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DETAIL

Detail for ZS11_C04G44020.t1

Genome:
ZS11: ZS11_C04G44020.t1
ZS11_v0: BnaC04T0377500ZS
WE: WE_C04G45430.t1
WE_v0: BnaC04T0364700WE
Darmor: C04p44380.1_BnaDAR
BH: BnaC04T400100BH
Quinta: BnaC04T0322600QU
ZS2: BnaC04T365400ZS2
SW: BnaC04T393400SW
Express61: C04p029980.2_BnaEXP
Xiaoyun: BnaC04G0381500XY
P202: BnaC04G031070P202.1
BL: BnaC04T400100BH
TA: BnaC04T365200TA
Da-Ae: Not available
RB: BnaC04T387300RB
No2127: BnaC04T0364900NO
P130: BnaC04G047880P130.1
Length: 746
KOG ID: KOG2282
KOG E-value: Not available
KOG Score: 1450.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity),GO:0051536(iron-sulfur cluster binding),GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog: K03934 NDUFS1; NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:7.1.1.2]
NR Protein: CDY56301.1
NR E-value: Not available
NR Score: 1492.2
NR Annotation: CDY56301.1 BnaC04g55940D [Brassica napus]
SwissProt Protein: Q9FGI6|NDUS1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1450.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1467 PE=1 SV=2
CDS Sequence (2273 bp)
ATGGGTGTAGGAATCTTAGCTTCTCGAGCGATTCGACCAGCTTCTCGTCTTGTTCGATCTCAACCCTCCA
ATCTCTTCCTCCGCACCATCGTCTCGAAACCAGAGCTCCAATCTCCCGAAGCCGCCGCTGTCTCGCAGCC
TGAGCCTCCGAAGAATCAGATCCTCCCTCCGAGGAACCCCGTCGGCGGAGCGCGCGTCCATTTCACCAAC
GCCGAGGATGCGATCGAGGTCTTCGTTGATGGTTACGCGGTCAAAGTCCCTAAAGGCTTCACTGTTCTGC
AGGCCTGCGAGGTCGCCGGAGTTGATATCCCGAGGTTTTGTTACCATTCTCGCTTGTCGATTGCTGGAAA
CTGCAGGATGTGTCTTGTTGAGGTGGAGAAATCTCCCAAGCCTGTAGCTTCATGTGCTATGCCTGCTCTC
CCCGGGATGAAGATTAAGACCGATACGCCAATAGCAAAGAAGGCGAGGGAAGGAGTGATGGAGTTCTTGT
TGATGAACCATCCTCTGGATTGCCCTATATGTGACCAAGGAGGAGAGTGTGATCTTCAGGACCAGTCTAT
GGCCTTTGGATCTGACAGAGGCCGTTTCACCGAGATGAAAAGATCTGTCGTTGATAAGAATCTCGGTCCT
CTTGTCAAGACTGTTATGACTCGGTGTATCCAGTGTACAAGGTGTGTACGATTTGCGTCGGAAGTTGCTG
GGGTTCAGGATCTTGGAATGCTAGGCCGTGGAAGCGGAGAAGAAATTGGAACTTATGTTGAAAAGCTTAT
