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Detail for ZS11_C05G06400.t1

Genome:
ZS11: ZS11_C05G06400.t1
ZS11_v0: BnaC05T0063200ZS
WE: WE_C05G06770.t1
WE_v0: BnaC05T0062200WE
Darmor: C05p06590.1_BnaDAR
BH: BnaC05T064000BH
Quinta: BnaC05T0029200QU
ZS2: BnaC05T060000ZS2
SW: BnaC05T063400SW
Express61: C05p005980.1_BnaEXP
Xiaoyun: BnaC05G0058900XY
P202: BnaC05G004560P202.1
BL: BnaC05T064000BH
TA: BnaC05T060500TA
Da-Ae: Not available
RB: BnaC05T065200RB
No2127: BnaC05T0058100NO
P130: BnaC05G005640P130.2
Length: 138
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: GO:0005749(mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013586152.1
NR E-value: 3.900000e-75
NR Score: 285.8
NR Annotation: XP_013586152.1 PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Brassica oleracea var. oleracea]
SwissProt Protein: Q941A6|SDH6_ARATH
SwissProt E-value: 2.210000e-88
SwissProt Score: 256.0
SwissProt Annotation: Succinate dehydrogenase subunit 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH6 PE=1 SV=1
CDS Sequence (422 bp)
ATGGGAGATTCGAGTTCATTTGTGGATGGAATCAAGGGGTTCTGGGAGGAGAGGTTGTCGTTCCTGGAGA
ATTACACGAGGTTCACCAAACGCGATACGCCTCTTCCTTCTTGGTCTTCCTCCGACGTTGAAGAGTTTAT
AGCTTCCGATCCCCTTCATGGACCCACCCTGAAAACTGCTAGGGAAGCTGCTACTTTTGGTGTTACCGGA
GCTGCTCTTGGAGCTGTTTCTACTGCCGCTTTTGCCTGGAAATACTCGAGGAGTCCACATGGTACTGCAT
TGTCCTTCTTAGGAGGAGGTGTTTTCGGTTGGACCTTTGGGCAAGAAGTCGCCAACCACACCTTGCAACT
CTATAAGTTGGACACAATGGCGGCTCAAGTTACGTTCATGGAATGGTGGGAGCGCAAGTCTCAATGA
Upstream Sequence
GAAAGCAATTGTTTGTTTTGTTTATCGATTTCGATCTGAGGAAAGAGAGAAAAAAAGTGGGGAGAAGAAT
CAAAGATGGGAGATTCGAGTTCATTTGTGGATGGAATCAAGGGGTTCTGGGAGGAGAGGTTGTCGTTCCT
GGAGAATTACACGAGGTTCACCAAACGCGATACGCCTCTTCCTTCTTGGTCTTCCTCCGACGTTGAAGAG
TTTATAGCTTCCGATCCCCTTCATGGACCCACCCTGAAAACTGCTAGGGAAGCTGCTACTTTTGGTGTTA
CCGGAGCTGCTCTTGGAGCTGTTTCTACTGCCGCTTTTGCCTGGAAATACTCGAGGAGTCCACATGGTAC
TGCATTGTCCTTCTTAGGAGGAGGTGTTTTCGGTTGGACCTTTGGGCAAGAAGTCGCCAACCACACCTTG
CAACTCTATAAGTTGGACACAATGGCGGCTCAAGTTACGTTCATGGAATGGTGGGAGCGCAAGTCTCAAT
GAAGGTTTTGAATCCAAAATAACAAAGACGCTTGCTATCTTGCAAACAGCTTGAAATGCAATAATAGTTA
AATCCATTTCCAGACTTTATCTTTTCAACCTTTTTTTTATTACGTTCTCAATCTTGGAACATGTTTTGTT
TTCCTTTGTCTCAATAATACAACAC
Downstream Sequence
GTATTTCCTTATGGATGATTTTTTTTGTTTGATTCATTATCTATGGGATTAGCTATTGTC
ATACATCTGGGTAGAGTTTTTGGCTTTTTGATCTTTAGGAATAGACCATCATTCCAGGCA
ATGGAGTTAAGAGATAATTTGACTGTAGAAATCTTGGTGAAAGCGTGAAGAACACTGGAG
TTAATAGATAGACTATAGAAAGAATTTGATCTGTGTCGTTGGTCAAAGTTTGGTTAACAT
TGTGAAACATCTCTTTCCAGCTGAAAACTGCTAGGGAAGCTGCTACTTTTGGTGTTACCG
GAGCTGCTCTTGGAGCTGTTTCTACTGCCGCTTTTGCCTGGAAATACTCGAGGAGTCCAC
