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Detail for ZS11_C05G48740.t1

Genome:
ZS11: ZS11_C05G48740.t1
ZS11_v0: BnaA07T0146200ZS.2
WE: WE_C05G50590.t1
WE_v0: BnaC05T0393200WE
Darmor: C05p47300.1_BnaDAR
BH: BnaC05T438200BH
Quinta: BnaC05T0358000QU
ZS2: BnaC07T190800ZS2
SW: BnaC05T429100SW
Express61: C05p032470.1_BnaEXP
Xiaoyun: BnaC07G0221800XY
P202: BnaA07G014410P202.1
BL: BnaC05T438200BH
TA: BnaA07T144900TA
Da-Ae: Not available
RB: BnaC05T435200RB
No2127: BnaC07T0206000NO.1
P130: BnaC09G008610P130.2
Length: 143
KOG ID: KOG2403
KOG E-value: 1.630000e-29
KOG Score: 113.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: CDY53401.1
NR E-value: 9.500000e-85
NR Score: 317.8
NR Annotation: CDY53401.1 BnaCnng25040D [Brassica napus]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: 6.920000e-29
SwissProt Score: 113.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (438 bp)
ATGTACTGGAGAGATCAAGGGAGATTTTTTACTCACTTCATCGCTTTGTCTGAGAAAAATTGTTTCTTTC
TTCTTCTATTCCCACACGTAGCAGCTAGAAGGTTTGATCATTGTGGGTTTGAGTTTGTGTCGTTTTTCTT
AAATAGATTAGAAATTGACACAAACACAAAGAAAAATGAACAATATGTGTATGTTGCTGCTCAAGGTGGT
ATAAATGATGCACTAGGAAATATGTCTGAAGATGACTGGAGATGGCACATGTATGAATATGACAGGGTCA
AAGGATGGGACTGGCTTGTAATATTGCTCCTCCTTGCAACCTTTTGTGATCAAGATGATATTCAGTACAT
GTGCAGAGATGCACCAAAAGCAGTGATTGAACTTGAGAATTATTGCCTCCCCTTTTCTCGTATTGTGTGG
CTTTGTGGTTAG
Upstream Sequence
ATGTACTGGAGAGATCAAGGGAGATTTTTTACTCACTTCATCGCTTTGTCTGAGAAAAATTGTTTCTTTC
TTCTTCTATTCCCACACGTAGCAGCTAGAAGGTTTGATCATTGTGGGTTTGAGTTTGTGTCGTTTTTCTT
AAATAGATTAGAAATTGACACAAACACAAAGAAAAATGAACAATATGTGTATGTTGCTGCTCAAGGTGGT
ATAAATGATGCACTAGGAAATATGTCTGAAGATGACTGGAGATGGCACATGTATGAATATGACAGGGTCA
AAGGATGGGACTGGCTTGTAATATTGCTCCTCCTTGCAACCTTTTGTGATCAAGATGATATTCAGTACAT
GTGCAGAGATGCACCAAAAGCAGTGATTGAACTTGAGAATTATTGCCTCCCCTTTTCTCGTATTGTGTGG
CTTTGTGGTTAG
Downstream Sequence
AGTAAATTTTGTTACATATCGCTTATAATGGAGTTTGGTTTCTTTGAAATTTGAGCTTTA
TGTGATGTGCAGGGTGGTATAAATGATGCACTAGGAAATATGTCTGAAGATGACTGGAGA
TGGCACATGTATGAATATGACAGGGTCAAAGGATGGGACTGGCTTGTAATATTGCTCCTC
CTTGCAACCTTTTGTATTAGTTAATTGATCTAGTTAGTTTGGCTATTATAAGGTTCGGTA
GTGCGTGCATTGAGCAATTATTGAGTTTTTTTTTTCTAACTTGTGTAGGTGATCAAGATG
ATATTCAGTACATGTGCAGAGATGCACCAAAAGCAGTGATTGAACTTGAGAATTATTGCC
TCCCCTTTTCTCGTATTGTGTGGCTTTGTGGTTAGATTTTGTTGGAACTTAGAACTCTTG