GACTAGTGAACTCTCTGGAAATGTTATTGACATCTGTCCTGTGGGAGCCTTGACCTCAAAGCCTTTTGCT
TTTAAAGCCAGGAACTGGGAGTTGAAAGGAACTGAAACCATTGATGTTAGTGACGCCGTTGGTTCCAACA
TCCGTGTTGATAGTAGAGGACCTGAGGTGATGCGTATCATTCCACGTCTTAATGAGGATATAAACGAAGA
GTGGATATCTGACAAAACCCGATTCAGCTATGACGGTCTGAAAAGGCAAAGGCTGAGCGACCCTATGATT
CGAGATTCAGATGGACGATTCAAGGCTGTGAGCTGGCGTGATGCCTTGGCCGTTGTGGGTGATATCATCC
ATCAGGTCAAACCAGATGAGATTGTTGGAATAGCAGGTCAGCTATCTGATGCTGAATCCATGATGGTATT
GAAGGACTTCGTTAACAGAATGGGTTCAGACAATGTCTGGTGTGAAGGAACAGCTGTTGGTGTTGATGCT
GATCTTAGGTACAGCTATCTAATGAACAGTAGCATCAGTGGGCTTGAGAACGCAGATGTTTTCCTTCTCG
TTGGTACCCAGCCTAGAGTTGAAGCTGCAATGGTGAACGCTAGGATCTGCAAGACAGTCCGTGCATCGAA
TGCCAAGGTTGCATACATTGGTCCGCCTGCAGATTTCAACTACGACTGCAAACACCTCGGGACTGGACCT
GATACCCTCAAGGAAATCGCTGAGGGACGTCACCCGTTCTGCTCGGCTCTCAAGAACGCCAAAAACCCTG
CAATCATTGTTGGCGCTGGTCTCTTCAACAGAACCGACAAAGATGCTATCCTCGCTGCTGTTGAGTCCAT
TGCACAAGCCAACAATGTCGTCAGACCAGACTGGAACGGTCTTAACTATCTCCTCCTGTACGCTGCTCAA
GCAGCTGCCCTTGATCTTGGTCTAATTCAACAGTCTGCTAAAGCCCTTGAGTCTGCGAAATTCGTCTACT
TGATGGGAGCAGACGATGTAGATGTTGACAAGATTCCTAAAGATGCCTTTGTGGTTTACCAAGGTCACCA
TGGAGACAAAGCGGTTTACCGTGCAAACGTAATCCTCCCTGCTTCGGCCTTCACCGAGAAAGAGGGAACC
TATGAGAACACAGAAGGATTCACCCAACAGACTGTTCCCGCTGTCCCGACGGTTGGTGATGCAAGAGATG
ACTGGAAGATTGTGAGAGCTTTGTCCGAGGTATCGGGTGTGAATCTTCCATACAACTCAATCGAAGGTGT
TAGGTCTAGGATCAAGAGCGTCGCTCCAAATCTAGTCCACACAGATGAACGAGAGCCAGCTGCTTTTGGG
CCATCATTGAAGCCTGAGTGCAAGGAGACAATGAGCACAACGCCGTTCAAACCAGTGGTCGAGAATTTTT
ACATGACAAACGCCATCACGAGAGCATCAAAGATCATGGCACAGTGCAGTGCTGTCCTCTTGAAGAAGTG
A
Upstream Sequence
CCTAGCCGCACAGATAGAAAACAACAAGAAGATCGAGATTATATTCACAAAGTGGAAGAAGGACAAGAAG
AAGAAGAAGAGATCCACAAACAAACGCAATGGGTGTAGGAATCTTAGCTTCTCGAGCGATTCGACCAGCT
TCTCGTCTTGTTCGATCTCAACCCTCCAATCTCTTCCTCCGCACCATCGTCTCGAAACCAGAGCTCCAAT
CTCCCGAAGCCGCCGCTGTCTCGCAGCCTGAGCCTCCGAAGAATCAGATCCTCCCTCCGAGGAACCCCGT
CGGCGGAGCGCGCGTCCATTTCACCAACGCCGAGGATGCGATCGAGGTCTTCGTTGATGGTTACGCGGTC
