SEARCH

DETAIL

Detail for ZS11_C04G71230.t1

Genome:
ZS11: ZS11_C04G71230.t1
ZS11_v0: BnaC04T0611200ZS
WE: WE_C04G74360.t1
WE_v0: BnaC04T0596000WE
Darmor: C04p72240.1_BnaDAR
BH: BnaC04T681700BH
Quinta: BnaC04T0552500QU
ZS2: BnaC04T599000ZS2
SW: BnaC04T605500SW
Express61: C04p051830.1_BnaEXP
Xiaoyun: BnaA04G0300600XY
P202: BnaC04G050980P202.1
BL: BnaC04T681700BH
TA: BnaC04T603600TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaC04T665500RB
No2127: BnaC04T0568800NO
P130: BnaC04G072600P130.3
Length: 571
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1066.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013717033.1
NR E-value: Not available
NR Score: 1186.4
NR Annotation: XP_013717033.1 laccase-6-like [Brassica napus]
SwissProt Protein: Q9ZPY2|LAC6_ARATH
SwissProt E-value: Not available
SwissProt Score: 1066.0
SwissProt Annotation: Laccase-6 OS=Arabidopsis thaliana OX=3702 GN=LAC6 PE=2 SV=1
CDS Sequence (1740 bp)
ATGGCCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAAGGTGTAATGCTGCAACTAGAATCTACCAGTTCAAGGTACAAACAAAGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGAAAGTTCCCTGGCCTTGCGATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCATATAATGCCACAATTCATTGGCATGGTATTAAGCAAA
AGCTATCTTGTTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGATTCAC
ATACAACTTCACAGTGACGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAGCT
ACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAACCCTTCAAAG
AGCATACAATTCTCCTAGGAGAATATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAGAG
TGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATTAATGGTCAGCCAGGACCTAACTACAATTGCTCC
TCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTAAGGCTGATAAACGCTGGCA
TCAACATGGAGAGCTTCTTCACCATAGCCAATCACAGGTTAACCATAGTGGAAGTAGACGGCGAGTACAC
CAAACCTTTCACAACAGAGCGTGTGATGCTTGTGCCTGGACAGACAATGAACGTTCTCCTCACAGCTGAT
CAACCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACACA
CTTCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTACC
TGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTCTAAACAAGGTTGACGTT
CCAAAAGATGTCGATGTCGATGCTCGTCTCTTCATCACGATTGGGATAAATGTAAACAAGTGTAACTCTG
AAGACCCAAACAACAAGTGCCAAGGTCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTT
CGTGGAACCTAAAGTATCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGGTACTTCACTCTAGATTTC
CCAACAGCACCAGAAAAGTCTTATGACTTCGTCAATGGAGCGCCCAGTGATATAGCCAATGACACGCAGG
CAGCAAACGGGACCAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGG
CACTCTCACAACTGAAAATCATCCGATTCATCTCCACGGGCATAGCTTTTACGTTATTGGCTATGGCACA
GGGAACTATGATCAACGAACAGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCC
CTGTAGGAGGATGGGCTGCGATTCGTTTTGTTGCTGACAATCCAGGGCTATGGCTATTGCATTGCCATTT
TGATATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAATGGCAAGACGGTGGTTGAGAGT
CTACCTCAACCTCCTGCAGACCTACCAAAGTGCTAG
Upstream Sequence
ATGGCCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAAGGTGTAATGCTGCAACTAGAATCTACCAGTTCAAGGTACAAACAAAGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGAAAGTTCCCTGGCCTTGCGATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCATATAATGCCACAATTCATTGGCATGGTATTAAGCAAA
AGCTATCTTGTTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGATTCAC
ATACAACTTCACAGTGACGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAGCT
ACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAACCCTTCAAAG
AGCATACAATTCTCCTAGGAGAATATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAGAG
TGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATTAATGGTCAGCCAGGACCTAACTACAATTGCTCC
TCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTAAGGCTGATAAACGCTGGCA
TCAACATGGAGAGCTTCTTCACCATAGCCAATCACAGGTTAACCATAGTGGAAGTAGACGGCGAGTACAC
CAAACCTTTCACAACAGAGCGTGTGATGCTTGTGCCTGGACAGACAATGAACGTTCTCCTCACAGCTGAT
CAACCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACACA
CTTCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTACC
TGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTCTAAACAAGGTTGACGTT
CCAAAAGATGTCGATGTCGATGCTCGTCTCTTCATCACGATTGGGATAAATGTAAACAAGTGTAACTCTG
AAGACCCAAACAACAAGTGCCAAGGTCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTT
CGTGGAACCTAAAGTATCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGGTACTTCACTCTAGATTTC
CCAACAGCACCAGAAAAGTCTTATGACTTCGTCAATGGAGCGCCCAGTGATATAGCCAATGACACGCAGG
CAGCAAACGGGACCAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGG
CACTCTCACAACTGAAAATCATCCGATTCATCTCCACGGGCATAGCTTTTACGTTATTGGCTATGGCACA
GGGAACTATGATCAACGAACAGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCC
CTGTAGGAGGATGGGCTGCGATTCGTTTTGTTGCTGACAATCCAGGGCTATGGCTATTGCATTGCCATTT
TGATATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAATGGCAAGACGGTGGTTGAGAGT
CTACCTCAACCTCCTGCAGACCTACCAAAGTGCTAG
Downstream Sequence
GCAAGTATCAACAATATTCAAATTTATGTGTGTATGAACTTGTTTCTCTGTTTTTATTAT
TCCTACTAAACAGAGTTCTAATTTCTAACAGGTACAAACAAAGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGAAAGTTCCCTGGCCTTGCGATAACCGCTCA
AGAAGATGACAACATTGTCGTTAATGTTATCAACATGACCCCATATAATGCCACAATTCA
TTGGTATGCATCTACATATGTACACAAAGCTTAGAAGAAAAATTAGACTAACAAGGGTTG
TTTCTGTTATATACAGGCATGGTATTAAGCAAAAGCTATCTTGTTGGTACGATGGTCCAT
CTTACATCACACAATGTCCAATTCAGAGCGGACAGAGATTCACATACAACTTCACAGTGA
CGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAGCTACTGTAT
ACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAACCCTTCA
AAGAGCATACAATTCTCCTAGGTAATCTATAAAGCTATTCTCTTTCACTAGTTGCCTTTA
CTGAGTTGTTTGTCATAATCTAGGAGAATATTGGCTTAAGAACGTGGTGGAGCTTGAAAA
ACATGTACTGGAGAGTGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATTAATGGTCA
GCCAGGACCTAACTACAATTGCTCCTCTAAAGGTAATACATATGAGACTGAATATGATTA
TTGATCCTTGTTTTAATATCTTTATATTTCAGATGTTTATGAACTTGAGATAGTGCCAAG
GAAGACATACCTGCTAAGGCTGATAAACGCTGGCATCAACATGGAGAGCTTCTTCACCAT
AGCCAATCACAGGTTAACCATAGTGGAAGTAGACGGCGAGTACACCAAACCTTTCACAAC
AGAGCGTGTGATGCTTGTGCCTGGACAGACAATGAACGTTCTCCTCACAGCTGATCAACC
CATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCA
ACACACTTCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTC
ACCAGCTAAGTTACCTGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCT
CAGAAGTCTAAACAAGGTTGACGTTCCAAAAGATGTCGATGTCGATGCTCGTCTCTTCAT
CACGATTGGGATAAATGTAAACAAGTGTAACTCTGAAGACCCAAACAACAAGTGCCAAGG
TCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTTCGTGGAACCTAAAGT
ATCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGGTACTTCACTCTAGATTTCCCAAC
