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Detail for ZS11_C05G48780.t1

Genome:
ZS11: ZS11_C05G48780.t1
ZS11_v0: BnaC05T0416000ZS
WE: WE_C05G50630.t1
WE_v0: BnaA01T0240900WE
Darmor: C05p47340.1_BnaDAR
BH: BnaC05T438600BH
Quinta: BnaC05T0358300QU
ZS2: BnaC05T394100ZS2
SW: BnaC05T429600SW
Express61: C05p032510.1_BnaEXP
Xiaoyun: BnaC05G0413500XY
P202: BnaA05G023280P202.1
BL: BnaC05T438600BH
TA: BnaC05T401800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g30770D
RB: BnaC05T435700RB
No2127: BnaA01T0275600NO
P130: BnaC05G050490P130.1
Length: 106
KOG ID: KOG4009
KOG E-value: 8.430000e-74
KOG Score: 215.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03966 NDUFB10; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
NR Protein: XP_022561044.1
NR E-value: 4.300000e-58
NR Score: 228.8
NR Annotation: XP_022561044.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Brassica napus]
SwissProt Protein: Q94C12|NDBAB_ARATH
SwissProt E-value: 3.580000e-73
SwissProt Score: 215.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis thaliana OX=3702 GN=At3g18410 PE=3 SV=1
CDS Sequence (325 bp)
ATGGGGAGAAAGAAGGGATTGCCGGAGTTCGAAGAGACGGCGCCGGATGGATTTGATCCGGAGAATCCGT
ACAAGGATCCGGTGGCGATGGTGGAGATGAGAGAGCACATCGTTAGGGAGAAGTGGATCCAAATAGAGAA
GGCTAAGATCTTGAGGGAGAAGGTGAAATGGTGTTACCGCGTGGAAGGCGTCAACCACTACCAGAAATGC
CGTCTTCTCGTACAGCAGTATCTCGACTCCACTCGCGGCGTCGGCTGGGGAAAAGACCACCGTCCTATCT
CCCTCCACGGTCCCAAGCCTGAGGCTGTTGATGCTGAATAA
Upstream Sequence
GTCCCAACTAAAAATCAATCGACGAAAGAGAAGAGAGAAGCAGCAATGGGGAGAAAGAAGGGATTGCCGG
AGTTCGAAGAGACGGCGCCGGATGGATTTGATCCGGAGAATCCGTACAAGGATCCGGTGGCGATGGTGGA
GATGAGAGAGCACATCGTTAGGGAGAAGTGGATCCAAATAGAGAAGGCTAAGATCTTGAGGGAGAAGGTG
AAATGGTGTTACCGCGTGGAAGGCGTCAACCACTACCAGAAATGCCGTCTTCTCGTACAGCAGTATCTCG
ACTCCACTCGCGGCGTCGGCTGGGGAAAAGACCACCGTCCTATCTCCCTCCACGGTCCCAAGCCTGAGGC
TGTTGATGCTGAATAACAACGCTTTGCGTCTGATCAATTTGAGGCGAGGAACTAGTTCAGGGTGGCCGAG
CTTTTAGCACAAGACATGAAATGGTCTTTGGACTGTGCAGATTTGCTCTTGTTTTCTTTTTTCTGTTCTT
TTGGAAACATAGTCTTTGGACTGTAGATTCATGTAAACGTTTGTACGAGCTTGAGTAATGTATTGCTACA
CTCAACAGTCAATATTAGTCTCTCGTTATCAAATA
Downstream Sequence
GGTGAGTGATGTTGTCTTTGATGAAACGTTTTATTCGATTCCTTTGGTTGATAAAATGGA
CTGTCATCATGATTAAGGGTTTTTGGTTGATGTTAATGATCAGGTCCCAAGCCTGAGGCT
GTTGATGCTGAATAACAACGCTTTGCGTCTGATCAATTTGAGGCGAGGAACTAGTTCAGG
GTTATGCTTCATGTTTCTACAACAAGCATTGGTTTTTTATTACATATGTTCAATAAACTT
AAAGAATATTGTAAGAAAGATTTGGGCTCTAGATTGGTTTGAAATGATAATGGTGTGATG
CTTTATGGTTTAGTTATGGTTTTTTCAGATATGAAACTGTAAGAGTCTCCTCCATACTTG