AAAGTCCCTAAAGGCTTCACTGTTCTGCAGGCCTGCGAGGTCGCCGGAGTTGATATCCCGAGGTTTTGTT
ACCATTCTCGCTTGTCGATTGCTGGAAACTGCAGGATGTGTCTTGTTGAGGTGGAGAAATCTCCCAAGCC
TGTAGCTTCATGTGCTATGCCTGCTCTCCCCGGGATGAAGATTAAGACCGATACGCCAATAGCAAAGAAG
GCGAGGGAAGGAGTGATGGAGTTCTTGTTGATGAACCATCCTCTGGATTGCCCTATATGTGACCAAGGAG
GAGAGTGTGATCTTCAGGACCAGTCTATGGCCTTTGGATCTGACAGAGGCCGTTTCACCGAGATGAAAAG
ATCTGTCGTTGATAAGAATCTCGGTCCTCTTGTCAAGACTGTTATGACTCGGTGTATCCAGTGTACAAGG
TGTGTACGATTTGCGTCGGAAGTTGCTGGGGTTCAGGATCTTGGAATGCTAGGCCGTGGAAGCGGAGAAG
AAATTGGAACTTATGTTGAAAAGCTTATGACTAGTGAACTCTCTGGAAATGTTATTGACATCTGTCCTGT
GGGAGCCTTGACCTCAAAGCCTTTTGCTTTTAAAGCCAGGAACTGGGAGTTGAAAGGAACTGAAACCATT
GATGTTAGTGACGCCGTTGGTTCCAACATCCGTGTTGATAGTAGAGGACCTGAGGTGATGCGTATCATTC
CACGTCTTAATGAGGATATAAACGAAGAGTGGATATCTGACAAAACCCGATTCAGCTATGACGGTCTGAA
AAGGCAAAGGCTGAGCGACCCTATGATTCGAGATTCAGATGGACGATTCAAGGCTGTGAGCTGGCGTGAT
GCCTTGGCCGTTGTGGGTGATATCATCCATCAGGTCAAACCAGATGAGATTGTTGGAATAGCAGGTCAGC
TATCTGATGCTGAATCCATGATGGTATTGAAGGACTTCGTTAACAGAATGGGTTCAGACAATGTCTGGTG
TGAAGGAACAGCTGTTGGTGTTGATGCTGATCTTAGGTACAGCTATCTAATGAACAGTAGCATCAGTGGG
CTTGAGAACGCAGATGTTTTCCTTCTCGTTGGTACCCAGCCTAGAGTTGAAGCTGCAATGGTGAACGCTA
GGATCTGCAAGACAGTCCGTGCATCGAATGCCAAGGTTGCATACATTGGTCCGCCTGCAGATTTCAACTA
CGACTGCAAACACCTCGGGACTGGACCTGATACCCTCAAGGAAATCGCTGAGGGACGTCACCCGTTCTGC
TCGGCTCTCAAGAACGCCAAAAACCCTGCAATCATTGTTGGCGCTGGTCTCTTCAACAGAACCGACAAAG
ATGCTATCCTCGCTGCTGTTGAGTCCATTGCACAAGCCAACAATGTCGTCAGACCAGACTGGAACGGTCT
TAACTATCTCCTCCTGTACGCTGCTCAAGCAGCTGCCCTTGATCTTGGTCTAATTCAACAGTCTGCTAAA
GCCCTTGAGTCTGCGAAATTCGTCTACTTGATGGGAGCAGACGATGTAGATGTTGACAAGATTCCTAAAG
ATGCCTTTGTGGTTTACCAAGGTCACCATGGAGACAAAGCGGTTTACCGTGCAAACGTAATCCTCCCTGC
TTCGGCCTTCACCGAGAAAGAGGGAACCTATGAGAACACAGAAGGATTCACCCAACAGACTGTTCCCGCT
GTCCCGACGGTTGGTGATGCAAGAGATGACTGGAAGATTGTGAGAGCTTTGTCCGAGGTATCGGGTGTGA
ATCTTCCATACAACTCAATCGAAGGTGTTAGGTCTAGGATCAAGAGCGTCGCTCCAAATCTAGTCCACAC
AGATGAACGAGAGCCAGCTGCTTTTGGGCCATCATTGAAGCCTGAGTGCAAGGAGACAATGAGCACAACG