AGCACCAGAAAAGTCTTATGACTTCGTCAATGGAGCGCCCAGTGATATAGCCAATGACAC
GCAGGCAGCAAACGGGACCAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCAT
CTTCCAGAACACTGGCACTCTCACAACTGAAAATCATCCGATTCATCTCCACGGGCATAG
CTTTTACGTTATTGGCTATGGCACAGGGAACTATGATCAACGAACAGCACGGTTTAACCT
GGAGGATCCTCCTTACTTGAACACTATTGGAGTCCCTGTAGGAGGATGGGCTGCGATTCG
TTTTGTTGCTGACAATCCAGGTATTCTTCTTATTCACAACACTCCTTAGCATCACAGACA
TTTTGCTGATAAACATATTCTTCTTCTTTTAATGAAACAGGGCTATGGCTATTGCATTGC
CATTTTGATATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAATGGCAAG
ACGGTGGTTGAGAGTCTACCTCAACCTCCTGCAGACCTACCAAAGTGCTAGCTTCACTGA
AATTAGCAAATGGTGACAGG
Pro Sequence
MASSSVSSLLRLSFCLFILQVMNIGRCNAATRIYQFKVQTKRLTRLCQTK
EIVTINGKFPGLAITAQEDDNIVVNVINMTPYNATIHWHGIKQKLSCWYD
GPSYITQCPIQSGQRFTYNFTVTQQKGTFFWHAHFSWLRATVYGPLIVYP
KANVPYPFKKPFKEHTILLGEYWLKNVVELEKHVLESGGPPPPADAFTIN
GQPGPNYNCSSKDVYELEIVPRKTYLLRLINAGINMESFFTIANHRLTIV
EVDGEYTKPFTTERVMLVPGQTMNVLLTADQPIGRYSIAMGPYESAKNVK
FQHTSAIASLRYFGAFPNSVASPAKLPVFNDNIAVKTVMDGLRSLNKVDV
PKDVDVDARLFITIGINVNKCNSEDPNNKCQGPRQGRLAASMNNISFVEP
KVSILEAYYKKLEGYFTLDFPTAPEKSYDFVNGAPSDIANDTQAANGTRA
MVFEYGSRIQIIFQNTGTLTTENHPIHLHGHSFYVIGYGTGNYDQRTARF
NLEDPPYLNTIGVPVGGWAAIRFVADNPGLWLLHCHFDIHQTWGMSTMFI
VKNGKTVVESLPQPPADLPKC
mRNA Sequence
ATGGCCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAAGGTGTAATGCTGCAACTAGAATCTACCAGTTCAAGGTACAAACAAAGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGAAAGTTCCCTGGCCTTGCGATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCATATAATGCCACAATTCATTGGCATGGTATTAAGCAAA
AGCTATCTTGTTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGATTCAC
ATACAACTTCACAGTGACGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAGCT
ACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAACCCTTCAAAG
AGCATACAATTCTCCTAGGAGAATATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAGAG
TGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATTAATGGTCAGCCAGGACCTAACTACAATTGCTCC
TCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTAAGGCTGATAAACGCTGGCA
TCAACATGGAGAGCTTCTTCACCATAGCCAATCACAGGTTAACCATAGTGGAAGTAGACGGCGAGTACAC
CAAACCTTTCACAACAGAGCGTGTGATGCTTGTGCCTGGACAGACAATGAACGTTCTCCTCACAGCTGAT
CAACCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACACA
CTTCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTACC
TGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTCTAAACAAGGTTGACGTT
CCAAAAGATGTCGATGTCGATGCTCGTCTCTTCATCACGATTGGGATAAATGTAAACAAGTGTAACTCTG
AAGACCCAAACAACAAGTGCCAAGGTCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTT
CGTGGAACCTAAAGTATCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGGTACTTCACTCTAGATTTC
CCAACAGCACCAGAAAAGTCTTATGACTTCGTCAATGGAGCGCCCAGTGATATAGCCAATGACACGCAGG
CAGCAAACGGGACCAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGG
CACTCTCACAACTGAAAATCATCCGATTCATCTCCACGGGCATAGCTTTTACGTTATTGGCTATGGCACA
GGGAACTATGATCAACGAACAGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCC
CTGTAGGAGGATGGGCTGCGATTCGTTTTGTTGCTGACAATCCAGGGCTATGGCTATTGCATTGCCATTT
TGATATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAATGGCAAGACGGTGGTTGAGAGT
CTACCTCAACCTCCTGCAGACCTACCAAAGTGCTAG