GTTTTGGTAATCGTTTTTGTCTAGTGTTAATACTCCTTTTAGACTTATAGTTTTCTTAGT
TCTTAGACTAGTATATTAGTAGACTGGTTGGAACTTAGATTAAGTTGAAACACGCCTAAC
TGTTCTGTTACTTTCTAATAACAACAAAGCCATTTCATACAAGCTGAAGCTGTCATTTAC
TTTGTCATTTGTCACTAATGAAATCAACATAAATCACACAATGCCCTGAAACATAAACAG
AGTATTTGGATCTGAGAAATTTCCATTTTGCTAAACTCTCTTTGGTAACAATCTTGAAAA
GAACACAAGCAAAAAACCAGAAACTTCATTTGCTAAGACAAAGATGATTCACAGTGGCGC
TTTCACGTGTTGATTTCGGTTAACGCAATCATAAAGTAATATTCATAAGAAGCTTTTTAA
CATGGTTTTTCTTTAGGTATGACCACGTTGGCTGCCATAGGTAATTCCAGCATTTGCTTA
AAGGTTGGCTTTTTGCACACATGCCCTTACTCCTAGGTGACCCGCGGGTCAACCCGCAAA
CAAAGATAACCCTTTGCGGGGCGGGCTTGGACGAGCATTCTCTGGCCGCAACCCGCCACG
GGTCAACCCGTCTGACAACTCTATTGACTTCTCTCCCTTCATCTGCTTGTATGGTTCTGA
GCTTAAGACAAAACCAGAATTCTTAACTGGAGTTTAAATCCAAAAGTAAAACATAGATAG
ATATAAAGCTTGGGAGTCAAGTATCTAACCAATCATTTTAAGTAACATATATAGCTGATT
ATATCTCCTTGTGGCCAATAAGATTACATCCCAACGACAAATAAAGTGTCCGTGGCAAAG
AAAATAACAAGTGCTCAGCGCATAACTTGATGATAAATAATTAGGTCATGAAAACATAAA
TAAGAAGTGATTTGAATATAAAAACACATTTTAATGTTACTGAAGACGACAAATAGTTTT
AGAAAGAAGAAAAAGAGAGTGATAAACTTGGAAAATAAGGAATAGCCAAGCCATAGTAAC
CAGAATAATACAAATGATAAACAGTCGAGTCAGGATCAAGATCAAAGTCAACAAGGCTTC
CTTGATAGGTAAGCGAGAGGACGACTTTATTGTTATCCCTGGAAATGGCCAAAGGTGTGA
GAGGCTGTGAAGTGATACCACCAAACCAACAGGAAGTAGAATTCATGTCAACTGAGAAGA
TTCTCTCCCACTTGTTGCATTCTTCAACCCTCCACCAAAACTCTTGCTTACAATCTCCCT
TGAGCTCAGAAATGCAGAGACGACCGTTAAGATTACATAAACCAATTTTGTCACTAGAGG
CATCAGGGGTAATAAAAGGTGGTGTTGAGGTGACTTGAAACATCTCTGTATGAATATCGA
AAACTATGAGTTTGGTTTGTGTTGATGGGTATCCTTGTTCATCTCCCGTGAGCCAGTATA
ATAATCCGTTTGCACACGGTGGCCTCTGATTAGACAAGATTTGGTGATGATCAAGAGGTC
TGGTAGTCACGAATCTCCATCTCCGTTCCTCTAAATCGAAAACCTCGCATCTTGTCTTCT
TCTTCTTGTTCAAGGTAGCA
Pro Sequence
MYWRDQGRFFTHFIALSEKNCFFLLLFPHVAARRFDHCGFEFVSFFLNRL
EIDTNTKKNEQYVYVAAQGGINDALGNMSEDDWRWHMYEYDRVKGWDWLV
ILLLLATFCDQDDIQYMCRDAPKAVIELENYCLPFSRIVWLCG
mRNA Sequence
ATGTACTGGAGAGATCAAGGGAGATTTTTTACTCACTTCATCGCTTTGTCTGAGAAAAATTGTTTCTTTC
TTCTTCTATTCCCACACGTAGCAGCTAGAAGGTTTGATCATTGTGGGTTTGAGTTTGTGTCGTTTTTCTT
AAATAGATTAGAAATTGACACAAACACAAAGAAAAATGAACAATATGTGTATGTTGCTGCTCAAGGTGGT
ATAAATGATGCACTAGGAAATATGTCTGAAGATGACTGGAGATGGCACATGTATGAATATGACAGGGTCA
AAGGATGGGACTGGCTTGTAATATTGCTCCTCCTTGCAACCTTTTGTGATCAAGATGATATTCAGTACAT
GTGCAGAGATGCACCAAAAGCAGTGATTGAACTTGAGAATTATTGCCTCCCCTTTTCTCGTATTGTGTGG
CTTTGTGGTTAG