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Detail for ZS11_C05G35530.t1

Genome:
ZS11: ZS11_C05G35530.t1
ZS11_v0: BnaC03T0053300ZS
WE: WE_C02G02310.t1
WE_v0: Bnascaffold826T0000500WE
Darmor: BNapus_Darmor_BZH_scaffold_287p00090.1_BnaDAR
BH: BnaC01T364400BH
Quinta: BnaA03T0044300QU
ZS2: BnaC02T374500ZS2
SW: BnaC09T338800SW
Express61: C09p042020.1_BnaEXP
Xiaoyun: BnaC02G0383600XY
P202: BnaC01G064010P202.1
BL: BnaC01T364400BH
TA: BnaC02T256000TA
Da-Ae: Not available
RB: BnaC09T198400RB
No2127: BnaC09T0281100NO
P130: BnaC02G047720P130.1
Length: 191
KOG ID: KOG1687
KOG E-value: 1.570000e-116
KOG Score: 331.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: YP_009259583.1
NR E-value: 1.700000e-89
NR Score: 334.0
NR Annotation: YP_009259583.1 NdhK (chloroplast) [Brassica nigra]
SwissProt Protein: A4QLJ8|NDHK_LOBMA
SwissProt E-value: 2.280000e-117
SwissProt Score: 335.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Lobularia maritima OX=226051 GN=ndhK PE=3 SV=1
CDS Sequence (584 bp)
ATGAATTACATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGTTGTTGTTTTATTGAATTTACCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTA
TGGGCTAGTACCAAGATCAAGTCCTAGACAGGCAGACCTTATTTTAACAGCAGGTACAATAACAATGAAA
ATGGCTCCTTCTATTGAACAAATGCCTGAACCAAATACCGATTCTTATAGTACTGTTCGAGTGGTTGATA
AGCTAATTCATGTAGATGTCTATTTGCCGGGTTGTCCACCTAAACCAGAGACTGTTATAGACGCTATAAC
AAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGGATCGAATTAGACCTCAACGGGGTAATCAATGT
TTTACTACCAATCACAAGTTTTTTGTTGTACCCAGTACACAGACTAGAAATTATGATCAAGAATTACTCT
ATCCACCATCATCTACTTCAGAGATCTCTACTGAAACATTTTTTAAATACAAAAGCCCAGTATCTTCCCA
CGAATTAATGAATTAG
Upstream Sequence
ATGAATTACATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGTTGTTGTTTTATTGAATTTACCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTA
TGGGCTAGTACCAAGATCAAGTCCTAGACAGGCAGACCTTATTTTAACAGCAGGTACAATAACAATGAAA
ATGGCTCCTTCTATTGAACAAATGCCTGAACCAAATACCGATTCTTATAGTACTGTTCGAGTGGTTGATA
AGCTAATTCATGTAGATGTCTATTTGCCGGGTTGTCCACCTAAACCAGAGACTGTTATAGACGCTATAAC
AAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGGATCGAATTAGACCTCAACGGGGTAATCAATGT
TTTACTACCAATCACAAGTTTTTTGTTGTACCCAGTACACAGACTAGAAATTATGATCAAGAATTACTCT
ATCCACCATCATCTACTTCAGAGATCTCTACTGAAACATTTTTTAAATACAAAAGCCCAGTATCTTCCCA
CGAATTAATGAATTAG
Downstream Sequence
GTCAAGACTTTCAGCCTATGGCCGCTTCTTTATGATACCAGTTGTTGTTTTATTGAATTT
ACCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTATGGGCTAGTACCAAGATCAAGT
CCTAGACAGGCAGACCTTATTTTAACAGCAGGTACAATAACAATGAAAATGGCTCCTTCT
ATTGAACAAATGCCTGAACCAAAGTATGTTATAGTATTATATTGCTATGGGAGCGTGTAC
AATTACAGGGGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGAGTGGTTGATAAGCT
