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Detail for ZS11_C05G17220.t1

Genome:
ZS11: ZS11_C05G17220.t1
ZS11_v0: BnaC05T0160700ZS
WE: WE_C05G18220.t1
WE_v0: BnaC05T0155400WE
Darmor: C05p17510.1_BnaDAR
BH: BnaC05T169100BH
Quinta: BnaC05T0119200QU
ZS2: BnaC05T156300ZS2
SW: BnaC05T165700SW
Express61: C05p015220.1_BnaEXP
Xiaoyun: BnaC05G0155300XY
P202: BnaC05G012360P202.1
BL: BnaC05T169100BH
TA: BnaC05T162000TA
Da-Ae: Not available
RB: BnaC05T167800RB
No2127: BnaC05T0155500NO
P130: BnaC05G015220P130.1
Length: 299
KOG ID: KOG2969
KOG E-value: 6.400000e-142
KOG Score: 403.0
KOG Annotation: Function unknown
Biological Process: GO:0006744(ubiquinone biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008289(lipid binding)
KEGG Ortholog: K18587 COQ9; ubiquinone biosynthesis protein COQ9
NR Protein: XP_013698211.1
NR E-value: 1.300000e-165
NR Score: 587.4
NR Annotation: XP_013698211.1 ubiquinone biosynthesis protein COQ9, mitochondrial [Brassica napus]
SwissProt Protein: Q5RJV0|COQ9_XENTR
SwissProt E-value: 7.350000e-44
SwissProt Score: 155.0
SwissProt Annotation: Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Xenopus tropicalis OX=8364 GN=coq9 PE=2 SV=1
CDS Sequence (912 bp)
ATGTTCCGAACGGCGGCGAGACGTCTTCTCGGAGCTGGTTTCACAACCAGCCGCCTCCTCCGATTACCCA
AGCCCAGGCCCACCACCATCATCCCTTACTCTTACTGCACTTCCTCCACCGAATCGCCGATTGGTAATCA
ATCCGTAAACCCTAATCAATCGGATACGGCTAGAGAGGAAGGGCATCGTCGAGATGAGAGCAGCAGGAAA
CCGAGAGCTGAGTTTGAGGAAGAGCAGGCTCGTGTCCTCGCCGCGTCTCTTCGCCACGTGCCGAGGTTAG
GTTGGACGGAGGAAGCCATGATTGCTGGTTCCAGAGACGTTGGTGTGTCTCCTTCCATTGTTGGCTCTTT
CTCCAGGAAAGAAGCTGCTCTTGTTGAGTACTTCATGGATGATTGCTTGCAACTCCTTATCGATAGAGTA
GACTCTGGGTTGGATTTGCAAAACCTGATTCCAAGTGAACGTGTTTCGAAGCTCGTCAGTATTCGCTTAG
AGATGCAGATTCCTTACATGTCCAAATGGCCTCAAGCTCTTAGTATTCAAGCCCATCCGGTGAATGTTCC
GACGAGTTTTAAGCAGCGGGCGATGTTGGTTGATGAGATATGGCACACTGTTGGTGATGGAGCCTCGGAT
TTGGATTGGTATGTCAAGCGCACTGTTCTTGGAGGAGTTTACTCGACCACCGAGATTTACATGCTTACAG
ATGACTCCCCAGAGTATCGTGATACATGGGCATTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAA
GAAGAGCATACAAGAGGCCAAGTATTTTGCACAAGACATAGGAGCTGGAGTTGGGAAATCGTTTCAAGGA
CTCATGAATGGAGTTATGCAGACCATGTCCACAAGGGGTGGTCGTAGCTCTGCGTTTTGA
Upstream Sequence
GATTTATTCAATCAGCATCGATCACTACTGACAAGCAGGGATCAATCAAAGGAAGAAGCTCTTTTAGTTT
CTGCGTGGCAACGATCTCATCCACGTGTCACCAAAACTCAAACCCCTCACTCCGGCAATGTTCCGAACGG
CGGCGAGACGTCTTCTCGGAGCTGGTTTCACAACCAGCCGCCTCCTCCGATTACCCAAGCCCAGGCCCAC
CACCATCATCCCTTACTCTTACTGCACTTCCTCCACCGAATCGCCGATTGGTAATCAATCCGTAAACCCT