TCTTAAACTAGAAGTATGTGTCCTGTTAATCAAATTGACAAGCCTCTTTGTCTCTTAAGA
ACAACTAAAGTGGTTAGTAACTGTTTGTATTTTTCTGTAACGAAAGAAACTGTAGTGCAA
AGTGTGAATGTCTCTCATATAATTCACTCATGACATGCTGGAGTAGCTCTTAGTTGAGGT
ATTTAGGAATGAATACTCTAGCTTTGTGTTAGTCTGCTATGTTCTCATACTCCACGGTCT
CCACCACAAAGCCAATCCTAGAAATGGGTGTATTGTGATATTATGACCGATGAACCCAAC
TTGTGCAAAGTTCTTACGTAGTGTTGTATAGTCTTTGTGAACTTGAGTCATGGTAAATGA
TGGCAAACGTTACATCATTAGAAGCCGGACTGATTAGTATTCTTCACAGCTTCTGGTTTC
ACTATTATAATAACGAGCGTACCGATCCAAATGTTCTTTTTCTTGTGATGCAGGTGGCCG
AGCTTTTAGCACAAGACATGAAATGGTCTTTGGACTGTGCAGATTTGCTCTTGTTTTCTT
TTTTCTGTTCTTTTGGAAACATAGTCTTTGGACTGTAGATTCATGTAAACGTTTGTACGA
GCTTGAGTAATGTATTGCTACACTCAACAGTCAATATTAGTCTCTCGTTATCAAATAAGT
CTCTTTTTCCACTGTGTTATTATTATGATGCCAAATAAATAATTCATAGGATTAAACAAA
AAATAAATCACAAATTCATACGTTTAAAAAAAAAATTCATTTTGCTTTATAAGTAACTCC
AACGTAATCCTCTCAGGAAAACAATCTAGTCTTCCGTGTCTTATTCTTCAGATATGAGAA
CTATACTAAGTTACTAACTCAAACTCAATTATCTTCACCACTACCAAAGAGCTTCATCTT
AGACAATGGCGTCCTCAAATACCCTTCAACTTCAAACTTCTTTGGcgaaagctctctata
ctcgctttaaaccgctccttggcttcagcattcttgtcaagcaaactataaatcatacct
cggcgaaatacggtctgaaatccttaggatcctctctcgtcagctgctcgtagctcttca
acgcttcatccACAGTCTTCTGCAAGAACTGTATCTGCGCAATGATCAGCCTCACGTCTC
TAATCTCCTTCACCATATTCTCAGCTTCAGCTACAGCCAACGCGTCTTCCAGCCTCTGCA
GCACCGCGTCTCCTTCCCCGGACCTGTCCATGAGCAACGCGTTCTCGAACAAGGCCTCGA
ACGAGAGTGGGTTTCGTTGGAGAATTTCCTCGAACACTTGGCGTGCGTTTTCGGTACGAC
CCATTTCACCCAATAGCCTCGCCATTAAAAACTTCCACTCTGTTTCCTCTGGCTGTGCGG
TTACGAGCTTCTCTAAGAGCTTGAGAGCTTCTTCGTCTTCTCCGTTCTCTAGCTTCTGCT
GAAGCAGTGATCTCAGCGTTTTGACCGCCTCTGGAGTGGATTCTAGAAGCTCGGTTAATG
GCGAAGTGGGTTCGATCTCAGACGAATTTTTCTCTTCTTTCACTTCCACGGTGGTCGTGA
CCGGAGACCCTGCTTTCGCCGGTAAAGTTGAGAGCTTTCCGGTCATGGAAACAGCAGCTC
CGATCAGAATCGCCGATTTG
Pro Sequence
MGRKKGLPEFEETAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKI
LREKVKWCYRVEGVNHYQKCRLLVQQYLDSTRGVGWGKDHRPISLHGPKP
EAVDAE
mRNA Sequence
GTCCCAACTAAAAATCAATCGACGAAAGAGAAGAGAGAAGCAGCAATGGGGAGAAAGAAGGGATTGCCGG
AGTTCGAAGAGACGGCGCCGGATGGATTTGATCCGGAGAATCCGTACAAGGATCCGGTGGCGATGGTGGA
GATGAGAGAGCACATCGTTAGGGAGAAGTGGATCCAAATAGAGAAGGCTAAGATCTTGAGGGAGAAGGTG
AAATGGTGTTACCGCGTGGAAGGCGTCAACCACTACCAGAAATGCCGTCTTCTCGTACAGCAGTATCTCG
ACTCCACTCGCGGCGTCGGCTGGGGAAAAGACCACCGTCCTATCTCCCTCCACGGTCCCAAGCCTGAGGC
TGTTGATGCTGAATAACAACGCTTTGCGTCTGATCAATTTGAGGCGAGGAACTAGTTCAGGGTGGCCGAG
CTTTTAGCACAAGACATGAAATGGTCTTTGGACTGTGCAGATTTGCTCTTGTTTTCTTTTTTCTGTTCTT
TTGGAAACATAGTCTTTGGACTGTAGATTCATGTAAACGTTTGTACGAGCTTGAGTAATGTATTGCTACA
CTCAACAGTCAATATTAGTCTCTCGTTATCAAATA