AATTCATGTAGATGTCTATTTGCCGGGTTGTCCACCTAAACCAGAGACTGTTATAGACGC
TATAACAAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGGATCGAATTAGACCTCA
ACGGGGTAATCAATGTTTTACTACCAATCACAAGTTTTTTGTTGTACCCAGTACACAGAC
TAGAAATTATGATCAAGAATTACTCTATCCACCATCATCTACTTCAGAGATCTCTACTGA
AACATTTTTTAAATACAAAAGCCCAGTATCTTCCCACGAATTAATGAATTAGGGAGGATT
TGAGAGAATAAGAAAAAAATCTTCATAAATTAGAACTCATGGTAAATGTGAAATACTTAA
ATTTATATAAAAAAGGTGTGGGGGAAATAAAAAAGATGCAGGGCACTTTGTCCGTTTGGC
TAGCCAAACGCGGGCTGGTTCATAGATCGTTGGGCTTCGATTACCAAGGAATAGAGACTT
TACAAATAAGCCCGAAGATTAGCATTCTATTGCTGTAATTTTATATGTATATGGTTAGAA
TTATTTACGTTCCCAATTTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTATA
TCATCTTACGAGAATAGAATATGGTGTTAATCAAGCGGAAGAAGTTTGCATAAAAGTATT
TACTCACAGGAGTAATcccagaattccatctattttctgggtttggaaaagtaatggATT
TTCAAGAACGGGAATCTTATGATATGTTAGCAATCACTTATGATAGCCATCCGCGGCTGA
AACGGATCTTAATGCCCAAAAGTTGGATAGGGTGGCCTTTACGTAAGGATTATATTACCC
CCAATTTTTTATGAAATACAAGATGCTTATTGAATGATAAAAAATTTGAATGATAAAAAT
GAGTCTTAGTTTCTACAACTACGGACCttcaaggaatattttgaattcggtcgttttaga
tcaaacaaacagaagaattaaggtcttattcatattATTATAGATAGCTAAATCTCCATT
TTGAAAGATACTTTTTTCCTAAAAGCCGAGCCAATAGGATGAACTAAAAAAAAGAGTTAT
GCTTTATGAACTTTATATCGCGCACATAACTTAGTCAACTTTAGTCACATAACTGGGAAT
GAATAAAAAAGATAGGAAAGCAATACAATAAATGGGGGGGGGGGGGGTTATAATTTTATT
TTCATTGTTTCTAATCTAATGAATCTTTGGGGTATTTTTTTCCTTCAACGAAAAATACTA
TAAATATAGTTAAATATAGATCTTTTTTTTTACATTTTTTTTTATTCTTTCAACCAGAAC
TTTGTATGATATATCCCACAAGACTTGTATATAATAAGAAAAGAAATCCGAGTTTGTAAA
AGTGTCGGATGAATGAAAAAAGATAATGAATTCTTGAATAACTAAAAAAAGGGTAAGGTG
TCAAACAGACTTTTTTAGGGAGTAGGTTTGGGGATAGAGGGACTTGAACCCTCATGATTT
TAAAAGTCAACGGATTTTCATCTTACTATAAATTTCATTGTTGTTAGTATTGACATGTAG
AATGAGACTCTTTCTTTATTCTCGTCTGATTAATAAGTTCCACCAAGGATCTATCAGACT
ATGATGTGAATCATTTGATTCAACACAAGGGATTAAAATCCATTTGTTAGAACAGCTTCC
ATTGAGTCTCTGCACCTATC
Pro Sequence
MNYIKFPVLDRTTKNSVISTTLNDLSNCCCFIEFTSLIGSRFDFDRYGLV
PRSSPRQADLILTAGTITMKMAPSIEQMPEPNTDSYSTVRVVDKLIHVDV
YLPGCPPKPETVIDAITKLRKKIAREIYKDRIRPQRGNQCFTTNHKFFVV
PSTQTRNYDQELLYPPSSTSEISTETFFKYKSPVSSHELMN
mRNA Sequence
ATGAATTACATTAAGTTTCCCGTACTTGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATG
ATCTTTCAAATTGTTGTTGTTTTATTGAATTTACCTCATTAATAGGCTCCCGATTTGACTTTGATCGTTA
TGGGCTAGTACCAAGATCAAGTCCTAGACAGGCAGACCTTATTTTAACAGCAGGTACAATAACAATGAAA
ATGGCTCCTTCTATTGAACAAATGCCTGAACCAAATACCGATTCTTATAGTACTGTTCGAGTGGTTGATA
AGCTAATTCATGTAGATGTCTATTTGCCGGGTTGTCCACCTAAACCAGAGACTGTTATAGACGCTATAAC
AAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGGATCGAATTAGACCTCAACGGGGTAATCAATGT
TTTACTACCAATCACAAGTTTTTTGTTGTACCCAGTACACAGACTAGAAATTATGATCAAGAATTACTCT
ATCCACCATCATCTACTTCAGAGATCTCTACTGAAACATTTTTTAAATACAAAAGCCCAGTATCTTCCCA
CGAATTAATGAATTAG