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Detail for ZS11_C05G56210.t1

Genome:
ZS11: ZS11_C05G56210.t1
ZS11_v0: BnaC03T0392900ZS
WE: WE_C05G58370.t1
WE_v0: BnaC03T0325800WE
Darmor: C03p45540.1_BnaDAR
BH: BnaC03T418400BH
Quinta: BnaA03T0315200QU
ZS2: BnaC03T396300ZS2
SW: BnaC03T407200SW
Express61: C05p039360.2_BnaEXP
Xiaoyun: BnaC05G0486800XY
P202: BnaC03G049570P202.1
BL: BnaC03T418400BH
TA: BnaC01T446800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g34900D
RB: BnaA01T395200RB
No2127: BnaC03T0313500NO
P130: BnaC03G037070P130.1
Length: 133
KOG ID: KOG3426
KOG E-value: 1.910000e-94
KOG Score: 269.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
NR Protein: XP_013731751.1
NR E-value: 2.100000e-70
NR Score: 270.0
NR Annotation: XP_013731751.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like [Brassica napus]
SwissProt Protein: Q9LHI0|NDUA6_ARATH
SwissProt E-value: 8.110000e-94
SwissProt Score: 269.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=2 SV=1
CDS Sequence (407 bp)
ATGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCTAACCTGACGGAGGCTCGCC
GCCGTGTTTTCGATTTCTTCAGAGCTGCGTGTAGATCCCTCCCCACCGTAATGGACATTTACAATCTACA
AGATGTCGTCGCGCCTTCTCAGCTCCGCTTTGCGATCTCTGCTCAGATTCGTAATAACGCTCACGTCACC
GATCCTAAGGTAATTGATCTTCTGTTATTCAAGGGAATGGAAGAGCTTACTGACATTGTGGATCACGCAA
AGCAGCGTCACCACATTATTGGTCAGTACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGA
TCAAGGGAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTGA
Upstream Sequence
TCGGCGTCAAAAGACGTCGTTGACTGTTCAGATGTTTACTCTGTTTTTATCTCAGGAAGAGAAGGAAAGA
CTCTCTCTCTTGAGCGATTCACCAGCGTAAGATCAATCAGATGGCAGCACCTTTCACGTTGAGGAAGATC
GGAGTTCCGCCGAACTCAGCTAACCTGACGGAGGCTCGCCGCCGTGTTTTCGATTTCTTCAGAGCTGCGT
GTAGATCCCTCCCCACCGTAATGGACATTTACAATCTACAAGATGTCGTCGCGCCTTCTCAGCTCCGCTT
TGCGATCTCTGCTCAGATTCGTAATAACGCTCACGTCACCGATCCTAAGGTAATTGATCTTCTGTTATTC
AAGGGAATGGAAGAGCTTACTGACATTGTGGATCACGCAAAGCAGCGTCACCACATTATTGGTCAGTACG
TGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGATCAAGGGAAGTCTGATTTTCTCAAGAACTT
CTACACCAGCAACTACTTTTGAGCTGGTGATTGTTTTTCTCTACTGGATTTACCAAATTCAAGAATAATT
AGACATTTTCATTTGTATTAATTTCGCCAA
Downstream Sequence
GCATTTCCCCTAATCTCACTCTCATTGGTTACCACATCGACACGAAACATTTGAACGGTT
TCCTGTATTGTTAAGCTGATTGCTTCATTGATGTTTAGGAGATCAGTCTTTACTTCCTAT
TGCGATTTTGACTTTTTTTTTAACTGTCATCTATGTTTGAAAGTTGAAAGCTTTATCCTC
TGGGTGGGTGGAGATTTGCTCAGAGCTGAAAGGTGGGAGCTTTACACCGTTACTTAATGT
TAAAGCTGTGCTACCTCGTGGTTCCTTCTGTATGTGAAGGATTAATAGATTCTTTCTCTT
TAGTAGTACCCTGTGTTAAGATTTGGTTGTGTGGCAATCTGTTTGAGTTTTGAACTATTA
