGGATCAGCTTCGGTTTCAGGAATTTGATGAGGCGAGTTTCACGGTGAATGGGGTTAAGTACGATGGGA
GCTTGCTCTGTGTTGGGAACTTGCTGATGTCATGGAGCCCTCGTAGCTTCTCCGAGATCACAACAGATAG
CTTGTCAATCTTCCAGACTGTTCGACCAATTCCAGAGCTTTTAATTGTCGGCTGTGGAAGATACAATCAC
CCAGTGAATCCCCAAGTCCGTCAGTTCGTGAAGTCAATTGGAATGAAGCTAGAAACTTTGGACTCTAGAA
ATGCTGCATCGACTTACAACATACTGAATGAGGAAGGCAGGATCGTGGCGGCTGCGTTGCTTCCTTATGG
AGTTACATCCTAACTCACAGCACGGTCTGTAACTGAAATGTTTCACACTTGAAACTTTTGTAAAAGAATC
AGTCTTTCCATACTGAAACTTATCTTGTCTTATTATAGCTTAAATAAAATTGAGCTTCATCTGGAAAAAC
GTATTGCAGTTTCCTGCCTTATTACATTGGTGACGTGGAAAGTAAAGAACGTTGTTCAACTTATGTTCTA
AATAGCACGAGACTATTGTTTTTCTCACCATTTTCAACCACTGCTAGTCATTTGAGGGTTTCATAGTTTT
GTTGAAGTTAATTTAGAGAAGATTTTGCAGTAATTTTAGC
Downstream Sequence
AGTAATCATACCAAACCCACCTCCCATTCTCTCTGATTCGTTCTCCTGATTTGAGTTTTC
GTTGTGTTTCGTCGTAAAGTTGGAACCTTTCGACCATTTTGTTGGGTGAAGTTTGGATTT
TGGATATGTAGTGGTGGGTTTGTCTTTGGTTATGCAGATTTGATGAGGCGAGTTTCACGG
TGAATGGGGTTAAGTACGATGGGAGCTTGCTCTGTGTTGGGAACTTGCTGATGTCATGGA
GCCCTCGTAGCTTCTCCGAGATCACAACAGATAGGTGCCGTCTCCCTCTCTCTTGAGTGA
AAGCTTTAGAGTTGCTTAAGTTTTGGTAAAACGTTTGACATGTCTCCTCTATTCTAATGG
ATGGATGCAGCTTGTCAATCTTCCAGACTGTTCGACCAATTCCAGGTACAATCTTTACCT
TTTGCACATATATATATATATATATATGACTCTCTTGTCTCTATGTTTTTGCCTTAACGC
TTTCTAGAGCTTTTAATTGTCGGCTGTGGAAGATACAATCACCCAGTGAATCCCCAAGTC
CGTCAGTTCGTGAAGTCAATTGGAATGAAGCTAGAAACTTTGGACTCTGTATCTCTATCC
CTCTCATGCTTTGGTTCTGTTGGTTTTGGAAAATTTTTATGTGGTTATTGATTAAACTCT
CTCTTTCTGACCAGAGAAATGCTGCATCGACTTACAACATACTGAATGAGGAAGGCAGGA
TCGTGGCGGCTGCGTTGCTTCCTTATGGAGTTACATCCTAACTCACAGCACGGTCTGTAA
CTGAAATGTTTCACACTTGAAACTTTTGTAAAAGAATCAGTCTTTCCATACTGAAACTTA
TCTTGTCTTATTATAGCTTAAATAAAATTGAGCTTCATCTGGAAAAACGTATTGCAGTTT
CCTGCCTTATTACATTGGTGACGTGGAAAGTAAAGAACGTTGTTCAACTTATGTTCTAAA
TAGCACGAGACTATTGTTTTTCTCACCATTTTCAACCACTGCTAGTCATTTGAGGGTTTC
ATAGTTTTGTTGAAGTTAATTTAGAGAAGATTTTGCAGTAATTTTAGCTCCCATATTTGA
AGATCAGTGTACTGAGTTAGAGGGTCTAGAATCACTCTTGACTGTTCCATTAGATAGTGC
TGGATCTTGAGGAATAATCACAAGCTTGTTCTCAGGCCATGTAGACCTATCTTTGTAATA