CCGTTCAAACCAGTGGTCGAGAATTTTTACATGACAAACGCCATCACGAGAGCATCAAAGATCATGGCAC
AGTGCAGTGCTGTCCTCTTGAAGAAGTGAGAGCTTTCTCTATTTCACTTTTTTTTTGTTTGCAAAAAAAA
AATAAAGGTACCGAGTATTTGTTTGCTCTCTTTGTTAAGGCCGAGTATCTGATTGTCTCTTTAATAAGCA
CATTATTAGATGCAAAACACTGCCGTATTGAATTTCATCTTTTAATTTGTTGGCA
Downstream Sequence
GTTAGATTCGATCTGATCCTCGATTGATTGATTGCTTTTATTATTGTTTGATTGATGATG
ACAGATTAGGTTGTTAAGTTTTCATGAAAAGTAGTCATTTTTGGGATCTTTGTTTTAAGA
GATTGTTTTCTAAACAGGGATGAAGATTAAGACCGATACGCCAATAGCAAAGAAGGCGAG
GGAAGGAGTGATGGAGTTCTTGTTGATGAACCATCCTCTGGATTGCCCTATATGTGACCA
AGGAGGAGAGTGTGATCTTCAGGACCAGTCTATGGCCTTTGGATCTGACAGAGGCCGTTT
CACCGAGATGAAAAGATCTGTCGTTGATAAGAATCTCGGTCCTCTTGTCAAGACTGTTAT
GACTCGGTGTATCCAGTGTACAAGGTTAGTGAAAGACAGTTTGATTCAAGTGAAATGCGA
TGCATAAGCTGTTCGTATTGATTATGTTTATGTCTTTGTAGGTGTGTACGATTTGCGTCG
GAAGTTGCTGGGGTTCAGGATCTTGGAATGCTAGGCCGTGGAAGCGGAGAAGAAATTGGA
ACTTATGTTGAAAAGCTTATGACTAGTGAACTCTCTGGAAATGTTATTGACATCTGTCCT
GTGGGAGCCTTGACCTCAAAGCCTTTTGCTTTTAAAGCCAGGAACTGGGAGTTGAAAGGA
ACTGAAACCATTGATGTTAGTGACGCCGTTGGTTCCAACATCCGTGTTGATAGTAGAGGA
CCTGAGGTGATGCGTATCATTCCACGTCTTAATGAGGTATGTTCAAAAACTTTGTTATTG
ATCTTTTGGTCTGGATGTTGAACCTGTGGTTGTTTTTGTTTAGGATATAAACGAAGAGTG
GATATCTGACAAAACCCGATTCAGCTATGACGGTCTGAAAAGGCAAAGGCTGAGCGACCC
TATGATTCGAGATTCAGATGGACGATTCAAGGCTGTGAGCTGGCGTGATGCCTTGGCCGT
TGTGGGTGATATCATCCATCAGGTCAAACCAGATGAGATTGTTGGAATAGCAGGTCAGCT
ATCTGATGCTGAATCCATGATGGTATTGAAGGACTTCGTTAACAGAATGGGTTCAGACAA
TGTCTGGTGTGAAGGAACAGCTGTTGGTGTTGATGCTGATCTTAGGTACAGCTATCTAAT
GAACAGTAGCATCAGTGGGCTTGAGAACGCAGATGTTTTCCTTCTCGTTGGTACCCAGCC
TAGAGTTGAAGCTGCAATGGTGAACGCTAGGATCTGCAAGACAGTCCGTGCATCGAATGC
CAAGGTTGCATACATTGGTCCGCCTGCAGATTTCAACTACGACTGCAAACACCTCGGGAC
TGGACCTGATACCCTCAAGGAAATCGCTGAGGGACGTCACCCGTTCTGCTCGGCTCTCAA
GAACGCCAAAAACCCTGCAATCATTGTTGGCGCTGGTCTCTTCAACAGAACCGACAAAGA
TGCTATCCTCGCTGCTGTTGAGTCCATTGCACAAGCCAACAATGTCGTCAGACCAGACTG
GAACGGTCTTAACTATCTCCTCCTGTACGCTGCTCAAGCAGCTGCCCTTGATCTTGGTCT
