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Detail for ZS11_C04G57830.t1

Genome:
ZS11: ZS11_C04G57830.t1
ZS11_v0: BnaC04T0498400ZS
WE: WE_A04G24810.t1
WE_v0: BnaC04T0485300WE
Darmor: C04p59120.1_BnaDAR
BH: BnaC04T178500BH
Quinta: BnaC04T0441100QU
ZS2: BnaC04T481500ZS2
SW: BnaA04T212000SW
Express61: C04p040730.1_BnaEXP
Xiaoyun: BnaC04G0501000XY
P202: BnaC04G041320P202.1
BL: BnaC04T178500BH
TA: BnaC04T484100TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA05T143400RB
No2127: BnaC04T0456100NO
P130: BnaC04G019030P130.1
Length: 570
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1113.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013634327.1
NR E-value: Not available
NR Score: 1204.5
NR Annotation: XP_013634327.1 PREDICTED: laccase-3-like [Brassica oleracea var. oleracea]
SwissProt Protein: Q56YT0|LAC3_ARATH
SwissProt E-value: Not available
SwissProt Score: 1113.0
SwissProt Annotation: Laccase-3 OS=Arabidopsis thaliana OX=3702 GN=LAC3 PE=2 SV=2
CDS Sequence (1737 bp)
ATGGAGTCTCCCCGGCAATTCTCCTTAGTATCCTTCATCGCCCTTCTTGCTTACTTCGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCTACGCTCGAGGTCAGGAACGGTGACTCTCTCGCAATC
ACCGTCATCAACAGAGCTCGTTACAATATTAGCATTCACTGGCATGGAATCAGACAGCTGCGGAATCCGT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATAGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCAGAGCCACTGTCTACGGT
GCTCTTATCATTTACCCTCGTCTGGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCTAGCACAGTTCACTGGAGCAGCAGC
TAATGTTTCTGACGCTTACACAATCAATGGCCAACCAGGAGATCTCTATCGCTGTTCGCGGGCTGAAACA
GTCCGTTTCCCAATTTTCCCTGGTGAGACGGTCCAGCTCCGCGTCATCAACGCTGGATTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTGGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATTGGTCCCGGACAAACCACTAACGTCCTCCTCACGGCAAACCAGCGACCCGGT
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTTGACAACACAACCACAACTGCTA
TCTTAGAGTACGTCAACGCTCCCACTAGACGTGGTCGCGGCCGCGGTCAAATCGTTCCAGTTTTCCCGGT
TCTTCCGGGGTTCAACGATACCGCAACCGCAACCGCTTTCACCAACCGTCTGCGGTACTGGAAACGAGCT
CGAGTACCGCTCCAGGTCAACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCCAACC
CCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCCGCCAGCATAAACAACCAGTCCTTCGT
GCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGACTTC
CCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGGGGGCTATGGCAGCCCGTGAAAG
GGACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACAAGTATTGTCAC
GACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTTGGGAATTTT
AACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACACCTC
CAGGTGGTTGGGTTGCAATCCGGTTCGTAGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACATTGA
TTCACATTTGGGATGGGGTTTAGCGATGGTTTTCTTGGTGGAGAACGGAAGAGGACAGTTGCAATCAGTG
CAGGCTCCACCTTTGGATCTTCCAAGATGCTAA
Upstream Sequence
ATGGAGTCTCCCCGGCAATTCTCCTTAGTATCCTTCATCGCCCTTCTTGCTTACTTCGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCTACGCTCGAGGTCAGGAACGGTGACTCTCTCGCAATC