GTTGAAGGCAGCTTTCTTGTGTCTTTGGATGCATTGGTCTCGTGTTGTTTTGGTTCTCTT
TTTAGAATGCAATGTAAAGTATTCCTGATGATAGTTCGTTGCTTCTGCAGGTAATTGATC
TTCTGTTATTCAAGGGAATGGAAGAGCTTACTGACATTGTGGATCACGCAAAGCAGCGTC
ACCACATTATTGGTCAGTACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGG
ATCAAGGGAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTGAGCTGGTG
ATTGTTTTTCTCTACTGGATTTACCAAATTCAAGAATAATTAGACATTTTCATTTGTATT
AATTTCGCCAAACATTCAAGTTTTATCTGTGACAGTGTTAGCTGCGCAAACAATGCTATG
ATTTCAAGGTACATAATCAGCTCTCTTTTCTTTCCAACTCTTAATGTAAACTGAATGTCT
ATTTGACTTATGATTATCATACAATCCAAATTCCTGAAATTATCCCATCTTCTGTCATGT
TGGTTGCTAAGATCTTGCACTGATGATCTAAACATTCACTCTCTATAAACTACACAACCT
GATTGGCTAAAGATTACAACACACACAACAATCTAAGGAAACCATTTCTAAATCTGTATC
TTCTTTCCCAAAAATATTGCTTTTGGTAAGAATCTGAGAAGGCCTTGCTTTGTGATCTCT
CTCTCTCTCTCTCTCTCTCTCTTGGAAGGAGTGTCCCTACCGTACAATTATGTATAGAGC
TGAGCAACGCACTATTCTCGTGTGTTCACTCTCTTGGCCTGGCAAGCCACAAGGAACTAA
GGGCCCGTAGTCGAGATGAATAATCATGTATAGCAAGAAGAGCACGAGCTGACTGACGCG
TTGTTAACACTCTAATCATCTGTTGCAGTGTTTGCAGCCTCAAGTTATCAGCCTGTCACC
AAGAAATGCATGCCCTATGAACTCCAATAACAGACAGAGATACCTATGCATAAGATTTAT
CTCTTTTCATTACAGGATATATCTAACGAACATACATTCGCATTCCAAATGTACCTGGCG
GATAAAGCCTTCGAGTGTGCCTAATTGCCCCATTGCCATGGCCATCTGACCCATGTAGCT
CGCAACATTATCAGACGAACATGAACCAAGAGTTCCACTAGACAAAGTCTCAGCTAACGA
TTGCTGTAAACTCTCCATCCCTTGAGATAACGCATCTTCAGCCTGCTGGGACGTCTGCTG
CAAGCTGTTGATGCCCAACACCTGTCGCTCTGTCATTGGCTCCAGCTGATTCGCAAGAAG
CTGTTGTAAAAGTTTTGACCCGTTAGAGTTGGTTTGTTTTAGACCATCCAATGAACTTAT
ATCTCACCTTGAGAAGTTCTGATGAACGGAACCCGCCAAGCCACAAGAAACATCTCTCAG
CTGGCGTTTTCCACATTCCAGATAGTATATGGAAGACATCGTTCTTAGCTGCATTGCTTT
TAATCCTGAAAAGCTCCTCATAGTGAGCCATCACTCCATCCACAATTGTCCGGAGCTCGG
TATCACCAGCGTGAGCATTCAGAGCAGATCTCAGCTCGTTCATTTGCCTGTTCTTTTCTT
CAAGCCATCGTGAATATTCG
Pro Sequence
MAAPFTLRKIGVPPNSANLTEARRRVFDFFRAACRSLPTVMDIYNLQDVV
APSQLRFAISAQIRNNAHVTDPKVIDLLLFKGMEELTDIVDHAKQRHHII
GQYVVGEGLVQNTGSKDQGKSDFLKNFYTSNYF
mRNA Sequence
TCGGCGTCAAAAGACGTCGTTGACTGTTCAGATGTTTACTCTGTTTTTATCTCAGGAAGAGAAGGAAAGA
CTCTCTCTCTTGAGCGATTCACCAGCGTAAGATCAATCAGATGGCAGCACCTTTCACGTTGAGGAAGATC
GGAGTTCCGCCGAACTCAGCTAACCTGACGGAGGCTCGCCGCCGTGTTTTCGATTTCTTCAGAGCTGCGT
GTAGATCCCTCCCCACCGTAATGGACATTTACAATCTACAAGATGTCGTCGCGCCTTCTCAGCTCCGCTT
TGCGATCTCTGCTCAGATTCGTAATAACGCTCACGTCACCGATCCTAAGGTAATTGATCTTCTGTTATTC
AAGGGAATGGAAGAGCTTACTGACATTGTGGATCACGCAAAGCAGCGTCACCACATTATTGGTCAGTACG
TGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGATCAAGGGAAGTCTGATTTTCTCAAGAACTT
CTACACCAGCAACTACTTTTGAGCTGGTGATTGTTTTTCTCTACTGGATTTACCAAATTCAAGAATAATT
AGACATTTTCATTTGTATTAATTTCGCCAA