AATCAATCGGATACGGCTAGAGAGGAAGGGCATCGTCGAGATGAGAGCAGCAGGAAACCGAGAGCTGAGT
TTGAGGAAGAGCAGGCTCGTGTCCTCGCCGCGTCTCTTCGCCACGTGCCGAGGTTAGGTTGGACGGAGGA
AGCCATGATTGCTGGTTCCAGAGACGTTGGTGTGTCTCCTTCCATTGTTGGCTCTTTCTCCAGGAAAGAA
GCTGCTCTTGTTGAGTACTTCATGGATGATTGCTTGCAACTCCTTATCGATAGAGTAGACTCTGGGTTGG
ATTTGCAAAACCTGATTCCAAGTGAACGTGTTTCGAAGCTCGTCAGTATTCGCTTAGAGATGCAGATTCC
TTACATGTCCAAATGGCCTCAAGCTCTTAGTATTCAAGCCCATCCGGTGAATGTTCCGACGAGTTTTAAG
CAGCGGGCGATGTTGGTTGATGAGATATGGCACACTGTTGGTGATGGAGCCTCGGATTTGGATTGGTATG
TCAAGCGCACTGTTCTTGGAGGAGTTTACTCGACCACCGAGATTTACATGCTTACAGATGACTCCCCAGA
GTATCGTGATACATGGGCATTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAGAGCATACAA
GAGGCCAAGTATTTTGCACAAGACATAGGAGCTGGAGTTGGGAAATCGTTTCAAGGACTCATGAATGGAG
TTATGCAGACCATGTCCACAAGGGGTGGTCGTAGCTCTGCGTTTTGAAGAAATATGTCACCTTCACACAA
TAAATTTGCTTTATCCTTTTATGATTATCTAGTATTTTGAGTTTGAGATGTGCTCTAATAATGATATTAG
TATGTATGACTTGAAGTGTATAAACTTTTATTCAACACGAGTCGCGAATCACTATGCTCTCTTACCCGGG
ACTGAAAGGACCAAGAAGAGATGCCTTAATGGTTTTGGTTTCTGCTGAAAGACATTACCGGGTCGTTCGT
TTTCTCGTCTGTTATTTCTTTCTAGCTGTTCCATCTATGTATTCATCTAGATTTTAAGGGGCTA
Downstream Sequence
GGTGTGTGTGGTATTCTTCTCCAAATTCTTCTTTTTCAATCTTTAATGTGTTTTTTTTTT
TTTTTTTGTGAGTTTGGTGCAGCCGAGGTTAGGTTGGACGGAGGAAGCCATGATTGCTGG
TTCCAGAGACGTTGGTGTGTCTCCTTCCATTGTTGGCTCTTTCTCCAGGAAAGAAGCTGC
TCTTGTTGAGGTTAAATCTCACTTTCTAGAGAATCATGAAAAGTTTTAAACTTTTTGACT
CTTGTTGTTGACTTTCGTTCTTGCTCAGTACTTCATGGATGATTGCTTGCAACTCCTTAT
CGATAGAGTAGACTCTGGGTTGGATTTGCAAAACCTGATTCCAAGTGAACGTGTTTCGAA
GCTCGTCAGTATTCGCTTAGAGATGCAGATTCCTTACATGTCCAAATGGCCTCAAGCTCT
TAGTATTCAAGTAAGTTTCTTTTTGTGATAAAGTCTTTTTTTAAGCAAGTCCTGATGTTT
GAATGGATTTTATTTGGCAAAAAAAAAACAGGCCCATCCGGTGAATGTTCCGACGAGTTT
TAAGCAGCGGGCGATGTTGGTTGATGAGATATGGCACACTGTTGGTGATGGAGCCTCGGA
TTTGGATTGGTATGTCAAGCGCACTGTTCTTGGAGGAGTTTACTCGACCACCGAGATTTA
CATGCTTACAGATGACTCCCCAGGTCCTCAAGTCCTCTTTTGGATACCTTGTTATGTGTT
TGAAGAAATATAACATAATCATCGTTTCATGTTGAGCAGAGTATCGTGATACATGGGCAT
TCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAGAGCATACAAGAGGTAATAT
AAAACCTTTCTCGCTACGCTTGAAATTGAAAGGGATTTAAATTCACTTATTGTGTGGCAG
GCCAAGTATTTTGCACAAGACATAGGAGCTGGAGTTGGGAAATCGTTTCAAGGACTCATG
AATGGAGTTATGCAGACCATGTCCACAAGGGGTGGTCGTAGCTCTGCGTTTTGAAGAAAT
ATGTCACCTTCACACAATAAATTTGCTTTATCCTTTTATGATTATCTAGTATTTTGAGTT
TGAGATGTGCTCTAATAATGATATTAGTATGTATGACTTGAAGTGTATAAACTTTTATTC
AACACGAGTCGCGAATCACTATGCTCTCTTACCCGGGACTGAAAGGACCAAGAAGAGATG
CCTTAATGGTTTTGGTTTCTGCTGAAAGACATTACCGGGTCGTTCGTTTTCTCGTCTGTT