AATTCAACAGTCTGCTAAAGCCCTTGAGTCTGCGAAATTCGTCTACTTGATGGGAGCAGA
CGATGTAGATGTTGACAAGATTCCTAAAGATGCCTTTGTGGTTTACCAAGGTCACCATGG
AGACAAAGCGGTTTACCGTGCAAACGTAATCCTCCCTGCTTCGGCCTTCACCGAGAAAGA
GGGAACCTATGAGAACACAGAAGGATTCACCCAACAGACTGTTCCCGCTGTCCCGACGGT
TGGTGATGCAAGAGATGACTGGAAGATTGTGAGAGCTTTGTCCGAGGTATCGGGTGTGAA
TCTTCCATACAACTCAATCGAAGGTGTTAGGTCTAGGATCAAGAGCGTCGCTCCAAATCT
AGTCCACACAGATGAACGAGAGCCAGCTGCTTTTGGGCCATCATTGAAGCCTGAGTGCAA
GGAGACAATGAGCACAACGC
Pro Sequence
MGVGILASRAIRPASRLVRSQPSNLFLRTIVSKPELQSPEAAAVSQPEPP
KNQILPPRNPVGGARVHFTNAEDAIEVFVDGYAVKVPKGFTVLQACEVAG
VDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTP
IAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMK
RSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGMLGRGSGEEIG
TYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVSDAV
GSNIRVDSRGPEVMRIIPRLNEDINEEWISDKTRFSYDGLKRQRLSDPMI
RDSDGRFKAVSWRDALAVVGDIIHQVKPDEIVGIAGQLSDAESMMVLKDF
VNRMGSDNVWCEGTAVGVDADLRYSYLMNSSISGLENADVFLLVGTQPRV
EAAMVNARICKTVRASNAKVAYIGPPADFNYDCKHLGTGPDTLKEIAEGR
HPFCSALKNAKNPAIIVGAGLFNRTDKDAILAAVESIAQANNVVRPDWNG
LNYLLLYAAQAAALDLGLIQQSAKALESAKFVYLMGADDVDVDKIPKDAF
VVYQGHHGDKAVYRANVILPASAFTEKEGTYENTEGFTQQTVPAVPTVGD
ARDDWKIVRALSEVSGVNLPYNSIEGVRSRIKSVAPNLVHTDEREPAAFG
PSLKPECKETMSTTPFKPVVENFYMTNAITRASKIMAQCSAVLLKK
mRNA Sequence
CCTAGCCGCACAGATAGAAAACAACAAGAAGATCGAGATTATATTCACAAAGTGGAAGAAGGACAAGAAG
AAGAAGAAGAGATCCACAAACAAACGCAATGGGTGTAGGAATCTTAGCTTCTCGAGCGATTCGACCAGCT
TCTCGTCTTGTTCGATCTCAACCCTCCAATCTCTTCCTCCGCACCATCGTCTCGAAACCAGAGCTCCAAT
CTCCCGAAGCCGCCGCTGTCTCGCAGCCTGAGCCTCCGAAGAATCAGATCCTCCCTCCGAGGAACCCCGT
CGGCGGAGCGCGCGTCCATTTCACCAACGCCGAGGATGCGATCGAGGTCTTCGTTGATGGTTACGCGGTC
AAAGTCCCTAAAGGCTTCACTGTTCTGCAGGCCTGCGAGGTCGCCGGAGTTGATATCCCGAGGTTTTGTT
ACCATTCTCGCTTGTCGATTGCTGGAAACTGCAGGATGTGTCTTGTTGAGGTGGAGAAATCTCCCAAGCC
TGTAGCTTCATGTGCTATGCCTGCTCTCCCCGGGATGAAGATTAAGACCGATACGCCAATAGCAAAGAAG
GCGAGGGAAGGAGTGATGGAGTTCTTGTTGATGAACCATCCTCTGGATTGCCCTATATGTGACCAAGGAG