ACCGTCATCAACAGAGCTCGTTACAATATTAGCATTCACTGGCATGGAATCAGACAGCTGCGGAATCCGT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATAGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCAGAGCCACTGTCTACGGT
GCTCTTATCATTTACCCTCGTCTGGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCTAGCACAGTTCACTGGAGCAGCAGC
TAATGTTTCTGACGCTTACACAATCAATGGCCAACCAGGAGATCTCTATCGCTGTTCGCGGGCTGAAACA
GTCCGTTTCCCAATTTTCCCTGGTGAGACGGTCCAGCTCCGCGTCATCAACGCTGGATTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTGGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATTGGTCCCGGACAAACCACTAACGTCCTCCTCACGGCAAACCAGCGACCCGGT
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTTGACAACACAACCACAACTGCTA
TCTTAGAGTACGTCAACGCTCCCACTAGACGTGGTCGCGGCCGCGGTCAAATCGTTCCAGTTTTCCCGGT
TCTTCCGGGGTTCAACGATACCGCAACCGCAACCGCTTTCACCAACCGTCTGCGGTACTGGAAACGAGCT
CGAGTACCGCTCCAGGTCAACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCCAACC
CCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCCGCCAGCATAAACAACCAGTCCTTCGT
GCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGACTTC
CCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGGGGGCTATGGCAGCCCGTGAAAG
GGACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACAAGTATTGTCAC
GACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTTGGGAATTTT
AACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACACCTC
CAGGTGGTTGGGTTGCAATCCGGTTCGTAGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACATTGA
TTCACATTTGGGATGGGGTTTAGCGATGGTTTTCTTGGTGGAGAACGGAAGAGGACAGTTGCAATCAGTG
CAGGCTCCACCTTTGGATCTTCCAAGATGCTAA
Downstream Sequence
GGTAAGCTGGCTAATCTCTTACATTATAGCTTTTCTCTTTAGGTGAGTTTAGATGAATGA
TGATTTATACAAACTTGCGCGATGGTTTTGTGTCTGTTGTGGATGACTTTAGATCGAGCC
AAAACCAGTGAAGAGGCTGTGCAGAACTCACCAAAGCATCACGGTGAATGGTCAGTTCCC
TGGTCCTACGCTCGAGGTCAGGAACGGTGACTCTCTCGCAATCACCGTCATCAACAGAGC
TCGTTACAATATTAGCATTCACTGGTAACTAAAATGATTACATCACTGTAACTAACAAAC
ATATGTCTATGTTCTGCTCTGTTTTTATACTCTGTGTTTGCTCTGTTTTTTGGGACAGGC
ATGGAATCAGACAGCTGCGGAATCCGTGGGCTGATGGTCCAGAGTACATAACACAGTGTC
CGATCCGTCCAGGTCAAAGCTACACTTACAGATTCACAATAGAAGACCAAGAAGGTACTC
TTTGGTGGCATGCTCATAGCCGCTGGCTCAGAGCCACTGTCTACGGTGCTCTTATCATTT
ACCCTCGTCTGGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTCTTC
TCGGTAATATTTTATAATTTCTAATTATTCCAAATATCATTTTTCATGATCACTAATAAC
ATTTATCATGGGAACACAGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCTA
GCACAGTTCACTGGAGCAGCAGCTAATGTTTCTGACGCTTACACAATCAATGGCCAACCA
GGAGATCTCTATCGCTGTTCGCGGGCTGAAACAGTCCGTTTCCCAATTTTCCCTGGTGAG
ACGGTCCAGCTCCGCGTCATCAACGCTGGATTGAACCAAGAGCTCTTCTTCTCAGTCGCC
AACCATCAGCTCACAGTTGTGGAAACCGATTCCGCCTACACAAAACCATTCACCACTAGT
GTCATCATGATTGGTCCCGGACAAACCACTAACGTCCTCCTCACGGCAAACCAGCGACCC
GGTCGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTTGACAACACA
ACCACAACTGCTATCTTAGAGTACGTCAACGCTCCCACTAGACGTGGTCGCGGCCGCGGT
CAAATCGTTCCAGTTTTCCCGGTTCTTCCGGGGTTCAACGATACCGCAACCGCAACCGCT
TTCACCAACCGTCTGCGGTACTGGAAACGAGCTCGAGTACCGCTCCAGGTCAACGAGAAC
CTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCCAACCCCAACAGTCCGCGTTGC
CAGGGTCCAAACGGGACCCGGTTCGCCGCCAGCATAAACAACCAGTCCTTCGTGCTACCA
CGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGAC
TTCCCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGGGGGCTATGG
CAGCCCGTGAAAGGGACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTT
TTACAAGACACAAGTATTGTCACGACTGAGAATCATCCCATGCATCTTCACGGGTACCAA
TTCTACGTTGTCGGGTCTGGTTTTGGGAATTTTAACCCGAGAACTGACCCGGCTCGGTTT
AACCTATATGACCCACCGGAGAGGAACACCGTTGGTACACCTCCAGGTGGTTGGGTTGCA
ATCCGGTTCGTAGCTGATAATCCAGGTAATTAATTTACTTAAATTATGGATTAAGCGAGT
TAGCCTCAACCTTTAAACCATAACTTTGTTCTAATAACGCAGGAGCATGGTTTATGCATT
GTCACATTGATTCACATTTGGGATGGGGTTTAGCGATGGTTTTCTTGGTGGAGAACGGAA
GAGGACAGTTGCAATCAGTGCAGGCTCCACCTTTGGATCTTCCAAGATGCTAATATAGAT
CTCTAAAGGATTTGTggggT
Pro Sequence
MESPRQFSLVSFIALLAYFAFLASAELHVREFVIEPKPVKRLCRTHQSIT
VNGQFPGPTLEVRNGDSLAITVINRARYNISIHWHGIRQLRNPWADGPEY
ITQCPIRPGQSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIIYPRLGS
PYPFSMPKRDIPILLGEWWDRNPMDVLRLAQFTGAAANVSDAYTINGQPG
DLYRCSRAETVRFPIFPGETVQLRVINAGLNQELFFSVANHQLTVVETDS
AYTKPFTTSVIMIGPGQTTNVLLTANQRPGRYYMAARAYNSANAPFDNTT
TTAILEYVNAPTRRGRGRGQIVPVFPVLPGFNDTATATAFTNRLRYWKRA
RVPLQVNENLFFTVGLGLTNCSNPNSPRCQGPNGTRFAASINNQSFVLPR
RNSIMQAYYQGMPGIFTTDFPPVPPVQFDYTGNVSRGLWQPVKGTKAYKL
KYRANVQIVLQDTSIVTTENHPMHLHGYQFYVVGSGFGNFNPRTDPARFN
LYDPPERNTVGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMVFLV
ENGRGQLQSVQAPPLDLPRC
mRNA Sequence
ATGGAGTCTCCCCGGCAATTCTCCTTAGTATCCTTCATCGCCCTTCTTGCTTACTTCGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCTACGCTCGAGGTCAGGAACGGTGACTCTCTCGCAATC
ACCGTCATCAACAGAGCTCGTTACAATATTAGCATTCACTGGCATGGAATCAGACAGCTGCGGAATCCGT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATAGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCAGAGCCACTGTCTACGGT
GCTCTTATCATTTACCCTCGTCTGGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCTAGCACAGTTCACTGGAGCAGCAGC
TAATGTTTCTGACGCTTACACAATCAATGGCCAACCAGGAGATCTCTATCGCTGTTCGCGGGCTGAAACA
GTCCGTTTCCCAATTTTCCCTGGTGAGACGGTCCAGCTCCGCGTCATCAACGCTGGATTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTGGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATTGGTCCCGGACAAACCACTAACGTCCTCCTCACGGCAAACCAGCGACCCGGT
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTTGACAACACAACCACAACTGCTA
TCTTAGAGTACGTCAACGCTCCCACTAGACGTGGTCGCGGCCGCGGTCAAATCGTTCCAGTTTTCCCGGT
TCTTCCGGGGTTCAACGATACCGCAACCGCAACCGCTTTCACCAACCGTCTGCGGTACTGGAAACGAGCT
CGAGTACCGCTCCAGGTCAACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCCAACC
CCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCCGCCAGCATAAACAACCAGTCCTTCGT
GCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGACTTC
CCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGGGGGCTATGGCAGCCCGTGAAAG
GGACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACAAGTATTGTCAC
GACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTTGGGAATTTT
AACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACACCTC
CAGGTGGTTGGGTTGCAATCCGGTTCGTAGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACATTGA
TTCACATTTGGGATGGGGTTTAGCGATGGTTTTCTTGGTGGAGAACGGAAGAGGACAGTTGCAATCAGTG
CAGGCTCCACCTTTGGATCTTCCAAGATGCTAA