ATTTCTTTCTAGCTGTTCCATCTATGTATTCATCTAGATTTTAAGGGGCTATTCGTTTTT
TCCATgtatatagtggatttatgttcgttttttttttttttttctatttaataaataaat
taaaaatatactactgttttatattaattttaactatactaatttttattatttagccta
aaatatatttacactgaaattattctaaatgtaaattttgacatttataaattttcattt
catataaatttataatttttatttAAATTGCATTAAAACTTAACTATAACTATAGATTCT
AATAAAACTCAAAGTAGAAACTCAAATTTGAATAAACTTCCAAACAACTCAAAGTAGAAA
CTTAAATTTTATAAAATGAAATTGAAAAGATAAAAAAGGCAATTGTAAGAGAATCATGTA
CTCATTGCTATATTAAAACAAGTTTTCATTGCTAAATCAAAATGTTTTCAACAAATAATC
ATCTTGAATCTTCACCCTCTTCACTCATCTGCTCCATTACTATCAAGACAACCCAAAAAG
AGAAACAACCTTGCCATATAAAAAGGTCTTGGTCAGTCAATCAACAATGGGACAATCAAA
GACATTCACAACAAAGCCAGGAGAAATGTTTTATTTCTCTCACTAAAATGCCATAAACCG
GAACATGAAATAGAACTTTCAAGCGATCACAAATGGTTTATTCATAAAAAACAGAAGGAT
AGCACAATTACACATAAACC
Pro Sequence
MFRTAARRLLGAGFTTSRLLRLPKPRPTTIIPYSYCTSSTESPIGNQSVN
PNQSDTAREEGHRRDESSRKPRAEFEEEQARVLAASLRHVPRLGWTEEAM
IAGSRDVGVSPSIVGSFSRKEAALVEYFMDDCLQLLIDRVDSGLDLQNLI
PSERVSKLVSIRLEMQIPYMSKWPQALSIQAHPVNVPTSFKQRAMLVDEI
WHTVGDGASDLDWYVKRTVLGGVYSTTEIYMLTDDSPEYRDTWAFLDDRV
KDAFDLKKSIQEAKYFAQDIGAGVGKSFQGLMNGVMQTMSTRGGRSSAF
mRNA Sequence
GATTTATTCAATCAGCATCGATCACTACTGACAAGCAGGGATCAATCAAAGGAAGAAGCTCTTTTAGTTT
CTGCGTGGCAACGATCTCATCCACGTGTCACCAAAACTCAAACCCCTCACTCCGGCAATGTTCCGAACGG
CGGCGAGACGTCTTCTCGGAGCTGGTTTCACAACCAGCCGCCTCCTCCGATTACCCAAGCCCAGGCCCAC
CACCATCATCCCTTACTCTTACTGCACTTCCTCCACCGAATCGCCGATTGGTAATCAATCCGTAAACCCT
AATCAATCGGATACGGCTAGAGAGGAAGGGCATCGTCGAGATGAGAGCAGCAGGAAACCGAGAGCTGAGT
TTGAGGAAGAGCAGGCTCGTGTCCTCGCCGCGTCTCTTCGCCACGTGCCGAGGTTAGGTTGGACGGAGGA
AGCCATGATTGCTGGTTCCAGAGACGTTGGTGTGTCTCCTTCCATTGTTGGCTCTTTCTCCAGGAAAGAA
GCTGCTCTTGTTGAGTACTTCATGGATGATTGCTTGCAACTCCTTATCGATAGAGTAGACTCTGGGTTGG
ATTTGCAAAACCTGATTCCAAGTGAACGTGTTTCGAAGCTCGTCAGTATTCGCTTAGAGATGCAGATTCC
TTACATGTCCAAATGGCCTCAAGCTCTTAGTATTCAAGCCCATCCGGTGAATGTTCCGACGAGTTTTAAG
CAGCGGGCGATGTTGGTTGATGAGATATGGCACACTGTTGGTGATGGAGCCTCGGATTTGGATTGGTATG
TCAAGCGCACTGTTCTTGGAGGAGTTTACTCGACCACCGAGATTTACATGCTTACAGATGACTCCCCAGA
GTATCGTGATACATGGGCATTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAGAGCATACAA
GAGGCCAAGTATTTTGCACAAGACATAGGAGCTGGAGTTGGGAAATCGTTTCAAGGACTCATGAATGGAG
TTATGCAGACCATGTCCACAAGGGGTGGTCGTAGCTCTGCGTTTTGAAGAAATATGTCACCTTCACACAA
TAAATTTGCTTTATCCTTTTATGATTATCTAGTATTTTGAGTTTGAGATGTGCTCTAATAATGATATTAG
TATGTATGACTTGAAGTGTATAAACTTTTATTCAACACGAGTCGCGAATCACTATGCTCTCTTACCCGGG
ACTGAAAGGACCAAGAAGAGATGCCTTAATGGTTTTGGTTTCTGCTGAAAGACATTACCGGGTCGTTCGT
TTTCTCGTCTGTTATTTCTTTCTAGCTGTTCCATCTATGTATTCATCTAGATTTTAAGGGGCTA