GAGAGTGTGATCTTCAGGACCAGTCTATGGCCTTTGGATCTGACAGAGGCCGTTTCACCGAGATGAAAAG
ATCTGTCGTTGATAAGAATCTCGGTCCTCTTGTCAAGACTGTTATGACTCGGTGTATCCAGTGTACAAGG
TGTGTACGATTTGCGTCGGAAGTTGCTGGGGTTCAGGATCTTGGAATGCTAGGCCGTGGAAGCGGAGAAG
AAATTGGAACTTATGTTGAAAAGCTTATGACTAGTGAACTCTCTGGAAATGTTATTGACATCTGTCCTGT
GGGAGCCTTGACCTCAAAGCCTTTTGCTTTTAAAGCCAGGAACTGGGAGTTGAAAGGAACTGAAACCATT
GATGTTAGTGACGCCGTTGGTTCCAACATCCGTGTTGATAGTAGAGGACCTGAGGTGATGCGTATCATTC
CACGTCTTAATGAGGATATAAACGAAGAGTGGATATCTGACAAAACCCGATTCAGCTATGACGGTCTGAA
AAGGCAAAGGCTGAGCGACCCTATGATTCGAGATTCAGATGGACGATTCAAGGCTGTGAGCTGGCGTGAT
GCCTTGGCCGTTGTGGGTGATATCATCCATCAGGTCAAACCAGATGAGATTGTTGGAATAGCAGGTCAGC
TATCTGATGCTGAATCCATGATGGTATTGAAGGACTTCGTTAACAGAATGGGTTCAGACAATGTCTGGTG
TGAAGGAACAGCTGTTGGTGTTGATGCTGATCTTAGGTACAGCTATCTAATGAACAGTAGCATCAGTGGG
CTTGAGAACGCAGATGTTTTCCTTCTCGTTGGTACCCAGCCTAGAGTTGAAGCTGCAATGGTGAACGCTA
GGATCTGCAAGACAGTCCGTGCATCGAATGCCAAGGTTGCATACATTGGTCCGCCTGCAGATTTCAACTA
CGACTGCAAACACCTCGGGACTGGACCTGATACCCTCAAGGAAATCGCTGAGGGACGTCACCCGTTCTGC
TCGGCTCTCAAGAACGCCAAAAACCCTGCAATCATTGTTGGCGCTGGTCTCTTCAACAGAACCGACAAAG
ATGCTATCCTCGCTGCTGTTGAGTCCATTGCACAAGCCAACAATGTCGTCAGACCAGACTGGAACGGTCT
TAACTATCTCCTCCTGTACGCTGCTCAAGCAGCTGCCCTTGATCTTGGTCTAATTCAACAGTCTGCTAAA
GCCCTTGAGTCTGCGAAATTCGTCTACTTGATGGGAGCAGACGATGTAGATGTTGACAAGATTCCTAAAG
ATGCCTTTGTGGTTTACCAAGGTCACCATGGAGACAAAGCGGTTTACCGTGCAAACGTAATCCTCCCTGC
TTCGGCCTTCACCGAGAAAGAGGGAACCTATGAGAACACAGAAGGATTCACCCAACAGACTGTTCCCGCT
GTCCCGACGGTTGGTGATGCAAGAGATGACTGGAAGATTGTGAGAGCTTTGTCCGAGGTATCGGGTGTGA
ATCTTCCATACAACTCAATCGAAGGTGTTAGGTCTAGGATCAAGAGCGTCGCTCCAAATCTAGTCCACAC
AGATGAACGAGAGCCAGCTGCTTTTGGGCCATCATTGAAGCCTGAGTGCAAGGAGACAATGAGCACAACG
CCGTTCAAACCAGTGGTCGAGAATTTTTACATGACAAACGCCATCACGAGAGCATCAAAGATCATGGCAC
AGTGCAGTGCTGTCCTCTTGAAGAAGTGAGAGCTTTCTCTATTTCACTTTTTTTTTGTTTGCAAAAAAAA
AATAAAGGTACCGAGTATTTGTTTGCTCTCTTTGTTAAGGCCGAGTATCTGATTGTCTCTTTAATAAGCA
CATTATTAGATGCAAAACACTGCCGTATTGAATTTCATCTTTTAATTTGTTGGCA