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DETAIL

Detail for ZS11_C04G40170.t1

Genome:
ZS11: ZS11_C04G40170.t1
ZS11_v0: BnaC04T0345200ZS
WE: WE_A06G43740.t1
WE_v0: BnaC04T0331100WE
Darmor: C04p40510.1_BnaDAR
BH: BnaC05T420100BH
Quinta: BnaC02T0376600QU
ZS2: BnaA06T338600ZS2
SW: BnaC05T410400SW
Express61: C04p028640.1_BnaEXP
Xiaoyun: BnaC04G0348200XY
P202: BnaA06G029650P202.6
BL: BnaC05T420100BH
TA: BnaC04T335500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11340D
RB: BnaC05T416900RB
No2127: BnaC04T0322100NO
P130: BnaA06G033860P130.5
Length: 398
KOG ID: KOG2901
KOG E-value: Not available
KOG Score: 530.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
NR Protein: VDD10393.1
NR E-value: 1.100000e-210
NR Score: 737.6
NR Annotation: VDD10393.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: Q54S83|NDUF7_DICDI
SwissProt E-value: 9.420000e-46
SwissProt Score: 167.0
SwissProt Annotation: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=midA PE=1 SV=1
CDS Sequence (1214 bp)
ATGTTGGGATTTCCCCATGCCGGTGTGTCCAAGATCGGCGTTGGATCCATCACCTGTTACCGCCAGATCC
GCCGCCTACGGAGTTGTCCTGCGGCCTTAAACGGTGGCTCCGAAACAGAGACCAACTCCGAAACCCTAGC
TTCCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAGGTCCGAGAATCACAAGCTGTCGCACTCCCAAGAC
GGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGAGAGAGAACCACCATCCCTCACCGTAGATCCGTCG
ACACCATCTCACTCCCCGACAATCAGACGAGCCCAACAAATCCCGCGTTGCAGAAACGTCAACACCAGAA
CCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAAAGCTATAAGTTCACTAGCTGGGACACCTGTGCAC
TGGCACGCTACTCTTGAAGAGGTACCATCAGGAGTACCAACAATAATCATAGCTCATGAGTTCTATGATG
CTTTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTATCTTAAATGGACTTACTCTGCAAAAATCTCCACT
TGGCTGGTGTGAGAAAATGGTTGATGTGGGAGAAGATTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCT
ACACCTGCAGCCTTATATCTGGTGAAACGTTGCACATGGGCTACACCTGAGGAAAAGGAGAAGCTGGATC
ATGTCGAGATCAACCCGAAGTTAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATGGAGG
TGGAGCACTTATAATCGATTATAGGAAGGATGAAATCATTTCAGACAGTCTACAGGCTATTAGAGAACAC
AAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCGATAA
AACACTCAGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGGACCTATGACTCAGTCTCAGTTCTTGGG
TTCGCTTGGAATAAACTTCAGAGTTGATGCGTTGCTGCAGAACTGCGACGATGAGCAAGCAGAGTCATTG
AGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTCTGGGAAGGACCTGATGAACAGACAC
CAATTGGAATGGGGGAGAGGTATCTTACAATGGCTATTATCAACAGAAACCAAGGCACTCCGGCTCCGTT
CCAGTAA
Upstream Sequence
ATGTTGGGATTTCCCCATGCCGGTGTGTCCAAGATCGGCGTTGGATCCATCACCTGTTACCGCCAGATCC
GCCGCCTACGGAGTTGTCCTGCGGCCTTAAACGGTGGCTCCGAAACAGAGACCAACTCCGAAACCCTAGC
TTCCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAGGTCCGAGAATCACAAGCTGTCGCACTCCCAAGAC
GGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGAGAGAGAACCACCATCCCTCACCGTAGATCCGTCG
ACACCATCTCACTCCCCGACAATCAGACGAGCCCAACAAATCCCGCGTTGCAGAAACGTCAACACCAGAA
CCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAAAGCTATAAGTTCACTAGCTGGGACACCTGTGCAC
TGGCACGCTACTCTTGAAGAGGTACCATCAGGAGTACCAACAATAATCATAGCTCATGAGTTCTATGATG
CTTTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTATCTTAAATGGACTTACTCTGCAAAAATCTCCACT
TGGCTGGTGTGAGAAAATGGTTGATGTGGGAGAAGATTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCT
ACACCTGCAGCCTTATATCTGGTGAAACGTTGCACATGGGCTACACCTGAGGAAAAGGAGAAGCTGGATC
ATGTCGAGATCAACCCGAAGTTAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATGGAGG
TGGAGCACTTATAATCGATTATAGGAAGGATGAAATCATTTCAGACAGTCTACAGGCTATTAGAGAACAC
AAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCGATAA
AACACTCAGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGGACCTATGACTCAGTCTCAGTTCTTGGG
TTCGCTTGGAATAAACTTCAGAGTTGATGCGTTGCTGCAGAACTGCGACGATGAGCAAGCAGAGTCATTG
AGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTCTGGGAAGGACCTGATGAACAGACAC
CAATTGGAATGGGGGAGAGGTATCTTACAATGGCTATTATCAACAGAAACCAAGGCACTCCGGCTCCGTT
CCAGTAA
Downstream Sequence
GTAAACCCTAATCGTGTTCTGGTGACTAACATTCTTTCTCCGTCCAGCTACAACCTCTGA
ACTTTATCACTGAATCTGAAACGGTACGATTTATGTGTTTTTCGTGTGGTGTTCCTTATT
AATTCAATCTCCATCAAGCATTGCATATACACTTGGTGGAGTGCAGTCCCGCGTTGCAGA
AACGTCAACACCAGAACCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAAAGCTATAA
GTTCACTAGCTGGGACACCTGTGCACTGGCACGCTACTCTTGAAGAGGTACCATCAGGAG
GTATGCATGTTTGTTACATTTACTTATTGAGACTCTCTTATAAGGCTCTTGGCTTAATAT
AGCAACAGCCAACGTCGTAAGCAATGAAAAATATGATGATCTGCATCGTTCTTCATTGTA
TCTATTGTTCTCTTTTGCTTGCCTTGGCAGTACCAACAATAATCATAGCTCATGAGTTCT
ATGATGCTTTTCCAGTTCATCAGTTTCAGGTTTGTGTGATTTGCAATATAGTCTTCTCCT
TTTAGTTTAGTATGTGTATCTTAAATGGACTTACTCTGCAAAAATCTCCACTTGGCTGGT
GTGAGAAAATGGTTGATGTGGGAGAAGATTCACAGTAAGTATTTGTATATATATAATATG
CAAAGAAAACTTCAGAGCTGATCTATGCGTTATTAGTTTTAGGTTCCGCTTTGTTCTCTC
CCCACAGCCTACACCTGCAGCCTTATATCTGGTGAAACGTTGCACATGGGCTACACCTGA
GGAAAAGGAGAAGCTGGATCATGTCGAGATCAACCCGAAGTTAATGGATTTGACTCAAGA
AATAGCCAAGAGAATAGGCTCTGATGGAGGTGGAGCACTTATAATCGATTATAGGAAGGA
TGAAATCATTTCAGACAGTCTACAGGTTTGTGTCCTAAAAAAATGCTCTAACCAATGCTT
ATAAAGTCTTTTGTGTCTGAATCTATGGATATGATATAAGGCTATTAGAGAACACAAGTT
TGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTC
GATAAAACACTCAGCTGAGGAAGCTTCAGGTAGGTTCATATACTCACTACTCATCATTGT
AATATTAGAGAGTTATAAACTTACTTAAACCAAATGAAAACGTGTGTGTGTTGTTCAGAA
AATGTGACAGTCCATGGACCTATGACTCAGTCTCAGTTCTTGGGTTCGCTTGGAATAAAC