TCAACATCATCAATAACTATGGTTCCTTGACTTGGCTCAACAATCCTAAATATTGCCTAA
AATCAAAGTTGATTTGCCGCTTCCTATTCTTCCTACAACTCCAAAGTCTCCAATCTTTCC
CCTTTCTTGAAATTCACAGGTGGTGTTCTTCAGGACAGTTGGGACATCTCAAGCATGGCC
GGTCCTGGCCAAGCCGGATAAAACATTTGCCTCAAGCTCCCAAAATTTTTGAAAAAAATT
ATATATAAATAAGCTCCTAAATTTGTAAAAATAAATAAATAATAATAGACCTCAAACTAT
AGAAATTCTTTTTAAATCGTCTATAGCCCCCAAAATTTCAGGACCGGCTCAGGGTTAGAG
AATCTTGGTTACAGTTGTTTATGTGAACTTGACTATGAAATCTTATGTTCAAGAGTAATG
TATCAGCATCAGCTTTGTTGTTTACCTGAACGTCTTTGAAGACAATTGATCCAACATTTG
ACCACTTATCAATAGGTCTGTGATCATCAATTACTAATGGTGCCACCTCACTGGGTTTTT
ACAGTACTGAAGAATTCTTTCTACAGAAATCATCTTGTTTTCAGCATTACATTTGTTCCA
TATCACTGTGGCTTGTAACACATTCAGACTTAAGCCATTTTGGTATAAACTTTAGTTATA
AAGTTTATTTTTTCAGTACAATTTATAGTCTGTGTCGGAGTTAAGGCAAAAAAGTAACAA
AGAGAAACAAAAACGAAAGCCTCAGGTCTAATAATAACAACTTTTTTTACAAGAAATGGT
TTCGTTAGAGTTCTTTGTTG
Pro Sequence
MINRLEKTGDGGETKKKAMATLPKLIRAMRNEFPKHHNLVLPSLRRAFSL
YDQINLIDNVPEDQLRFQEFDEASFTVNGVKYDGSLLCVGNLLMSWSPRS
FSEITTDSLSIFQTVRPIPELLIVGCGRYNHPVNPQVRQFVKSIGMKLET
LDSRNAASTYNILNEEGRIVAAALLPYGVTS
mRNA Sequence
GGGTTCGTAAAAGTCTAGTCGTTTCGAATGATAAATCGTTTGGAGAAGACCGGAGATGGCGGTGAGACAA
AAAAAAAAGCTATGGCGACGTTGCCGAAGCTGATTCGAGCCATGAGAAATGAATTTCCCAAGCATCACAA
CCTCGTCTTGCCATCTCTACGAAGAGCTTTCTCTCTCTACGATCAGATCAATCTCATCGACAACGTCCCC
GAGGATCAGCTTCGGTTTCAGGAATTTGATGAGGCGAGTTTCACGGTGAATGGGGTTAAGTACGATGGGA
GCTTGCTCTGTGTTGGGAACTTGCTGATGTCATGGAGCCCTCGTAGCTTCTCCGAGATCACAACAGATAG
CTTGTCAATCTTCCAGACTGTTCGACCAATTCCAGAGCTTTTAATTGTCGGCTGTGGAAGATACAATCAC
CCAGTGAATCCCCAAGTCCGTCAGTTCGTGAAGTCAATTGGAATGAAGCTAGAAACTTTGGACTCTAGAA
ATGCTGCATCGACTTACAACATACTGAATGAGGAAGGCAGGATCGTGGCGGCTGCGTTGCTTCCTTATGG
AGTTACATCCTAACTCACAGCACGGTCTGTAACTGAAATGTTTCACACTTGAAACTTTTGTAAAAGAATC
AGTCTTTCCATACTGAAACTTATCTTGTCTTATTATAGCTTAAATAAAATTGAGCTTCATCTGGAAAAAC
GTATTGCAGTTTCCTGCCTTATTACATTGGTGACGTGGAAAGTAAAGAACGTTGTTCAACTTATGTTCTA
AATAGCACGAGACTATTGTTTTTCTCACCATTTTCAACCACTGCTAGTCATTTGAGGGTTTCATAGTTTT
GTTGAAGTTAATTTAGAGAAGATTTTGCAGTAATTTTAGC