ATGGTAAAGTCATTTTAATCCTTGATTAAATGATAATATTCAGCAAGTGAACTATATACT
TAGTTTTTCATATTGCAAACTACTGATCTGCTTTGTTTCGAATTGTAGTTGTATTTTCTA
TTGGTAATTTCAACACCTCTCTAATTTCTGCTGGTGGTGCGACAGGTACTGCATTGTCCT
TCTTAGGAGGAGGTGTTTTCGGTTGGACCTTTGGGCAAGAAGTCGCCAACCACACCTTGC
AACTCTATAAGTTGGACACAATGGCGGCTCAAGTTACGTTCATGGAATGGTGGGAGCGCA
AGTCTCAATGAAGGTTTTGAATCCAAAATAACAAAGACGCTTGCTATCTTGCAAACAGCT
TGAAATGCAATAATAGTTAAATCCATTTCCAGACTTTATCTTTTCAACCTTTTTTTTATT
ACGTTCTCAATCTTGGAACATGTTTTGTTTTCCTTTGTCTCAATAATACAACACGCCCCA
AGAGTGTTTTGAAAATTTGCGGAACTGAATTTGAAAGAAACCCAGTAATGTATTGGTCTC
AAAATATTGGGACTTGAAGATTAATAAATAAATAGACTTTTGAAGCTTATATATAGCATA
CAACAAGCTGAGAGATCCAGCTGGAAGGTGTACTCCACTCTATTTGAAAGAATTGAAGAA
GCTCGCAGTATCTGCAAGTGCAACGATGAAGGAGTCAACGTCTTCCTTCGTGTTGTAAAA
GTAGAGGCTGGCGCGTGCACTTGCATTCACTCCAAGATACCGGTGGAGTGGCTGAGCGCA
GTGGTGTCCTGACCTTATCGCAACTCCATGCTGCAACATACAATAGTTTCTTTTAGTTTT
CATCCTAAAATAGATATTCTAATGAGAGAACAAAGTAGGAAACGAGAAGTTAATGTGCCC
TTATCCTTCTCTGAGGTACTAACTTTTCACCAGAGAATAAATATTCATTGAAGATAAGAG
AAAAAACAGCATGTGATGGCACAGATAGCTCCCATTTATAACATACCTGTTGATCAAGGA
AGGTTGCCAAATCAGTTGGGTGCAGTCCCTCCACATTGAAGGAACAAAGAGCTGCCCTTT
GAACACTTTCAGAAGGCCTTGGGCCGTATATCCGGACATCAGGCACTGAAGCCAGTTTCT
CGTACAGGTACTTAGCAAGCTCGACCTGGACGACATAAGAAATTATAAATATTATTAGAG
AAAGTAAATATGAAAATCAAAAACATCTTATCTAGTCCTCCTAGAAAATAAGTGCGCCTG
ACCATACTTCAGTGACTGGAAAAATCTACTGTATGTAAATAGTCCACTACGGTCATTGAT
GTCAAGTTGTATCGAACCTCATATTCATGGATTTTCGGCATGCCAATATCTGACAAGTAA
TCACAGGCTGCTCCAAGGGCAATTGCTTCACCAATTGCAGGTGTTCCAGCTTCAAATCTG
GTACAATATCGAATCTACTTATTCACAAACTGCAGCAAATATACAAATAAGCAAGTAACG
TAAGTAGAAACCAAACCTCGATGGAGGTTCCGCATAAGTCGAATGATCTAGAAATACATC
TGAGATCATTTCTCCGCCACCTTAAATATCATTGGGTTCTTAATTAAGTCCACTCCTTGA
GTAAACATATAAAATGATTG
Pro Sequence
MGDSSSFVDGIKGFWEERLSFLENYTRFTKRDTPLPSWSSSDVEEFIASD
PLHGPTLKTAREAATFGVTGAALGAVSTAAFAWKYSRSPHGTALSFLGGG
VFGWTFGQEVANHTLQLYKLDTMAAQVTFMEWWERKSQ
mRNA Sequence
GAAAGCAATTGTTTGTTTTGTTTATCGATTTCGATCTGAGGAAAGAGAGAAAAAAAGTGGGGAGAAGAAT
CAAAGATGGGAGATTCGAGTTCATTTGTGGATGGAATCAAGGGGTTCTGGGAGGAGAGGTTGTCGTTCCT
GGAGAATTACACGAGGTTCACCAAACGCGATACGCCTCTTCCTTCTTGGTCTTCCTCCGACGTTGAAGAG
TTTATAGCTTCCGATCCCCTTCATGGACCCACCCTGAAAACTGCTAGGGAAGCTGCTACTTTTGGTGTTA
CCGGAGCTGCTCTTGGAGCTGTTTCTACTGCCGCTTTTGCCTGGAAATACTCGAGGAGTCCACATGGTAC
TGCATTGTCCTTCTTAGGAGGAGGTGTTTTCGGTTGGACCTTTGGGCAAGAAGTCGCCAACCACACCTTG
CAACTCTATAAGTTGGACACAATGGCGGCTCAAGTTACGTTCATGGAATGGTGGGAGCGCAAGTCTCAAT
GAAGGTTTTGAATCCAAAATAACAAAGACGCTTGCTATCTTGCAAACAGCTTGAAATGCAATAATAGTTA
AATCCATTTCCAGACTTTATCTTTTCAACCTTTTTTTTATTACGTTCTCAATCTTGGAACATGTTTTGTT
TTCCTTTGTCTCAATAATACAACAC