TTCAGAGTTGATGCGTTGCTGCAGAACTGCGACGATGAGCAAGCAGAGTCATTGAGGTCT
GGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTCTGGGAAGGACCTGATGAACAG
ACACCAATTGGAATGGGGGAGAGGTATCTTACAATGGCTATTATCAACAGAAACCAAGGC
ACTCCGGCTCCGTTCCAGTAACAGGCTGAAGCTTTCAAACAAGGACACTACACTCCTTTG
TTTTTTTTCTTTGAACTTGGCTTATCTTATGAATTTGATTGGTTGACTTTGGGTTTAAAG
CTTACGAAATGATTTCAATCCCCATTTTATTTTCAGTGTCATTCATCTTCATGTATGGAT
CTCAGTAGCTTGATTTCTTCTGCTATTTTGTTTGAAATCTGCACGATTGTTGATTCTAAT
AGCATCTGAATCTCTGTGATCAATACCTTTGGCTGAAGAACCGTCACCTCTGCATACCAC
CACAATCGTGGAGAAGTGTACGCTCAAGCTTGTGGATGATTACAAGCATATGCTTTGCCA
AGCTACTGAGCCTATGTCCACCTTCTTAGAGTACATCAGGTGAGAATCATTCTTGATCAA
CAGATTGTGGTGCTTCGGTGTTGTTATTGCCCTTTTCAGTTTCCAGTAGTAAGCGTAGTA
GTTTCGTTCATATTTAGCTTTGCTTAAAATTCTCTCGATGTGCATCATAGTGTGTAATGT
TTGGTACTTTCGTGAAGCTC
Pro Sequence
MLGFPHAGVSKIGVGSITCYRQIRRLRSCPAALNGGSETETNSETLASRI
CSSLQSSLRSENHKLSHSQDGGEEAGPTRNKRERTTIPHRRSVDTISLPD
NQTSPTNPALQKRQHQNLKCTDESSSEKKAISSLAGTPVHWHATLEEVPS
GVPTIIIAHEFYDAFPVHQFQFSMCILNGLTLQKSPLGWCEKMVDVGEDS
QFRFVLSPQPTPAALYLVKRCTWATPEEKEKLDHVEINPKLMDLTQEIAK
RIGSDGGGALIIDYRKDEIISDSLQAIREHKFVNILDNPGSADLSAYVDF
PSIKHSAEEASENVTVHGPMTQSQFLGSLGINFRVDALLQNCDDEQAESL
RSGYWRLVGDGEAPFWEGPDEQTPIGMGERYLTMAIINRNQGTPAPFQ
mRNA Sequence
ATGTTGGGATTTCCCCATGCCGGTGTGTCCAAGATCGGCGTTGGATCCATCACCTGTTACCGCCAGATCC
GCCGCCTACGGAGTTGTCCTGCGGCCTTAAACGGTGGCTCCGAAACAGAGACCAACTCCGAAACCCTAGC
TTCCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAGGTCCGAGAATCACAAGCTGTCGCACTCCCAAGAC
GGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGAGAGAGAACCACCATCCCTCACCGTAGATCCGTCG
ACACCATCTCACTCCCCGACAATCAGACGAGCCCAACAAATCCCGCGTTGCAGAAACGTCAACACCAGAA
CCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAAAGCTATAAGTTCACTAGCTGGGACACCTGTGCAC
TGGCACGCTACTCTTGAAGAGGTACCATCAGGAGTACCAACAATAATCATAGCTCATGAGTTCTATGATG
CTTTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTATCTTAAATGGACTTACTCTGCAAAAATCTCCACT
TGGCTGGTGTGAGAAAATGGTTGATGTGGGAGAAGATTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCT
ACACCTGCAGCCTTATATCTGGTGAAACGTTGCACATGGGCTACACCTGAGGAAAAGGAGAAGCTGGATC
ATGTCGAGATCAACCCGAAGTTAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATGGAGG
TGGAGCACTTATAATCGATTATAGGAAGGATGAAATCATTTCAGACAGTCTACAGGCTATTAGAGAACAC
AAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCGATAA
AACACTCAGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGGACCTATGACTCAGTCTCAGTTCTTGGG
TTCGCTTGGAATAAACTTCAGAGTTGATGCGTTGCTGCAGAACTGCGACGATGAGCAAGCAGAGTCATTG
AGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTCTGGGAAGGACCTGATGAACAGACAC
CAATTGGAATGGGGGAGAGGTATCTTACAATGGCTATTATCAACAGAAACCAAGGCACTCCGGCTCCGTT
CCAGTAA